RNA–Protein interactions for RNA: ENST00000476881.2

LRCH4-204, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 2

Gene LRCH4, Length 1,675 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-204ENST00000476881 NISCHQ9Y2I1 1504 aa47.97■■■■■ 5.27
LRCH4-204ENST00000476881 CCDC180Q9P1Z9 1646 aa42.55■■■■■ 4.4
LRCH4-204ENST00000476881 ABCC9O60706 1549 aa41.46■■■■■ 4.23
LRCH4-204ENST00000476881 DCAF8L2P0C7V8 631 aa40.08■■■■■ 4.01
LRCH4-204ENST00000476881 ZCCHC6Q5VYS8 1495 aaKnown RBP40.04■■■■■ 4
LRCH4-204ENST00000476881 NACADO15069 1562 aa39.95■■■■□ 3.99
LRCH4-204ENST00000476881 RB1CC1Q8TDY2 1594 aa39.95■■■■□ 3.99
LRCH4-204ENST00000476881 MYO15BQ96JP2 1530 aa39.76■■■■□ 3.96
LRCH4-204ENST00000476881 DCAF1Q9Y4B6 1507 aa39.68■■■■□ 3.94
LRCH4-204ENST00000476881 UNC13AQ9UPW8 1703 aa39.11■■■■□ 3.85
LRCH4-204ENST00000476881 SCRIBQ14160 1630 aa38.87■■■■□ 3.81
LRCH4-204ENST00000476881 PABPN1Q86U42 306 aaKnown RBP eCLIP38.79■■■■□ 3.8
LRCH4-204ENST00000476881 BICRAQ9NZM4 1560 aa38.74■■■■□ 3.79
LRCH4-204ENST00000476881 SHROOM4Q9ULL8 1493 aa38.3■■■■□ 3.72
LRCH4-204ENST00000476881 DNAJC5BQ9UF47 199 aa37.86■■■■□ 3.65
LRCH4-204ENST00000476881 EIF4G1Q04637 1599 aaKnown RBP37.71■■■■□ 3.63
LRCH4-204ENST00000476881 CC2D2AQ9P2K1 1620 aa37.51■■■■□ 3.59
LRCH4-204ENST00000476881 CECR2Q9BXF3 1484 aa37.37■■■■□ 3.57
LRCH4-204ENST00000476881 SMARCA4P51532 1647 aa37.18■■■■□ 3.54
LRCH4-204ENST00000476881 BAZ1AQ9NRL2 1556 aaPredicted RBP37.17■■■■□ 3.54
LRCH4-204ENST00000476881 MROH2BQ7Z745 1585 aa36.98■■■■□ 3.51
LRCH4-204ENST00000476881 ATAD2BQ9ULI0 1458 aa36.92■■■■□ 3.5
LRCH4-204ENST00000476881 SMARCA2P51531 1590 aa36.89■■■■□ 3.5
LRCH4-204ENST00000476881 NCAPD3P42695 1498 aa36.86■■■■□ 3.49
LRCH4-204ENST00000476881 PEG3Q9GZU2 1588 aa36.8■■■■□ 3.48
LRCH4-204ENST00000476881 RSF1Q96T23 1441 aaPredicted RBP36.76■■■■□ 3.48
LRCH4-204ENST00000476881 HMGXB3Q12766 1538 aa36.69■■■■□ 3.46
LRCH4-204ENST00000476881 BAZ1BQ9UIG0 1483 aaKnown RBP36.64■■■■□ 3.46
LRCH4-204ENST00000476881 WIZO95785 1651 aa36.63■■■■□ 3.45
LRCH4-204ENST00000476881 SUPT5HO00267 1087 aaKnown RBP36.37■■■■□ 3.41
LRCH4-204ENST00000476881 TOP2AP11388 1531 aaKnown RBP36.22■■■■□ 3.39
LRCH4-204ENST00000476881 NESP48681 1621 aa35.94■■■■□ 3.34
LRCH4-204ENST00000476881 LAMC3Q9Y6N6 1575 aa35.86■■■■□ 3.33
LRCH4-204ENST00000476881 CADPSQ9ULU8 1353 aa35.81■■■■□ 3.32
LRCH4-204ENST00000476881 CCDC88BA6NC98 1476 aa35.81■■■■□ 3.32
LRCH4-204ENST00000476881 ERCC6Q03468 1493 aa35.72■■■■□ 3.31
LRCH4-204ENST00000476881 CFTRP13569 1480 aa35.64■■■■□ 3.3
LRCH4-204ENST00000476881 PDS5BQ9NTI5 1447 aa35.62■■■■□ 3.29
LRCH4-204ENST00000476881 KIF21AQ7Z4S6 1674 aa35.54■■■■□ 3.28
LRCH4-204ENST00000476881 PRDM2Q13029 1718 aa35.43■■■■□ 3.26
LRCH4-204ENST00000476881 FANCD2Q9BXW9 1451 aa35.4■■■■□ 3.26
LRCH4-204ENST00000476881 THOC2Q8NI27 1593 aaKnown RBP35.33■■■■□ 3.25
LRCH4-204ENST00000476881 CEP164Q9UPV0 1460 aa35.33■■■■□ 3.25
LRCH4-204ENST00000476881 MRC2Q9UBG0 1479 aa35.23■■■■□ 3.23
LRCH4-204ENST00000476881 CUX2O14529 1486 aa35.22■■■■□ 3.23
LRCH4-204ENST00000476881 WDR62O43379 1518 aa35.1■■■■□ 3.21
LRCH4-204ENST00000476881 URB2Q14146 1524 aaKnown RBP35.03■■■■□ 3.2
LRCH4-204ENST00000476881 ABCC8Q09428 1581 aa34.86■■■■□ 3.17
LRCH4-204ENST00000476881 TOPBP1Q92547 1522 aa34.86■■■■□ 3.17
LRCH4-204ENST00000476881 DNMBPQ6XZF7 1577 aa34.83■■■■□ 3.17
LRCH4-204ENST00000476881 CUX1P39880 1505 aa34.68■■■■□ 3.14
LRCH4-204ENST00000476881 WRNQ14191 1432 aaPredicted RBP eCLIP34.64■■■■□ 3.14
LRCH4-204ENST00000476881 POLA1P09884 1462 aaPredicted RBP34.58■■■■□ 3.13
LRCH4-204ENST00000476881 IFT140Q96RY7 1462 aa34.58■■■■□ 3.13
LRCH4-204ENST00000476881 FGD5Q6ZNL6 1462 aa34.53■■■■□ 3.12
LRCH4-204ENST00000476881 SYNJ1O43426 1573 aa34.53■■■■□ 3.12
LRCH4-204ENST00000476881 TOP2BQ02880 1626 aa34.49■■■■□ 3.11
LRCH4-204ENST00000476881 BIVM-ERCC5R4GMW8 1640 aa34.48■■■■□ 3.11
LRCH4-204ENST00000476881 TARBP1Q13395 1621 aaKnown RBP34.46■■■■□ 3.11
LRCH4-204ENST00000476881 SOGA1O94964 1423 aa34.46■■■■□ 3.11
LRCH4-204ENST00000476881 RAD54L2Q9Y4B4 1467 aa34.45■■■■□ 3.1
LRCH4-204ENST00000476881 ZNF608Q9ULD9 1512 aaPredicted RBP34.42■■■■□ 3.1
LRCH4-204ENST00000476881 CHIC1Q5VXU3 224 aa34.32■■■■□ 3.08
LRCH4-204ENST00000476881 TRIM41Q8WV44 630 aa34.3■■■■□ 3.08
LRCH4-204ENST00000476881 EIF4G3O43432 1585 aaKnown RBP34.29■■■■□ 3.08
LRCH4-204ENST00000476881 AQRO60306 1485 aaKnown RBP eCLIP34.27■■■■□ 3.084e-9■■■□□ 16.6
LRCH4-204ENST00000476881 TDRD9Q8NDG6 1382 aaKnown RBP34.25■■■■□ 3.07
LRCH4-204ENST00000476881 WDR97A6NE52 1622 aa34.24■■■■□ 3.07
LRCH4-204ENST00000476881 ABCA10Q8WWZ4 1543 aa34.2■■■■□ 3.07
LRCH4-204ENST00000476881 GAPVD1Q14C86 1478 aa34.06■■■■□ 3.04
LRCH4-204ENST00000476881 ABCA5Q8WWZ7 1642 aa34.04■■■■□ 3.04
LRCH4-204ENST00000476881 GRIN2BQ13224 1484 aa34■■■■□ 3.03
LRCH4-204ENST00000476881 PBRM1Q86U86 1689 aa33.99■■■■□ 3.03
LRCH4-204ENST00000476881 SNAPC4Q5SXM2 1469 aa33.94■■■■□ 3.02
LRCH4-204ENST00000476881 DNAJC5Q9H3Z4 198 aa33.93■■■■□ 3.02
LRCH4-204ENST00000476881 MAGI1Q96QZ7 1491 aaPredicted RBP33.89■■■■□ 3.02
LRCH4-204ENST00000476881 KIF27Q86VH2 1401 aa33.86■■■■□ 3.01
LRCH4-204ENST00000476881 OSCARQ8IYS5 282 aa33.86■■■■□ 3.01
LRCH4-204ENST00000476881 CHD1O14646 1710 aa33.85■■■■□ 3.01
LRCH4-204ENST00000476881 FBLN2P98095 1184 aa33.85■■■■□ 3.01
LRCH4-204ENST00000476881 ERICH3Q5RHP9 1530 aa33.79■■■■□ 3
LRCH4-204ENST00000476881 RUSC2Q8N2Y8 1516 aa33.79■■■■□ 3
LRCH4-204ENST00000476881 CHMP7Q8WUX9 453 aaPredicted RBP33.77■■■■□ 3
LRCH4-204ENST00000476881 SYNJ2O15056 1496 aa33.77■■■■□ 3
LRCH4-204ENST00000476881 ADAMTS12P58397 1594 aa33.7■■■□□ 2.99
LRCH4-204ENST00000476881 FHAD1B1AJZ9 1412 aa33.66■■■□□ 2.98
LRCH4-204ENST00000476881 IGF1RP08069 1367 aa33.65■■■□□ 2.98
LRCH4-204ENST00000476881 EEA1Q15075 1411 aa33.63■■■□□ 2.97
LRCH4-204ENST00000476881 FAM9AQ8IZU1 332 aaPredicted RBP33.6■■■□□ 2.97
LRCH4-204ENST00000476881 GRIN2AQ12879 1464 aa33.57■■■□□ 2.96
LRCH4-204ENST00000476881 CUL7Q14999 1698 aa33.54■■■□□ 2.96
LRCH4-204ENST00000476881 CSRNP3Q8WYN3 585 aa33.53■■■□□ 2.96
LRCH4-204ENST00000476881 CARMIL1Q5VZK9 1371 aa33.47■■■□□ 2.95
LRCH4-204ENST00000476881 CLASP1Q7Z460 1538 aa33.44■■■□□ 2.94
LRCH4-204ENST00000476881 NUP160Q12769 1436 aa33.41■■■□□ 2.94
LRCH4-204ENST00000476881 CEP170Q5SW79 1584 aa33.4■■■□□ 2.94
LRCH4-204ENST00000476881 PRXQ9BXM0 1461 aa33.38■■■□□ 2.93
LRCH4-204ENST00000476881 RAPGEF2Q9Y4G8 1499 aa33.33■■■□□ 2.93
LRCH4-204ENST00000476881 ARHGEF11O15085 1522 aa33.28■■■□□ 2.92
LRCH4-204ENST00000476881 RIMBP3CA6NJZ7 1639 aa33.27■■■□□ 2.92
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms