RNA–Protein interactions for RNA: ENST00000569747.5

KLHDC4-226, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-226ENST00000569747 NISCHQ9Y2I1 1504 aa34.21■■■■□ 3.07
KLHDC4-226ENST00000569747 CCDC180Q9P1Z9 1646 aa30.72■■■□□ 2.51
KLHDC4-226ENST00000569747 ABCC9O60706 1549 aa30.47■■■□□ 2.47
KLHDC4-226ENST00000569747 RB1CC1Q8TDY2 1594 aa29.12■■■□□ 2.25
KLHDC4-226ENST00000569747 NACADO15069 1562 aa28.96■■■□□ 2.23
KLHDC4-226ENST00000569747 MYO15BQ96JP2 1530 aa28.64■■■□□ 2.18
KLHDC4-226ENST00000569747 DCAF8L2P0C7V8 631 aa28.62■■■□□ 2.17
KLHDC4-226ENST00000569747 UNC13AQ9UPW8 1703 aa28.52■■■□□ 2.16
KLHDC4-226ENST00000569747 DNAJC5BQ9UF47 199 aa28.45■■■□□ 2.14
KLHDC4-226ENST00000569747 ZCCHC6Q5VYS8 1495 aaKnown RBP28.41■■■□□ 2.14
KLHDC4-226ENST00000569747 PABPN1Q86U42 306 aaKnown RBP eCLIP28.33■■■□□ 2.13
KLHDC4-226ENST00000569747 DCAF1Q9Y4B6 1507 aa28.32■■■□□ 2.12
KLHDC4-226ENST00000569747 BICRAQ9NZM4 1560 aa28.3■■■□□ 2.12
KLHDC4-226ENST00000569747 SHROOM4Q9ULL8 1493 aa27.96■■■□□ 2.07
KLHDC4-226ENST00000569747 SCRIBQ14160 1630 aa27.92■■■□□ 2.06
KLHDC4-226ENST00000569747 CC2D2AQ9P2K1 1620 aa27.59■■■□□ 2.01
KLHDC4-226ENST00000569747 EIF4G1Q04637 1599 aaKnown RBP27.57■■■□□ 2
KLHDC4-226ENST00000569747 CECR2Q9BXF3 1484 aa27.46■■□□□ 1.99
KLHDC4-226ENST00000569747 NCAPD3P42695 1498 aa26.72■■□□□ 1.87
KLHDC4-226ENST00000569747 SMARCA4P51532 1647 aa26.68■■□□□ 1.86
KLHDC4-226ENST00000569747 ATAD2BQ9ULI0 1458 aa26.65■■□□□ 1.86
KLHDC4-226ENST00000569747 SMARCA2P51531 1590 aa26.6■■□□□ 1.85
KLHDC4-226ENST00000569747 HMGXB3Q12766 1538 aa26.58■■□□□ 1.85
KLHDC4-226ENST00000569747 BAZ1AQ9NRL2 1556 aaPredicted RBP26.55■■□□□ 1.84
KLHDC4-226ENST00000569747 PEG3Q9GZU2 1588 aa26.46■■□□□ 1.83
KLHDC4-226ENST00000569747 BAZ1BQ9UIG0 1483 aaKnown RBP26.39■■□□□ 1.82
KLHDC4-226ENST00000569747 MROH2BQ7Z745 1585 aa26.36■■□□□ 1.81
KLHDC4-226ENST00000569747 ERCC6Q03468 1493 aa26.3■■□□□ 1.8
KLHDC4-226ENST00000569747 CUX2O14529 1486 aa26.28■■□□□ 1.8
KLHDC4-226ENST00000569747 NESP48681 1621 aa26.24■■□□□ 1.79
KLHDC4-226ENST00000569747 LAMC3Q9Y6N6 1575 aa26.12■■□□□ 1.77
KLHDC4-226ENST00000569747 WIZO95785 1651 aa26.05■■□□□ 1.76
KLHDC4-226ENST00000569747 DNAJC5Q9H3Z4 198 aa26.04■■□□□ 1.76
KLHDC4-226ENST00000569747 THOC2Q8NI27 1593 aaKnown RBP26.02■■□□□ 1.76
KLHDC4-226ENST00000569747 KIF21AQ7Z4S6 1674 aa25.96■■□□□ 1.75
KLHDC4-226ENST00000569747 PDS5BQ9NTI5 1447 aa25.91■■□□□ 1.74
KLHDC4-226ENST00000569747 CADPSQ9ULU8 1353 aa25.88■■□□□ 1.73
KLHDC4-226ENST00000569747 RSF1Q96T23 1441 aaPredicted RBP25.84■■□□□ 1.73
KLHDC4-226ENST00000569747 TOP2AP11388 1531 aaKnown RBP25.75■■□□□ 1.71
KLHDC4-226ENST00000569747 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
KLHDC4-226ENST00000569747 WDR62O43379 1518 aa25.68■■□□□ 1.7
KLHDC4-226ENST00000569747 CFTRP13569 1480 aa25.65■■□□□ 1.7
KLHDC4-226ENST00000569747 CEP164Q9UPV0 1460 aa25.62■■□□□ 1.69
KLHDC4-226ENST00000569747 FANCD2Q9BXW9 1451 aa25.6■■□□□ 1.69
KLHDC4-226ENST00000569747 PRDM2Q13029 1718 aa25.48■■□□□ 1.67
KLHDC4-226ENST00000569747 CCDC88BA6NC98 1476 aa25.4■■□□□ 1.66
KLHDC4-226ENST00000569747 URB2Q14146 1524 aaKnown RBP25.4■■□□□ 1.66
KLHDC4-226ENST00000569747 TOPBP1Q92547 1522 aa25.14■■□□□ 1.62
KLHDC4-226ENST00000569747 IFT140Q96RY7 1462 aa25.11■■□□□ 1.61
KLHDC4-226ENST00000569747 ABCC8Q09428 1581 aa25.09■■□□□ 1.61
KLHDC4-226ENST00000569747 DNMBPQ6XZF7 1577 aa25.09■■□□□ 1.61
KLHDC4-226ENST00000569747 ZNF608Q9ULD9 1512 aaPredicted RBP25.05■■□□□ 1.6
KLHDC4-226ENST00000569747 OSCARQ8IYS5 282 aa24.99■■□□□ 1.59
KLHDC4-226ENST00000569747 EIF4G3O43432 1585 aaKnown RBP24.97■■□□□ 1.59
KLHDC4-226ENST00000569747 TARBP1Q13395 1621 aaKnown RBP24.94■■□□□ 1.58
KLHDC4-226ENST00000569747 POLA1P09884 1462 aaPredicted RBP24.89■■□□□ 1.58
KLHDC4-226ENST00000569747 TRIM41Q8WV44 630 aa24.88■■□□□ 1.57
KLHDC4-226ENST00000569747 AQRO60306 1485 aaKnown RBP eCLIP24.81■■□□□ 1.562e-8■■■□□ 18.4
KLHDC4-226ENST00000569747 CUX1P39880 1505 aa24.77■■□□□ 1.56
KLHDC4-226ENST00000569747 RAD54L2Q9Y4B4 1467 aa24.77■■□□□ 1.56
KLHDC4-226ENST00000569747 CHD1O14646 1710 aa24.76■■□□□ 1.55
KLHDC4-226ENST00000569747 RIMBP3CA6NJZ7 1639 aa24.75■■□□□ 1.55
KLHDC4-226ENST00000569747 RIMBP3BA6NNM3 1639 aa24.75■■□□□ 1.55
KLHDC4-226ENST00000569747 RIMBP3Q9UFD9 1639 aa24.75■■□□□ 1.55
KLHDC4-226ENST00000569747 FGD5Q6ZNL6 1462 aa24.75■■□□□ 1.55
KLHDC4-226ENST00000569747 WDR97A6NE52 1622 aa24.73■■□□□ 1.55
KLHDC4-226ENST00000569747 SOGA1O94964 1423 aa24.73■■□□□ 1.55
KLHDC4-226ENST00000569747 ARHGEF11O15085 1522 aa24.68■■□□□ 1.54
KLHDC4-226ENST00000569747 TDRD9Q8NDG6 1382 aaKnown RBP24.66■■□□□ 1.54
KLHDC4-226ENST00000569747 SUPT5HO00267 1087 aaKnown RBP24.65■■□□□ 1.54
KLHDC4-226ENST00000569747 SNAPC4Q5SXM2 1469 aa24.6■■□□□ 1.53
KLHDC4-226ENST00000569747 MAGI1Q96QZ7 1491 aaPredicted RBP24.56■■□□□ 1.52
KLHDC4-226ENST00000569747 GRIN2BQ13224 1484 aa24.54■■□□□ 1.52
KLHDC4-226ENST00000569747 FBLN2P98095 1184 aa24.53■■□□□ 1.52
KLHDC4-226ENST00000569747 PBRM1Q86U86 1689 aa24.51■■□□□ 1.51
KLHDC4-226ENST00000569747 ABCA10Q8WWZ4 1543 aa24.5■■□□□ 1.51
KLHDC4-226ENST00000569747 CLASP1Q7Z460 1538 aa24.49■■□□□ 1.51
KLHDC4-226ENST00000569747 ABCA5Q8WWZ7 1642 aa24.48■■□□□ 1.51
KLHDC4-226ENST00000569747 GAPVD1Q14C86 1478 aa24.46■■□□□ 1.51
KLHDC4-226ENST00000569747 SYNJ2O15056 1496 aa24.45■■□□□ 1.51
KLHDC4-226ENST00000569747 ARAP1Q96P48 1450 aa24.45■■□□□ 1.51
KLHDC4-226ENST00000569747 SYNJ1O43426 1573 aa24.45■■□□□ 1.5
KLHDC4-226ENST00000569747 BIVM-ERCC5R4GMW8 1640 aa24.43■■□□□ 1.5
KLHDC4-226ENST00000569747 TOP2BQ02880 1626 aa24.42■■□□□ 1.5
KLHDC4-226ENST00000569747 CHMP7Q8WUX9 453 aaPredicted RBP24.4■■□□□ 1.5
KLHDC4-226ENST00000569747 WRNQ14191 1432 aaPredicted RBP eCLIP24.37■■□□□ 1.49
KLHDC4-226ENST00000569747 CYB5RLQ6IPT4 315 aa24.37■■□□□ 1.49
KLHDC4-226ENST00000569747 ADAMTS12P58397 1594 aa24.29■■□□□ 1.48
KLHDC4-226ENST00000569747 GRIN2AQ12879 1464 aa24.24■■□□□ 1.47
KLHDC4-226ENST00000569747 ERICH3Q5RHP9 1530 aa24.2■■□□□ 1.46
KLHDC4-226ENST00000569747 NUP160Q12769 1436 aa24.18■■□□□ 1.46
KLHDC4-226ENST00000569747 FHAD1B1AJZ9 1412 aa24.17■■□□□ 1.46
KLHDC4-226ENST00000569747 CEP170Q5SW79 1584 aa24.16■■□□□ 1.46
KLHDC4-226ENST00000569747 SHROOM2Q13796 1616 aa24.09■■□□□ 1.45
KLHDC4-226ENST00000569747 ERCC6L2Q5T890 1561 aa24.08■■□□□ 1.45
KLHDC4-226ENST00000569747 TRHP20396 242 aaPredicted RBP24.03■■□□□ 1.44
KLHDC4-226ENST00000569747 RUSC2Q8N2Y8 1516 aa23.94■■□□□ 1.42
KLHDC4-226ENST00000569747 CUL7Q14999 1698 aa23.89■■□□□ 1.41
KLHDC4-226ENST00000569747 KIF27Q86VH2 1401 aa23.88■■□□□ 1.41
KLHDC4-226ENST00000569747 PRG4Q92954 1404 aaPredicted RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms