RNA–Protein interactions for RNA: ENST00000467201.5

LRCH4-202, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

TSL 2

Gene LRCH4, Length 4,754 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-202ENST00000467201 PELP1Q8IZL8 1130 aaKnown RBP25.19■■□□□ 1.62
LRCH4-202ENST00000467201 DCAF8L2P0C7V8 631 aa25.13■■□□□ 1.61
LRCH4-202ENST00000467201 SUPT5HO00267 1087 aaKnown RBP25.01■■□□□ 1.59
LRCH4-202ENST00000467201 MYT1Q01538 1121 aa24.92■■□□□ 1.58
LRCH4-202ENST00000467201 PCGF6Q9BYE7 350 aa24.55■■□□□ 1.52
LRCH4-202ENST00000467201 CENPBP07199 599 aaPredicted RBP24.44■■□□□ 1.5
LRCH4-202ENST00000467201 NISCHQ9Y2I1 1504 aa24.26■■□□□ 1.47
LRCH4-202ENST00000467201 EHMT2Q96KQ7 1210 aa24.19■■□□□ 1.46
LRCH4-202ENST00000467201 ERICH6Q7L0X2 663 aa24.17■■□□□ 1.46
LRCH4-202ENST00000467201 ZEB1P37275 1124 aaPredicted RBP24.12■■□□□ 1.45
LRCH4-202ENST00000467201 SHROOM4Q9ULL8 1493 aa24.12■■□□□ 1.45
LRCH4-202ENST00000467201 CCER1Q8TC90 406 aaPredicted RBP23.94■■□□□ 1.42
LRCH4-202ENST00000467201 HRCP23327 699 aa23.8■■□□□ 1.4
LRCH4-202ENST00000467201 YTHDC1Q96MU7 727 aaKnown RBP23.68■■□□□ 1.38
LRCH4-202ENST00000467201 APLP2Q06481 763 aa23.63■■□□□ 1.37
LRCH4-202ENST00000467201 FAM9AQ8IZU1 332 aaPredicted RBP23.6■■□□□ 1.37
LRCH4-202ENST00000467201 TTBK1Q5TCY1 1321 aaPredicted RBP23.58■■□□□ 1.36
LRCH4-202ENST00000467201 NEFLP07196 543 aa23.52■■□□□ 1.36
LRCH4-202ENST00000467201 PPARGC1BQ86YN6 1023 aaKnown RBP23.29■■□□□ 1.32
LRCH4-202ENST00000467201 TRIM26Q12899 539 aaPredicted RBP23.25■■□□□ 1.31
LRCH4-202ENST00000467201 TRIM41Q8WV44 630 aa23.02■■□□□ 1.28
LRCH4-202ENST00000467201 GTF3C3Q9Y5Q9 886 aa22.89■■□□□ 1.25
LRCH4-202ENST00000467201 DIEXFQ68CQ4 756 aaKnown RBP22.8■■□□□ 1.24
LRCH4-202ENST00000467201 RANGAP1P46060 587 aaPredicted RBP22.75■■□□□ 1.23
LRCH4-202ENST00000467201 DAXXQ9UER7 740 aaPredicted RBP22.75■■□□□ 1.23
LRCH4-202ENST00000467201 RTL5Q5HYW3 569 aaPredicted RBP22.74■■□□□ 1.23
LRCH4-202ENST00000467201 UBTFP17480 764 aaKnown RBP22.66■■□□□ 1.22
LRCH4-202ENST00000467201 LOC105371045A0A1W2PR82 267 aa22.63■■□□□ 1.21
LRCH4-202ENST00000467201 ACIN1Q9UKV3 1341 aaKnown RBP22.56■■□□□ 1.2
LRCH4-202ENST00000467201 CHIC1Q5VXU3 224 aa22.53■■□□□ 1.2
LRCH4-202ENST00000467201 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.49■■□□□ 1.19
LRCH4-202ENST00000467201 BCANQ96GW7 911 aa22.4■■□□□ 1.18
LRCH4-202ENST00000467201 ATP1B4Q9UN42 357 aaPredicted RBP22.38■■□□□ 1.17
LRCH4-202ENST00000467201 HNRNPUL2Q1KMD3 747 aaKnown RBP22.32■■□□□ 1.16
LRCH4-202ENST00000467201 ZNF316A6NFI3 1004 aaPredicted RBP22.25■■□□□ 1.15
LRCH4-202ENST00000467201 CDK11AQ9UQ88 783 aaPredicted RBP22.2■■□□□ 1.14
LRCH4-202ENST00000467201 ITGAEP38570 1179 aa22.14■■□□□ 1.14
LRCH4-202ENST00000467201 SCAF1Q9H7N4 1312 aaKnown RBP22.14■■□□□ 1.14
LRCH4-202ENST00000467201 EIF5BO60841 1220 aaKnown RBP22.12■■□□□ 1.13
LRCH4-202ENST00000467201 POLR3GLQ9BT43 218 aa22.09■■□□□ 1.13
LRCH4-202ENST00000467201 CNGB1Q14028 1251 aaPredicted RBP22.05■■□□□ 1.12
LRCH4-202ENST00000467201 NEUROD1Q13562 356 aa22.01■■□□□ 1.11
LRCH4-202ENST00000467201 CLSPNQ9HAW4 1339 aa22.01■■□□□ 1.11
LRCH4-202ENST00000467201 MYT1LQ9UL68 1186 aa21.89■■□□□ 1.09
LRCH4-202ENST00000467201 ANP32AP39687 249 aaKnown RBP21.84■■□□□ 1.09
LRCH4-202ENST00000467201 GLIPR1L2Q4G1C9 344 aa21.83■■□□□ 1.09
LRCH4-202ENST00000467201 ANP32CO43423 234 aa21.8■■□□□ 1.08
LRCH4-202ENST00000467201 FKBP8Q14318 412 aa21.75■■□□□ 1.07
LRCH4-202ENST00000467201 ANP32EQ9BTT0 268 aa21.67■■□□□ 1.06
LRCH4-202ENST00000467201 NPM2Q86SE8 214 aaKnown RBP21.61■■□□□ 1.05
LRCH4-202ENST00000467201 NBR1Q14596 966 aa21.6■■□□□ 1.05
LRCH4-202ENST00000467201 BCL11AQ9H165 835 aa21.55■■□□□ 1.04
LRCH4-202ENST00000467201 ZBTB47Q9UFB7 747 aaPredicted RBP21.44■■□□□ 1.02
LRCH4-202ENST00000467201 FAM50AQ14320 339 aaKnown RBP21.4■■□□□ 1.02
LRCH4-202ENST00000467201 MIER1Q8N108 512 aa21.36■■□□□ 1.01
LRCH4-202ENST00000467201 DCAF1Q9Y4B6 1507 aa21.32■■□□□ 1
LRCH4-202ENST00000467201 ANP32BQ92688 251 aaKnown RBP21.31■■□□□ 1
LRCH4-202ENST00000467201 HNRNPUQ00839 825 aaKnown RBP eCLIP21.31■■□□□ 1
LRCH4-202ENST00000467201 TRIM52Q96A61 297 aa21.26■□□□□ 0.99
LRCH4-202ENST00000467201 SLC4A1APQ9BWU0 796 aaKnown RBP21.24■□□□□ 0.99
LRCH4-202ENST00000467201 DDX10Q13206 875 aaKnown RBP21.2■□□□□ 0.98
LRCH4-202ENST00000467201 CCDC136Q96JN2 1154 aa21.2■□□□□ 0.98
LRCH4-202ENST00000467201 ABCC9O60706 1549 aa21.18■□□□□ 0.98
LRCH4-202ENST00000467201 CANXP27824 592 aaKnown RBP21.17■□□□□ 0.98
LRCH4-202ENST00000467201 ARXQ96QS3 562 aa21.15■□□□□ 0.98
LRCH4-202ENST00000467201 RTN4Q9NQC3 1192 aaKnown RBP21.13■□□□□ 0.97
LRCH4-202ENST00000467201 ZNF326Q5BKZ1 582 aaKnown RBP21.13■□□□□ 0.97
LRCH4-202ENST00000467201 IRX6P78412 446 aaPredicted RBP21.11■□□□□ 0.97
LRCH4-202ENST00000467201 FAM9BQ8IZU0 186 aa21.06■□□□□ 0.96
LRCH4-202ENST00000467201 UPF2Q9HAU5 1272 aaKnown RBP21.05■□□□□ 0.96
LRCH4-202ENST00000467201 HSP90AA1P07900 732 aaKnown RBP21.05■□□□□ 0.96
LRCH4-202ENST00000467201 NEFMP07197 916 aa21.03■□□□□ 0.96
LRCH4-202ENST00000467201 ERICH6BQ5W0A0 696 aa21.01■□□□□ 0.95
LRCH4-202ENST00000467201 SUPT16HQ9Y5B9 1047 aaKnown RBP20.98■□□□□ 0.95
LRCH4-202ENST00000467201 DEKP35659 375 aaKnown RBP20.95■□□□□ 0.94
LRCH4-202ENST00000467201 CSRNP3Q8WYN3 585 aa20.94■□□□□ 0.94
LRCH4-202ENST00000467201 PPM1GO15355 546 aaPredicted RBP20.88■□□□□ 0.93
LRCH4-202ENST00000467201 TRIM44Q96DX7 344 aaPredicted RBP20.88■□□□□ 0.93
LRCH4-202ENST00000467201 TNNT2P45379 298 aaPredicted RBP20.87■□□□□ 0.93
LRCH4-202ENST00000467201 NOP58Q9Y2X3 529 aaKnown RBP20.86■□□□□ 0.93
LRCH4-202ENST00000467201 DDRGK1Q96HY6 314 aa20.86■□□□□ 0.93
LRCH4-202ENST00000467201 SALL2Q9Y467 1007 aaPredicted RBP20.85■□□□□ 0.93
LRCH4-202ENST00000467201 NAP1L5Q96NT1 182 aaPredicted RBP20.85■□□□□ 0.93
LRCH4-202ENST00000467201 TONSLQ96HA7 1378 aa20.84■□□□□ 0.93
LRCH4-202ENST00000467201 MRS2Q9HD23 443 aa20.83■□□□□ 0.93
LRCH4-202ENST00000467201 PABPN1Q86U42 306 aaKnown RBP eCLIP20.82■□□□□ 0.92
LRCH4-202ENST00000467201 RBM19Q9Y4C8 960 aaKnown RBP20.81■□□□□ 0.92
LRCH4-202ENST00000467201 LAS1LQ9Y4W2 734 aaKnown RBP20.78■□□□□ 0.92
LRCH4-202ENST00000467201 TMC1Q8TDI8 760 aa20.76■□□□□ 0.91
LRCH4-202ENST00000467201 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.76■□□□□ 0.91
LRCH4-202ENST00000467201 BECN1Q14457 450 aa20.71■□□□□ 0.91
LRCH4-202ENST00000467201 HIRIP3Q9BW71 556 aaPredicted RBP20.69■□□□□ 0.9
LRCH4-202ENST00000467201 PPP4R2Q9NY27 417 aa20.69■□□□□ 0.9
LRCH4-202ENST00000467201 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.68■□□□□ 0.9
LRCH4-202ENST00000467201 TSHZ2Q9NRE2 1034 aa20.68■□□□□ 0.9
LRCH4-202ENST00000467201 MYO15BQ96JP2 1530 aa20.61■□□□□ 0.89
LRCH4-202ENST00000467201 CDK11BP21127 795 aaKnown RBP20.56■□□□□ 0.88
LRCH4-202ENST00000467201 CCDC180Q9P1Z9 1646 aa20.55■□□□□ 0.88
LRCH4-202ENST00000467201 B4GALNT3Q6L9W6 998 aa20.55■□□□□ 0.88
LRCH4-202ENST00000467201 GOLGA6L22H0YM25 854 aa20.54■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms