RNA–Protein interactions for RNA: ENST00000411975.5

ABCA13-201, Transcript of ATP binding cassette subfamily A member 13, humanhuman

TSL 2

Gene ABCA13, Length 4,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-201ENST00000411975 NISCHQ9Y2I1 1504 aa21.86■■□□□ 1.09
ABCA13-201ENST00000411975 DCAF8L2P0C7V8 631 aa21.08■□□□□ 0.96
ABCA13-201ENST00000411975 SUPT5HO00267 1087 aaKnown RBP20.29■□□□□ 0.84
ABCA13-201ENST00000411975 SHROOM4Q9ULL8 1493 aa20.2■□□□□ 0.82
ABCA13-201ENST00000411975 EHMT2Q96KQ7 1210 aa19.21■□□□□ 0.67
ABCA13-201ENST00000411975 FAM9AQ8IZU1 332 aaPredicted RBP19■□□□□ 0.63
ABCA13-201ENST00000411975 TRIM41Q8WV44 630 aa18.86■□□□□ 0.61
ABCA13-201ENST00000411975 PCGF6Q9BYE7 350 aa18.82■□□□□ 0.6
ABCA13-201ENST00000411975 APLP2Q06481 763 aa18.73■□□□□ 0.59
ABCA13-201ENST00000411975 TTBK1Q5TCY1 1321 aaPredicted RBP18.55■□□□□ 0.56
ABCA13-201ENST00000411975 CHIC1Q5VXU3 224 aa18.55■□□□□ 0.56
ABCA13-201ENST00000411975 UBTFP17480 764 aaKnown RBP18.42■□□□□ 0.54
ABCA13-201ENST00000411975 RANGAP1P46060 587 aaPredicted RBP18.4■□□□□ 0.54
ABCA13-201ENST00000411975 ZEB1P37275 1124 aaPredicted RBP18.37■□□□□ 0.53
ABCA13-201ENST00000411975 ABCC9O60706 1549 aa18.35■□□□□ 0.53
ABCA13-201ENST00000411975 LOC105371045A0A1W2PR82 267 aa18.31■□□□□ 0.52
ABCA13-201ENST00000411975 CCER1Q8TC90 406 aaPredicted RBP18.28■□□□□ 0.52
ABCA13-201ENST00000411975 TRIM26Q12899 539 aaPredicted RBP18.23■□□□□ 0.51
ABCA13-201ENST00000411975 ZCCHC6Q5VYS8 1495 aaKnown RBP18.21■□□□□ 0.5
ABCA13-201ENST00000411975 PPARGC1BQ86YN6 1023 aaKnown RBP18.17■□□□□ 0.5
ABCA13-201ENST00000411975 ATP1B4Q9UN42 357 aaPredicted RBP18.1■□□□□ 0.49
ABCA13-201ENST00000411975 CCDC180Q9P1Z9 1646 aa18.09■□□□□ 0.49
ABCA13-201ENST00000411975 HRCP23327 699 aa18.09■□□□□ 0.49
ABCA13-201ENST00000411975 PABPN1Q86U42 306 aaKnown RBP eCLIP18.03■□□□□ 0.48
ABCA13-201ENST00000411975 PELP1Q8IZL8 1130 aaKnown RBP18■□□□□ 0.47
ABCA13-201ENST00000411975 CENPBP07199 599 aaPredicted RBP17.93■□□□□ 0.46
ABCA13-201ENST00000411975 SCRIBQ14160 1630 aa17.82■□□□□ 0.44
ABCA13-201ENST00000411975 HNRNPUL2Q1KMD3 747 aaKnown RBP17.73■□□□□ 0.43
ABCA13-201ENST00000411975 ITGAEP38570 1179 aa17.69■□□□□ 0.42
ABCA13-201ENST00000411975 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.63■□□□□ 0.41
ABCA13-201ENST00000411975 YTHDC1Q96MU7 727 aaKnown RBP17.62■□□□□ 0.41
ABCA13-201ENST00000411975 CSRNP3Q8WYN3 585 aa17.55■□□□□ 0.4
ABCA13-201ENST00000411975 RSF1Q96T23 1441 aaPredicted RBP17.45■□□□□ 0.38
ABCA13-201ENST00000411975 DCAF1Q9Y4B6 1507 aa17.45■□□□□ 0.38
ABCA13-201ENST00000411975 RB1CC1Q8TDY2 1594 aa17.41■□□□□ 0.38
ABCA13-201ENST00000411975 NACADO15069 1562 aa17.4■□□□□ 0.38
ABCA13-201ENST00000411975 NEFLP07196 543 aa17.38■□□□□ 0.37
ABCA13-201ENST00000411975 DIEXFQ68CQ4 756 aaKnown RBP17.36■□□□□ 0.37
ABCA13-201ENST00000411975 FAM50AQ14320 339 aaKnown RBP17.35■□□□□ 0.37
ABCA13-201ENST00000411975 MYO15BQ96JP2 1530 aa17.32■□□□□ 0.36
ABCA13-201ENST00000411975 P3H3Q8IVL6 736 aa17.17■□□□□ 0.34
ABCA13-201ENST00000411975 POLR3GLQ9BT43 218 aa17.17■□□□□ 0.34
ABCA13-201ENST00000411975 MYT1LQ9UL68 1186 aa17.17■□□□□ 0.34
ABCA13-201ENST00000411975 ERICH6Q7L0X2 663 aa17.14■□□□□ 0.33
ABCA13-201ENST00000411975 NEUROD1Q13562 356 aa17.13■□□□□ 0.33
ABCA13-201ENST00000411975 CECR2Q9BXF3 1484 aa17.13■□□□□ 0.33
ABCA13-201ENST00000411975 TRIM52Q96A61 297 aa17.12■□□□□ 0.33
ABCA13-201ENST00000411975 ZNF316A6NFI3 1004 aaPredicted RBP17.1■□□□□ 0.33
ABCA13-201ENST00000411975 BAZ1AQ9NRL2 1556 aaPredicted RBP17.1■□□□□ 0.33
ABCA13-201ENST00000411975 FBLN2P98095 1184 aa17.06■□□□□ 0.32
ABCA13-201ENST00000411975 EEA1Q15075 1411 aa17.06■□□□□ 0.32
ABCA13-201ENST00000411975 WRNQ14191 1432 aaPredicted RBP eCLIP17.02■□□□□ 0.31
ABCA13-201ENST00000411975 CNGB1Q14028 1251 aaPredicted RBP17.01■□□□□ 0.31
ABCA13-201ENST00000411975 BAZ1BQ9UIG0 1483 aaKnown RBP17■□□□□ 0.31
ABCA13-201ENST00000411975 CLIP1P30622 1438 aa16.99■□□□□ 0.31
ABCA13-201ENST00000411975 CEP162Q5TB80 1403 aa16.96■□□□□ 0.31
ABCA13-201ENST00000411975 ARID3CA6NKF2 412 aa16.96■□□□□ 0.31
ABCA13-201ENST00000411975 GOLGA3Q08378 1498 aa16.95■□□□□ 0.3
ABCA13-201ENST00000411975 MROH2BQ7Z745 1585 aa16.94■□□□□ 0.3
ABCA13-201ENST00000411975 TNIKQ9UKE5 1360 aa16.88■□□□□ 0.29
ABCA13-201ENST00000411975 GTF3C3Q9Y5Q9 886 aa16.88■□□□□ 0.29
ABCA13-201ENST00000411975 CDK11AQ9UQ88 783 aaPredicted RBP16.87■□□□□ 0.29
ABCA13-201ENST00000411975 ANP32CO43423 234 aa16.87■□□□□ 0.29
ABCA13-201ENST00000411975 ZNF326Q5BKZ1 582 aaKnown RBP16.84■□□□□ 0.29
ABCA13-201ENST00000411975 CEP164Q9UPV0 1460 aa16.83■□□□□ 0.28
ABCA13-201ENST00000411975 ACIN1Q9UKV3 1341 aaKnown RBP16.8■□□□□ 0.28
ABCA13-201ENST00000411975 KIF27Q86VH2 1401 aa16.79■□□□□ 0.28
ABCA13-201ENST00000411975 ZNF777Q9ULD5 760 aaPredicted RBP16.79■□□□□ 0.28
ABCA13-201ENST00000411975 CCDC88BA6NC98 1476 aa16.78■□□□□ 0.28
ABCA13-201ENST00000411975 SOGA1O94964 1423 aa16.75■□□□□ 0.27
ABCA13-201ENST00000411975 MYT1Q01538 1121 aa16.75■□□□□ 0.27
ABCA13-201ENST00000411975 MTUS2Q5JR59 1369 aa16.73■□□□□ 0.27
ABCA13-201ENST00000411975 TONSLQ96HA7 1378 aa16.73■□□□□ 0.27
ABCA13-201ENST00000411975 SLC4A1APQ9BWU0 796 aaKnown RBP16.7■□□□□ 0.26
ABCA13-201ENST00000411975 WIZO95785 1651 aa16.7■□□□□ 0.26
ABCA13-201ENST00000411975 ABCC8Q09428 1581 aa16.68■□□□□ 0.26
ABCA13-201ENST00000411975 CHIC2Q9UKJ5 165 aa16.66■□□□□ 0.26
ABCA13-201ENST00000411975 TOP2AP11388 1531 aaKnown RBP16.65■□□□□ 0.26
ABCA13-201ENST00000411975 BCANQ96GW7 911 aa16.64■□□□□ 0.26
ABCA13-201ENST00000411975 SMARCA2P51531 1590 aa16.63■□□□□ 0.25
ABCA13-201ENST00000411975 CHMP7Q8WUX9 453 aaPredicted RBP16.61■□□□□ 0.25
ABCA13-201ENST00000411975 DDX10Q13206 875 aaKnown RBP16.6■□□□□ 0.25
ABCA13-201ENST00000411975 DAXXQ9UER7 740 aaPredicted RBP16.58■□□□□ 0.24
ABCA13-201ENST00000411975 CUX2O14529 1486 aa16.55■□□□□ 0.24
ABCA13-201ENST00000411975 CARMIL1Q5VZK9 1371 aa16.53■□□□□ 0.24
ABCA13-201ENST00000411975 MIER1Q8N108 512 aa16.52■□□□□ 0.24
ABCA13-201ENST00000411975 SMARCA4P51532 1647 aa16.52■□□□□ 0.23
ABCA13-201ENST00000411975 VPS8Q8N3P4 1428 aa16.51■□□□□ 0.23
ABCA13-201ENST00000411975 TSPY4P0CV99 314 aa16.5■□□□□ 0.23
ABCA13-201ENST00000411975 TSPY10P0CW01 314 aa16.5■□□□□ 0.23
ABCA13-201ENST00000411975 RRP7BPQ9NSQ0 103 aa16.49■□□□□ 0.23
ABCA13-201ENST00000411975 ATAD2BQ9ULI0 1458 aa16.47■□□□□ 0.23
ABCA13-201ENST00000411975 CLSPNQ9HAW4 1339 aa16.47■□□□□ 0.23
ABCA13-201ENST00000411975 FHAD1B1AJZ9 1412 aa16.46■□□□□ 0.23
ABCA13-201ENST00000411975 CCNB3Q8WWL7 1395 aa16.44■□□□□ 0.22
ABCA13-201ENST00000411975 HNRNPUQ00839 825 aaKnown RBP eCLIP16.42■□□□□ 0.22
ABCA13-201ENST00000411975 HIRIP3Q9BW71 556 aaPredicted RBP16.42■□□□□ 0.22
ABCA13-201ENST00000411975 PLEKHD1A6NEE1 506 aa16.4■□□□□ 0.22
ABCA13-201ENST00000411975 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.39■□□□□ 0.21
ABCA13-201ENST00000411975 NPM1P06748 294 aaKnown RBP eCLIP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms