RNA–Protein interactions for RNA: ENST00000563170.5

MVD-206, Transcript of mevalonate diphosphate decarboxylase, humanhuman

TSL 3

Gene MVD, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MVD-206ENST00000563170 NISCHQ9Y2I1 1504 aa40.34■■■■■ 4.05
MVD-206ENST00000563170 CCDC180Q9P1Z9 1646 aa36.05■■■■□ 3.36
MVD-206ENST00000563170 ABCC9O60706 1549 aa35.06■■■■□ 3.2
MVD-206ENST00000563170 RB1CC1Q8TDY2 1594 aa33.85■■■■□ 3.01
MVD-206ENST00000563170 NACADO15069 1562 aa33.81■■■■□ 3
MVD-206ENST00000563170 MYO15BQ96JP2 1530 aa33.66■■■□□ 2.98
MVD-206ENST00000563170 ZCCHC6Q5VYS8 1495 aaKnown RBP33.63■■■□□ 2.97
MVD-206ENST00000563170 DCAF1Q9Y4B6 1507 aa33.48■■■□□ 2.95
MVD-206ENST00000563170 DCAF8L2P0C7V8 631 aa33.41■■■□□ 2.94
MVD-206ENST00000563170 UNC13AQ9UPW8 1703 aa33.22■■■□□ 2.91
MVD-206ENST00000563170 BICRAQ9NZM4 1560 aa32.83■■■□□ 2.85
MVD-206ENST00000563170 SCRIBQ14160 1630 aa32.72■■■□□ 2.83
MVD-206ENST00000563170 PABPN1Q86U42 306 aaKnown RBP eCLIP32.64■■■□□ 2.821e-8■■□□□ 12.1
MVD-206ENST00000563170 SHROOM4Q9ULL8 1493 aa32.58■■■□□ 2.81
MVD-206ENST00000563170 DNAJC5BQ9UF47 199 aa32.15■■■□□ 2.74
MVD-206ENST00000563170 EIF4G1Q04637 1599 aaKnown RBP31.95■■■□□ 2.71
MVD-206ENST00000563170 CC2D2AQ9P2K1 1620 aa31.83■■■□□ 2.69
MVD-206ENST00000563170 CECR2Q9BXF3 1484 aa31.54■■■□□ 2.64
MVD-206ENST00000563170 SMARCA4P51532 1647 aa31.36■■■□□ 2.61
MVD-206ENST00000563170 BAZ1AQ9NRL2 1556 aaPredicted RBP31.3■■■□□ 2.6
MVD-206ENST00000563170 SMARCA2P51531 1590 aa31.15■■■□□ 2.58
MVD-206ENST00000563170 NCAPD3P42695 1498 aa31.14■■■□□ 2.57
MVD-206ENST00000563170 ATAD2BQ9ULI0 1458 aa31.13■■■□□ 2.57
MVD-206ENST00000563170 PEG3Q9GZU2 1588 aa31.11■■■□□ 2.57
MVD-206ENST00000563170 HMGXB3Q12766 1538 aa31.07■■■□□ 2.56
MVD-206ENST00000563170 MROH2BQ7Z745 1585 aa31.05■■■□□ 2.56
MVD-206ENST00000563170 BAZ1BQ9UIG0 1483 aaKnown RBP30.87■■■□□ 2.53
MVD-206ENST00000563170 WIZO95785 1651 aa30.76■■■□□ 2.51
MVD-206ENST00000563170 RSF1Q96T23 1441 aaPredicted RBP30.64■■■□□ 2.5
MVD-206ENST00000563170 TOP2AP11388 1531 aaKnown RBP30.45■■■□□ 2.47
MVD-206ENST00000563170 LAMC3Q9Y6N6 1575 aa30.41■■■□□ 2.46
MVD-206ENST00000563170 NESP48681 1621 aa30.34■■■□□ 2.45
MVD-206ENST00000563170 ERCC6Q03468 1493 aa30.24■■■□□ 2.43
MVD-206ENST00000563170 CADPSQ9ULU8 1353 aa30.18■■■□□ 2.42
MVD-206ENST00000563170 KIF21AQ7Z4S6 1674 aa30.14■■■□□ 2.41
MVD-206ENST00000563170 PDS5BQ9NTI5 1447 aa30.1■■■□□ 2.41
MVD-206ENST00000563170 CUX2O14529 1486 aa30.06■■■□□ 2.4
MVD-206ENST00000563170 THOC2Q8NI27 1593 aaKnown RBP30.05■■■□□ 2.4
MVD-206ENST00000563170 PRDM2Q13029 1718 aa30.04■■■□□ 2.4
MVD-206ENST00000563170 CFTRP13569 1480 aa30.04■■■□□ 2.4
MVD-206ENST00000563170 CCDC88BA6NC98 1476 aa30■■■□□ 2.39
MVD-206ENST00000563170 FANCD2Q9BXW9 1451 aa29.85■■■□□ 2.37
MVD-206ENST00000563170 CEP164Q9UPV0 1460 aa29.85■■■□□ 2.37
MVD-206ENST00000563170 MRC2Q9UBG0 1479 aa29.81■■■□□ 2.36
MVD-206ENST00000563170 WDR62O43379 1518 aa29.78■■■□□ 2.36
MVD-206ENST00000563170 SUPT5HO00267 1087 aaKnown RBP29.63■■■□□ 2.33
MVD-206ENST00000563170 URB2Q14146 1524 aaKnown RBP29.57■■■□□ 2.32
MVD-206ENST00000563170 ABCC8Q09428 1581 aa29.43■■■□□ 2.3
MVD-206ENST00000563170 DNMBPQ6XZF7 1577 aa29.41■■■□□ 2.3
MVD-206ENST00000563170 TOPBP1Q92547 1522 aa29.39■■■□□ 2.3
MVD-206ENST00000563170 IFT140Q96RY7 1462 aa29.23■■■□□ 2.27
MVD-206ENST00000563170 CUX1P39880 1505 aa29.15■■■□□ 2.26
MVD-206ENST00000563170 TARBP1Q13395 1621 aaKnown RBP29.14■■■□□ 2.26
MVD-206ENST00000563170 POLA1P09884 1462 aaPredicted RBP29.14■■■□□ 2.26
MVD-206ENST00000563170 EIF4G3O43432 1585 aaKnown RBP29.05■■■□□ 2.24
MVD-206ENST00000563170 ZNF608Q9ULD9 1512 aaPredicted RBP29.04■■■□□ 2.24
MVD-206ENST00000563170 FGD5Q6ZNL6 1462 aa29.04■■■□□ 2.24
MVD-206ENST00000563170 DNAJC5Q9H3Z4 198 aa29.04■■■□□ 2.24
MVD-206ENST00000563170 WDR97A6NE52 1622 aa29.01■■■□□ 2.23
MVD-206ENST00000563170 BIVM-ERCC5R4GMW8 1640 aa29■■■□□ 2.23
MVD-206ENST00000563170 TOP2BQ02880 1626 aa28.95■■■□□ 2.23
MVD-206ENST00000563170 SOGA1O94964 1423 aa28.94■■■□□ 2.22
MVD-206ENST00000563170 RAD54L2Q9Y4B4 1467 aa28.94■■■□□ 2.22
MVD-206ENST00000563170 WRNQ14191 1432 aaPredicted RBP eCLIP28.9■■■□□ 2.22
MVD-206ENST00000563170 SYNJ1O43426 1573 aa28.89■■■□□ 2.22
MVD-206ENST00000563170 AQRO60306 1485 aaKnown RBP eCLIP28.84■■■□□ 2.211e-10■■■■□ 23
MVD-206ENST00000563170 ABCA10Q8WWZ4 1543 aa28.8■■■□□ 2.2
MVD-206ENST00000563170 ABCA5Q8WWZ7 1642 aa28.76■■■□□ 2.19
MVD-206ENST00000563170 PBRM1Q86U86 1689 aa28.75■■■□□ 2.19
MVD-206ENST00000563170 TDRD9Q8NDG6 1382 aaKnown RBP28.74■■■□□ 2.19
MVD-206ENST00000563170 CHD1O14646 1710 aa28.72■■■□□ 2.19
MVD-206ENST00000563170 GRIN2BQ13224 1484 aa28.68■■■□□ 2.18
MVD-206ENST00000563170 GAPVD1Q14C86 1478 aa28.66■■■□□ 2.18
MVD-206ENST00000563170 MAGI1Q96QZ7 1491 aaPredicted RBP28.66■■■□□ 2.18
MVD-206ENST00000563170 SNAPC4Q5SXM2 1469 aa28.64■■■□□ 2.17
MVD-206ENST00000563170 OSCARQ8IYS5 282 aa28.63■■■□□ 2.17
MVD-206ENST00000563170 SYNJ2O15056 1496 aa28.51■■■□□ 2.15
MVD-206ENST00000563170 ERICH3Q5RHP9 1530 aa28.48■■■□□ 2.15
MVD-206ENST00000563170 ADAMTS12P58397 1594 aa28.46■■■□□ 2.15
MVD-206ENST00000563170 FBLN2P98095 1184 aa28.38■■■□□ 2.13
MVD-206ENST00000563170 CLASP1Q7Z460 1538 aa28.38■■■□□ 2.13
MVD-206ENST00000563170 CHMP7Q8WUX9 453 aaPredicted RBP28.37■■■□□ 2.13
MVD-206ENST00000563170 RIMBP3CA6NJZ7 1639 aa28.34■■■□□ 2.13
MVD-206ENST00000563170 RIMBP3BA6NNM3 1639 aa28.34■■■□□ 2.13
MVD-206ENST00000563170 RIMBP3Q9UFD9 1639 aa28.34■■■□□ 2.13
MVD-206ENST00000563170 FHAD1B1AJZ9 1412 aa28.34■■■□□ 2.13
MVD-206ENST00000563170 GRIN2AQ12879 1464 aa28.32■■■□□ 2.12
MVD-206ENST00000563170 KIF27Q86VH2 1401 aa28.3■■■□□ 2.12
MVD-206ENST00000563170 ARHGEF11O15085 1522 aa28.29■■■□□ 2.12
MVD-206ENST00000563170 CUL7Q14999 1698 aa28.27■■■□□ 2.12
MVD-206ENST00000563170 NUP160Q12769 1436 aa28.21■■■□□ 2.11
MVD-206ENST00000563170 CEP170Q5SW79 1584 aa28.2■■■□□ 2.11
MVD-206ENST00000563170 IGF1RP08069 1367 aa28.15■■■□□ 2.1
MVD-206ENST00000563170 SHROOM2Q13796 1616 aa28.1■■■□□ 2.09
MVD-206ENST00000563170 RUSC2Q8N2Y8 1516 aa28.06■■■□□ 2.08
MVD-206ENST00000563170 ARAP1Q96P48 1450 aa28.05■■■□□ 2.08
MVD-206ENST00000563170 TRIM41Q8WV44 630 aa28.03■■■□□ 2.08
MVD-206ENST00000563170 CARMIL1Q5VZK9 1371 aa27.99■■■□□ 2.07
MVD-206ENST00000563170 ERCC6L2Q5T890 1561 aa27.9■■■□□ 2.06
MVD-206ENST00000563170 KIAA0586Q9BVV6 1533 aa27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms