RNA–Protein interactions for RNA: ENST00000419322.6

CCDC57-207, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 5

Gene CCDC57, Length 2,829 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-207ENST00000419322 NISCHQ9Y2I1 1504 aa30.1■■■□□ 2.41
CCDC57-207ENST00000419322 SHROOM4Q9ULL8 1493 aa26.43■■□□□ 1.82
CCDC57-207ENST00000419322 SUPT5HO00267 1087 aaKnown RBP26.09■■□□□ 1.77
CCDC57-207ENST00000419322 DCAF8L2P0C7V8 631 aa25.69■■□□□ 1.7
CCDC57-207ENST00000419322 ZCCHC6Q5VYS8 1495 aaKnown RBP25.44■■□□□ 1.66
CCDC57-207ENST00000419322 CHIC1Q5VXU3 224 aa25.21■■□□□ 1.63
CCDC57-207ENST00000419322 CCDC180Q9P1Z9 1646 aa25.19■■□□□ 1.62
CCDC57-207ENST00000419322 MYO15BQ96JP2 1530 aa25.06■■□□□ 1.6
CCDC57-207ENST00000419322 PCGF6Q9BYE7 350 aa24.91■■□□□ 1.58
CCDC57-207ENST00000419322 HRCP23327 699 aa24.85■■□□□ 1.57
CCDC57-207ENST00000419322 LOC105371045A0A1W2PR82 267 aa24.7■■□□□ 1.54
CCDC57-207ENST00000419322 PPARGC1BQ86YN6 1023 aaKnown RBP24.54■■□□□ 1.52
CCDC57-207ENST00000419322 DCAF1Q9Y4B6 1507 aa24.44■■□□□ 1.5
CCDC57-207ENST00000419322 FAM9AQ8IZU1 332 aaPredicted RBP24.19■■□□□ 1.46
CCDC57-207ENST00000419322 EHMT2Q96KQ7 1210 aa24.18■■□□□ 1.46
CCDC57-207ENST00000419322 TRIM26Q12899 539 aaPredicted RBP24.17■■□□□ 1.46
CCDC57-207ENST00000419322 TRIM41Q8WV44 630 aa24.15■■□□□ 1.46
CCDC57-207ENST00000419322 SCRIBQ14160 1630 aa24.08■■□□□ 1.44
CCDC57-207ENST00000419322 RSF1Q96T23 1441 aaPredicted RBP24.03■■□□□ 1.44
CCDC57-207ENST00000419322 ABCC9O60706 1549 aa24■■□□□ 1.43
CCDC57-207ENST00000419322 RB1CC1Q8TDY2 1594 aa23.78■■□□□ 1.4
CCDC57-207ENST00000419322 ZEB1P37275 1124 aaPredicted RBP23.68■■□□□ 1.38
CCDC57-207ENST00000419322 CECR2Q9BXF3 1484 aa23.66■■□□□ 1.38
CCDC57-207ENST00000419322 MROH2BQ7Z745 1585 aa23.52■■□□□ 1.36
CCDC57-207ENST00000419322 TTBK1Q5TCY1 1321 aaPredicted RBP23.41■■□□□ 1.34
CCDC57-207ENST00000419322 NACADO15069 1562 aa23.4■■□□□ 1.34
CCDC57-207ENST00000419322 WIZO95785 1651 aa23.38■■□□□ 1.33
CCDC57-207ENST00000419322 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.36■■□□□ 1.33
CCDC57-207ENST00000419322 CCER1Q8TC90 406 aaPredicted RBP23.31■■□□□ 1.32
CCDC57-207ENST00000419322 SCAF1Q9H7N4 1312 aaKnown RBP23.12■■□□□ 1.29
CCDC57-207ENST00000419322 BAZ1AQ9NRL2 1556 aaPredicted RBP23.08■■□□□ 1.29
CCDC57-207ENST00000419322 ABCC8Q09428 1581 aa23.07■■□□□ 1.28
CCDC57-207ENST00000419322 UBTFP17480 764 aaKnown RBP23.06■■□□□ 1.28
CCDC57-207ENST00000419322 CCDC88BA6NC98 1476 aa23.03■■□□□ 1.28
CCDC57-207ENST00000419322 SOGA1O94964 1423 aa22.96■■□□□ 1.27
CCDC57-207ENST00000419322 PABPN1Q86U42 306 aaKnown RBP eCLIP22.95■■□□□ 1.27
CCDC57-207ENST00000419322 CSRNP3Q8WYN3 585 aa22.91■■□□□ 1.26
CCDC57-207ENST00000419322 CEP162Q5TB80 1403 aa22.91■■□□□ 1.26
CCDC57-207ENST00000419322 DIEXFQ68CQ4 756 aaKnown RBP22.9■■□□□ 1.26
CCDC57-207ENST00000419322 TOP2AP11388 1531 aaKnown RBP22.89■■□□□ 1.25
CCDC57-207ENST00000419322 EIF4G1Q04637 1599 aaKnown RBP22.88■■□□□ 1.25
CCDC57-207ENST00000419322 SMARCA4P51532 1647 aa22.83■■□□□ 1.25
CCDC57-207ENST00000419322 RUSC2Q8N2Y8 1516 aa22.83■■□□□ 1.25
CCDC57-207ENST00000419322 NEUROD1Q13562 356 aa22.81■■□□□ 1.24
CCDC57-207ENST00000419322 SMARCA2P51531 1590 aa22.81■■□□□ 1.24
CCDC57-207ENST00000419322 RANGAP1P46060 587 aaPredicted RBP22.79■■□□□ 1.24
CCDC57-207ENST00000419322 ACIN1Q9UKV3 1341 aaKnown RBP22.79■■□□□ 1.24
CCDC57-207ENST00000419322 TNIKQ9UKE5 1360 aa22.79■■□□□ 1.24
CCDC57-207ENST00000419322 PELP1Q8IZL8 1130 aaKnown RBP22.75■■□□□ 1.23
CCDC57-207ENST00000419322 WRNQ14191 1432 aaPredicted RBP eCLIP22.75■■□□□ 1.23
CCDC57-207ENST00000419322 HNRNPUL2Q1KMD3 747 aaKnown RBP22.74■■□□□ 1.23
CCDC57-207ENST00000419322 CENPBP07199 599 aaPredicted RBP22.68■■□□□ 1.22
CCDC57-207ENST00000419322 GTF3C3Q9Y5Q9 886 aa22.66■■□□□ 1.22
CCDC57-207ENST00000419322 EEA1Q15075 1411 aa22.63■■□□□ 1.21
CCDC57-207ENST00000419322 YTHDC1Q96MU7 727 aaKnown RBP22.61■■□□□ 1.21
CCDC57-207ENST00000419322 GOLGA3Q08378 1498 aa22.6■■□□□ 1.21
CCDC57-207ENST00000419322 ZNF316A6NFI3 1004 aaPredicted RBP22.59■■□□□ 1.21
CCDC57-207ENST00000419322 APLP2Q06481 763 aa22.58■■□□□ 1.21
CCDC57-207ENST00000419322 UNC13AQ9UPW8 1703 aa22.57■■□□□ 1.2
CCDC57-207ENST00000419322 CLIP1P30622 1438 aa22.46■■□□□ 1.19
CCDC57-207ENST00000419322 CEP164Q9UPV0 1460 aa22.43■■□□□ 1.18
CCDC57-207ENST00000419322 MIER1Q8N108 512 aa22.39■■□□□ 1.17
CCDC57-207ENST00000419322 SYNJ1O43426 1573 aa22.39■■□□□ 1.17
CCDC57-207ENST00000419322 BICRAQ9NZM4 1560 aa22.37■■□□□ 1.17
CCDC57-207ENST00000419322 RAPGEF2Q9Y4G8 1499 aa22.33■■□□□ 1.16
CCDC57-207ENST00000419322 BAZ1BQ9UIG0 1483 aaKnown RBP22.31■■□□□ 1.16
CCDC57-207ENST00000419322 VPS8Q8N3P4 1428 aa22.3■■□□□ 1.16
CCDC57-207ENST00000419322 ATAD2BQ9ULI0 1458 aa22.3■■□□□ 1.16
CCDC57-207ENST00000419322 KIF21BO75037 1637 aa22.22■■□□□ 1.15
CCDC57-207ENST00000419322 PEG3Q9GZU2 1588 aa22.2■■□□□ 1.14
CCDC57-207ENST00000419322 ITGAEP38570 1179 aa22.15■■□□□ 1.14
CCDC57-207ENST00000419322 KANK4Q5T7N3 995 aaPredicted RBP22.14■■□□□ 1.13
CCDC57-207ENST00000419322 TOP2BQ02880 1626 aa21.99■■□□□ 1.11
CCDC57-207ENST00000419322 DHX57Q6P158 1386 aaKnown RBP21.98■■□□□ 1.11
CCDC57-207ENST00000419322 ARAP1Q96P48 1450 aa21.94■■□□□ 1.1
CCDC57-207ENST00000419322 PRXQ9BXM0 1461 aa21.93■■□□□ 1.1
CCDC57-207ENST00000419322 KIF27Q86VH2 1401 aa21.9■■□□□ 1.1
CCDC57-207ENST00000419322 CLSPNQ9HAW4 1339 aa21.88■■□□□ 1.09
CCDC57-207ENST00000419322 ATP1B4Q9UN42 357 aaPredicted RBP21.87■■□□□ 1.09
CCDC57-207ENST00000419322 CUX1P39880 1505 aa21.84■■□□□ 1.09
CCDC57-207ENST00000419322 ERICH3Q5RHP9 1530 aa21.84■■□□□ 1.09
CCDC57-207ENST00000419322 CCNB3Q8WWL7 1395 aa21.82■■□□□ 1.08
CCDC57-207ENST00000419322 BIVM-ERCC5R4GMW8 1640 aa21.81■■□□□ 1.08
CCDC57-207ENST00000419322 P3H3Q8IVL6 736 aa21.8■■□□□ 1.08
CCDC57-207ENST00000419322 FAM50AQ14320 339 aaKnown RBP21.76■■□□□ 1.07
CCDC57-207ENST00000419322 RRBP1Q9P2E9 1410 aaKnown RBP21.75■■□□□ 1.07
CCDC57-207ENST00000419322 NCAPD3P42695 1498 aa21.74■■□□□ 1.07
CCDC57-207ENST00000419322 ARHGAP35Q9NRY4 1499 aa21.74■■□□□ 1.07
CCDC57-207ENST00000419322 CUX2O14529 1486 aa21.7■■□□□ 1.06
CCDC57-207ENST00000419322 RAB3GAP2Q9H2M9 1393 aa21.69■■□□□ 1.06
CCDC57-207ENST00000419322 KCNH8Q96L42 1107 aa21.69■■□□□ 1.06
CCDC57-207ENST00000419322 SUPT16HQ9Y5B9 1047 aaKnown RBP21.67■■□□□ 1.06
CCDC57-207ENST00000419322 CFTRP13569 1480 aa21.66■■□□□ 1.06
CCDC57-207ENST00000419322 IGF1RP08069 1367 aa21.66■■□□□ 1.06
CCDC57-207ENST00000419322 SIN3AQ96ST3 1273 aa21.66■■□□□ 1.06
CCDC57-207ENST00000419322 HMGXB3Q12766 1538 aa21.63■■□□□ 1.05
CCDC57-207ENST00000419322 CARMIL1Q5VZK9 1371 aa21.62■■□□□ 1.05
CCDC57-207ENST00000419322 DDX10Q13206 875 aaKnown RBP21.62■■□□□ 1.05
CCDC57-207ENST00000419322 HIRIP3Q9BW71 556 aaPredicted RBP21.61■■□□□ 1.05
CCDC57-207ENST00000419322 MYT1Q01538 1121 aa21.59■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms