RNA–Protein interactions for RNA: ENST00000566661.5

KLHDC4-217, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 2,232 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-217ENST00000566661 NISCHQ9Y2I1 1504 aa37.53■■■■□ 3.6
KLHDC4-217ENST00000566661 CCDC180Q9P1Z9 1646 aa32.35■■■□□ 2.77
KLHDC4-217ENST00000566661 ZCCHC6Q5VYS8 1495 aaKnown RBP31.61■■■□□ 2.65
KLHDC4-217ENST00000566661 SHROOM4Q9ULL8 1493 aa31.27■■■□□ 2.6
KLHDC4-217ENST00000566661 DCAF8L2P0C7V8 631 aa31.12■■■□□ 2.57
KLHDC4-217ENST00000566661 DCAF1Q9Y4B6 1507 aa30.88■■■□□ 2.53
KLHDC4-217ENST00000566661 ABCC9O60706 1549 aa30.41■■■□□ 2.46
KLHDC4-217ENST00000566661 SUPT5HO00267 1087 aaKnown RBP30.32■■■□□ 2.45
KLHDC4-217ENST00000566661 MYO15BQ96JP2 1530 aa30.29■■■□□ 2.44
KLHDC4-217ENST00000566661 SCRIBQ14160 1630 aa30.05■■■□□ 2.4
KLHDC4-217ENST00000566661 NACADO15069 1562 aa30.04■■■□□ 2.4
KLHDC4-217ENST00000566661 RB1CC1Q8TDY2 1594 aa29.69■■■□□ 2.34
KLHDC4-217ENST00000566661 RSF1Q96T23 1441 aaPredicted RBP29.38■■■□□ 2.29
KLHDC4-217ENST00000566661 CECR2Q9BXF3 1484 aa29.26■■■□□ 2.27
KLHDC4-217ENST00000566661 UNC13AQ9UPW8 1703 aa29.22■■■□□ 2.27
KLHDC4-217ENST00000566661 CHIC1Q5VXU3 224 aa29.21■■■□□ 2.27
KLHDC4-217ENST00000566661 MROH2BQ7Z745 1585 aa29.1■■■□□ 2.25
KLHDC4-217ENST00000566661 WIZO95785 1651 aa28.91■■■□□ 2.22
KLHDC4-217ENST00000566661 BAZ1AQ9NRL2 1556 aaPredicted RBP28.89■■■□□ 2.22
KLHDC4-217ENST00000566661 BICRAQ9NZM4 1560 aa28.89■■■□□ 2.21
KLHDC4-217ENST00000566661 PABPN1Q86U42 306 aaKnown RBP eCLIP28.88■■■□□ 2.21
KLHDC4-217ENST00000566661 SMARCA4P51532 1647 aa28.74■■■□□ 2.19
KLHDC4-217ENST00000566661 TOP2AP11388 1531 aaKnown RBP28.49■■■□□ 2.15
KLHDC4-217ENST00000566661 HRCP23327 699 aa28.49■■■□□ 2.15
KLHDC4-217ENST00000566661 TRIM41Q8WV44 630 aa28.36■■■□□ 2.13
KLHDC4-217ENST00000566661 CCDC88BA6NC98 1476 aa28.31■■■□□ 2.12
KLHDC4-217ENST00000566661 SMARCA2P51531 1590 aa28.3■■■□□ 2.12
KLHDC4-217ENST00000566661 PEG3Q9GZU2 1588 aa28.28■■■□□ 2.12
KLHDC4-217ENST00000566661 EIF4G1Q04637 1599 aaKnown RBP28.25■■■□□ 2.11
KLHDC4-217ENST00000566661 LOC105371045A0A1W2PR82 267 aa28.24■■■□□ 2.11
KLHDC4-217ENST00000566661 PCGF6Q9BYE7 350 aa28.23■■■□□ 2.11
KLHDC4-217ENST00000566661 ATAD2BQ9ULI0 1458 aa28.16■■■□□ 2.1
KLHDC4-217ENST00000566661 BAZ1BQ9UIG0 1483 aaKnown RBP28.03■■■□□ 2.08
KLHDC4-217ENST00000566661 FAM9AQ8IZU1 332 aaPredicted RBP28.02■■■□□ 2.08
KLHDC4-217ENST00000566661 ABCC8Q09428 1581 aa27.96■■■□□ 2.07
KLHDC4-217ENST00000566661 TRIM26Q12899 539 aaPredicted RBP27.89■■■□□ 2.06
KLHDC4-217ENST00000566661 NCAPD3P42695 1498 aa27.77■■■□□ 2.04
KLHDC4-217ENST00000566661 HMGXB3Q12766 1538 aa27.73■■■□□ 2.03
KLHDC4-217ENST00000566661 EHMT2Q96KQ7 1210 aa27.73■■■□□ 2.03
KLHDC4-217ENST00000566661 WRNQ14191 1432 aaPredicted RBP eCLIP27.61■■■□□ 2.01
KLHDC4-217ENST00000566661 PPARGC1BQ86YN6 1023 aaKnown RBP27.59■■■□□ 2.01
KLHDC4-217ENST00000566661 SOGA1O94964 1423 aa27.54■■■□□ 2
KLHDC4-217ENST00000566661 SYNJ1O43426 1573 aa27.51■■□□□ 1.99
KLHDC4-217ENST00000566661 ZEB1P37275 1124 aaPredicted RBP27.47■■□□□ 1.99
KLHDC4-217ENST00000566661 RUSC2Q8N2Y8 1516 aa27.45■■□□□ 1.98
KLHDC4-217ENST00000566661 CC2D2AQ9P2K1 1620 aa27.44■■□□□ 1.98
KLHDC4-217ENST00000566661 EEA1Q15075 1411 aa27.36■■□□□ 1.97
KLHDC4-217ENST00000566661 CSRNP3Q8WYN3 585 aa27.34■■□□□ 1.97
KLHDC4-217ENST00000566661 CFTRP13569 1480 aa27.33■■□□□ 1.97
KLHDC4-217ENST00000566661 TOP2BQ02880 1626 aa27.28■■□□□ 1.96
KLHDC4-217ENST00000566661 BIVM-ERCC5R4GMW8 1640 aa27.22■■□□□ 1.95
KLHDC4-217ENST00000566661 CUX1P39880 1505 aa27.16■■□□□ 1.94
KLHDC4-217ENST00000566661 CADPSQ9ULU8 1353 aa27.15■■□□□ 1.94
KLHDC4-217ENST00000566661 PRDM2Q13029 1718 aa27.13■■□□□ 1.93
KLHDC4-217ENST00000566661 TNIKQ9UKE5 1360 aa27.13■■□□□ 1.93
KLHDC4-217ENST00000566661 GOLGA3Q08378 1498 aa27.1■■□□□ 1.93
KLHDC4-217ENST00000566661 UBTFP17480 764 aaKnown RBP27.1■■□□□ 1.93
KLHDC4-217ENST00000566661 CEP162Q5TB80 1403 aa27.08■■□□□ 1.93
KLHDC4-217ENST00000566661 CEP164Q9UPV0 1460 aa27.04■■□□□ 1.92
KLHDC4-217ENST00000566661 KIF21BO75037 1637 aa27.03■■□□□ 1.92
KLHDC4-217ENST00000566661 RAPGEF2Q9Y4G8 1499 aa26.92■■□□□ 1.9
KLHDC4-217ENST00000566661 NESP48681 1621 aa26.88■■□□□ 1.89
KLHDC4-217ENST00000566661 FANCD2Q9BXW9 1451 aa26.88■■□□□ 1.89
KLHDC4-217ENST00000566661 DNAJC5BQ9UF47 199 aa26.85■■□□□ 1.89
KLHDC4-217ENST00000566661 KIF27Q86VH2 1401 aa26.84■■□□□ 1.89
KLHDC4-217ENST00000566661 PRXQ9BXM0 1461 aa26.79■■□□□ 1.88
KLHDC4-217ENST00000566661 FGD5Q6ZNL6 1462 aa26.77■■□□□ 1.88
KLHDC4-217ENST00000566661 CLIP1P30622 1438 aa26.74■■□□□ 1.87
KLHDC4-217ENST00000566661 ERICH3Q5RHP9 1530 aa26.73■■□□□ 1.87
KLHDC4-217ENST00000566661 LAMC3Q9Y6N6 1575 aa26.72■■□□□ 1.87
KLHDC4-217ENST00000566661 CUX2O14529 1486 aa26.71■■□□□ 1.87
KLHDC4-217ENST00000566661 RANGAP1P46060 587 aaPredicted RBP26.67■■□□□ 1.86
KLHDC4-217ENST00000566661 DNMBPQ6XZF7 1577 aa26.66■■□□□ 1.86
KLHDC4-217ENST00000566661 TTBK1Q5TCY1 1321 aaPredicted RBP26.64■■□□□ 1.86
KLHDC4-217ENST00000566661 TOPBP1Q92547 1522 aa26.64■■□□□ 1.85
KLHDC4-217ENST00000566661 IGF1RP08069 1367 aa26.61■■□□□ 1.85
KLHDC4-217ENST00000566661 CCER1Q8TC90 406 aaPredicted RBP26.57■■□□□ 1.84
KLHDC4-217ENST00000566661 RAD54L2Q9Y4B4 1467 aa26.56■■□□□ 1.84
KLHDC4-217ENST00000566661 POLA1P09884 1462 aaPredicted RBP26.56■■□□□ 1.84
KLHDC4-217ENST00000566661 VPS8Q8N3P4 1428 aa26.54■■□□□ 1.84
KLHDC4-217ENST00000566661 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.54■■□□□ 1.84
KLHDC4-217ENST00000566661 URB2Q14146 1524 aaKnown RBP26.54■■□□□ 1.84
KLHDC4-217ENST00000566661 PDS5BQ9NTI5 1447 aa26.53■■□□□ 1.84
KLHDC4-217ENST00000566661 ABCA10Q8WWZ4 1543 aa26.48■■□□□ 1.83
KLHDC4-217ENST00000566661 CARMIL1Q5VZK9 1371 aa26.48■■□□□ 1.83
KLHDC4-217ENST00000566661 KIF21AQ7Z4S6 1674 aa26.47■■□□□ 1.83
KLHDC4-217ENST00000566661 ARAP1Q96P48 1450 aa26.42■■□□□ 1.82
KLHDC4-217ENST00000566661 APLP2Q06481 763 aa26.34■■□□□ 1.81
KLHDC4-217ENST00000566661 WDR97A6NE52 1622 aa26.33■■□□□ 1.81
KLHDC4-217ENST00000566661 ARHGAP35Q9NRY4 1499 aa26.32■■□□□ 1.8
KLHDC4-217ENST00000566661 TDRD9Q8NDG6 1382 aaKnown RBP26.28■■□□□ 1.8
KLHDC4-217ENST00000566661 CUL7Q14999 1698 aa26.23■■□□□ 1.79
KLHDC4-217ENST00000566661 ABCA5Q8WWZ7 1642 aa26.22■■□□□ 1.79
KLHDC4-217ENST00000566661 GAPVD1Q14C86 1478 aa26.19■■□□□ 1.78
KLHDC4-217ENST00000566661 TARBP1Q13395 1621 aaKnown RBP26.18■■□□□ 1.78
KLHDC4-217ENST00000566661 SCAF1Q9H7N4 1312 aaKnown RBP26.18■■□□□ 1.78
KLHDC4-217ENST00000566661 MRC2Q9UBG0 1479 aa26.17■■□□□ 1.78
KLHDC4-217ENST00000566661 DIEXFQ68CQ4 756 aaKnown RBP26.14■■□□□ 1.78
KLHDC4-217ENST00000566661 KANK4Q5T7N3 995 aaPredicted RBP26.13■■□□□ 1.77
KLHDC4-217ENST00000566661 PELP1Q8IZL8 1130 aaKnown RBP26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms