RNA–Protein interactions for RNA: ENST00000533030.1

SPI1-203, Transcript of Spi-1 proto-oncogene, humanhuman

TSL 2 BASIC

Gene SPI1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPI1-203ENST00000533030 NISCHQ9Y2I1 1504 aa51.67■■■■■ 5.86
SPI1-203ENST00000533030 CCDC180Q9P1Z9 1646 aa46.06■■■■■ 4.96
SPI1-203ENST00000533030 ABCC9O60706 1549 aa45.55■■■■■ 4.88
SPI1-203ENST00000533030 RB1CC1Q8TDY2 1594 aa43.58■■■■■ 4.57
SPI1-203ENST00000533030 DCAF8L2P0C7V8 631 aa43.52■■■■■ 4.56
SPI1-203ENST00000533030 NACADO15069 1562 aa43.41■■■■■ 4.54
SPI1-203ENST00000533030 MYO15BQ96JP2 1530 aa42.97■■■■■ 4.47
SPI1-203ENST00000533030 ZCCHC6Q5VYS8 1495 aaKnown RBP42.94■■■■■ 4.46
SPI1-203ENST00000533030 DCAF1Q9Y4B6 1507 aa42.66■■■■■ 4.42
SPI1-203ENST00000533030 UNC13AQ9UPW8 1703 aa42.59■■■■■ 4.41
SPI1-203ENST00000533030 PABPN1Q86U42 306 aaKnown RBP eCLIP42.55■■■■■ 4.4
SPI1-203ENST00000533030 BICRAQ9NZM4 1560 aa42.27■■■■■ 4.36
SPI1-203ENST00000533030 DNAJC5BQ9UF47 199 aa42.17■■■■■ 4.34
SPI1-203ENST00000533030 SCRIBQ14160 1630 aa42.09■■■■■ 4.33
SPI1-203ENST00000533030 SHROOM4Q9ULL8 1493 aa41.7■■■■■ 4.27
SPI1-203ENST00000533030 EIF4G1Q04637 1599 aaKnown RBP41.2■■■■■ 4.19
SPI1-203ENST00000533030 CC2D2AQ9P2K1 1620 aa41.14■■■■■ 4.18
SPI1-203ENST00000533030 CECR2Q9BXF3 1484 aa40.94■■■■■ 4.14
SPI1-203ENST00000533030 SMARCA4P51532 1647 aa40.18■■■■■ 4.02
SPI1-203ENST00000533030 NCAPD3P42695 1498 aa40.07■■■■■ 4.01
SPI1-203ENST00000533030 BAZ1AQ9NRL2 1556 aaPredicted RBP40.06■■■■■ 4
SPI1-203ENST00000533030 ATAD2BQ9ULI0 1458 aa40.06■■■■■ 4
SPI1-203ENST00000533030 SMARCA2P51531 1590 aa39.97■■■■□ 3.99
SPI1-203ENST00000533030 MROH2BQ7Z745 1585 aa39.84■■■■□ 3.97
SPI1-203ENST00000533030 HMGXB3Q12766 1538 aa39.82■■■■□ 3.97
SPI1-203ENST00000533030 PEG3Q9GZU2 1588 aa39.73■■■■□ 3.95
SPI1-203ENST00000533030 BAZ1BQ9UIG0 1483 aaKnown RBP39.73■■■■□ 3.95
SPI1-203ENST00000533030 WIZO95785 1651 aa39.41■■■■□ 3.9
SPI1-203ENST00000533030 NESP48681 1621 aa39.3■■■■□ 3.88
SPI1-203ENST00000533030 ERCC6Q03468 1493 aa39.28■■■■□ 3.88
SPI1-203ENST00000533030 RSF1Q96T23 1441 aaPredicted RBP39.25■■■■□ 3.87
SPI1-203ENST00000533030 LAMC3Q9Y6N6 1575 aa39.08■■■■□ 3.85
SPI1-203ENST00000533030 TOP2AP11388 1531 aaKnown RBP38.93■■■■□ 3.82
SPI1-203ENST00000533030 CUX2O14529 1486 aa38.92■■■■□ 3.82
SPI1-203ENST00000533030 CADPSQ9ULU8 1353 aa38.92■■■■□ 3.82
SPI1-203ENST00000533030 PDS5BQ9NTI5 1447 aa38.86■■■■□ 3.81
SPI1-203ENST00000533030 KIF21AQ7Z4S6 1674 aa38.8■■■■□ 3.8
SPI1-203ENST00000533030 THOC2Q8NI27 1593 aaKnown RBP38.72■■■■□ 3.79
SPI1-203ENST00000533030 CFTRP13569 1480 aa38.58■■■■□ 3.77
SPI1-203ENST00000533030 CCDC88BA6NC98 1476 aa38.51■■■■□ 3.76
SPI1-203ENST00000533030 FANCD2Q9BXW9 1451 aa38.48■■■■□ 3.75
SPI1-203ENST00000533030 MRC2Q9UBG0 1479 aa38.47■■■■□ 3.75
SPI1-203ENST00000533030 CEP164Q9UPV0 1460 aa38.46■■■■□ 3.75
SPI1-203ENST00000533030 WDR62O43379 1518 aa38.33■■■■□ 3.73
SPI1-203ENST00000533030 DNAJC5Q9H3Z4 198 aa38.24■■■■□ 3.71
SPI1-203ENST00000533030 PRDM2Q13029 1718 aa38.24■■■■□ 3.71
SPI1-203ENST00000533030 URB2Q14146 1524 aaKnown RBP38.12■■■■□ 3.69
SPI1-203ENST00000533030 SUPT5HO00267 1087 aaKnown RBP38.11■■■■□ 3.69
SPI1-203ENST00000533030 TOPBP1Q92547 1522 aa37.82■■■■□ 3.64
SPI1-203ENST00000533030 ABCC8Q09428 1581 aa37.76■■■■□ 3.63
SPI1-203ENST00000533030 DNMBPQ6XZF7 1577 aa37.72■■■■□ 3.63
SPI1-203ENST00000533030 IFT140Q96RY7 1462 aa37.65■■■■□ 3.62
SPI1-203ENST00000533030 ZNF608Q9ULD9 1512 aaPredicted RBP37.56■■■■□ 3.6
SPI1-203ENST00000533030 POLA1P09884 1462 aaPredicted RBP37.47■■■■□ 3.59
SPI1-203ENST00000533030 TARBP1Q13395 1621 aaKnown RBP37.42■■■■□ 3.58
SPI1-203ENST00000533030 CUX1P39880 1505 aa37.4■■■■□ 3.58
SPI1-203ENST00000533030 RAD54L2Q9Y4B4 1467 aa37.36■■■■□ 3.57
SPI1-203ENST00000533030 EIF4G3O43432 1585 aaKnown RBP37.36■■■■□ 3.57
SPI1-203ENST00000533030 SOGA1O94964 1423 aa37.35■■■■□ 3.57
SPI1-203ENST00000533030 FGD5Q6ZNL6 1462 aa37.34■■■■□ 3.57
SPI1-203ENST00000533030 OSCARQ8IYS5 282 aa37.33■■■■□ 3.57
SPI1-203ENST00000533030 AQRO60306 1485 aaKnown RBP eCLIP37.33■■■■□ 3.576e-6■■■■□ 25.1
SPI1-203ENST00000533030 TDRD9Q8NDG6 1382 aaKnown RBP37.2■■■■□ 3.55
SPI1-203ENST00000533030 WDR97A6NE52 1622 aa37.03■■■■□ 3.52
SPI1-203ENST00000533030 WRNQ14191 1432 aaPredicted RBP eCLIP37.02■■■■□ 3.52
SPI1-203ENST00000533030 FBLN2P98095 1184 aa37.02■■■■□ 3.52
SPI1-203ENST00000533030 CHD1O14646 1710 aa36.98■■■■□ 3.51
SPI1-203ENST00000533030 TOP2BQ02880 1626 aa36.96■■■■□ 3.51
SPI1-203ENST00000533030 SYNJ1O43426 1573 aa36.95■■■■□ 3.51
SPI1-203ENST00000533030 BIVM-ERCC5R4GMW8 1640 aa36.95■■■■□ 3.51
SPI1-203ENST00000533030 SNAPC4Q5SXM2 1469 aa36.94■■■■□ 3.5
SPI1-203ENST00000533030 ABCA10Q8WWZ4 1543 aa36.92■■■■□ 3.5
SPI1-203ENST00000533030 TRIM41Q8WV44 630 aa36.92■■■■□ 3.5
SPI1-203ENST00000533030 GRIN2BQ13224 1484 aa36.92■■■■□ 3.5
SPI1-203ENST00000533030 GAPVD1Q14C86 1478 aa36.88■■■■□ 3.5
SPI1-203ENST00000533030 MAGI1Q96QZ7 1491 aaPredicted RBP36.83■■■■□ 3.49
SPI1-203ENST00000533030 CHMP7Q8WUX9 453 aaPredicted RBP36.82■■■■□ 3.48
SPI1-203ENST00000533030 PBRM1Q86U86 1689 aa36.81■■■■□ 3.48
SPI1-203ENST00000533030 ABCA5Q8WWZ7 1642 aa36.8■■■■□ 3.48
SPI1-203ENST00000533030 RIMBP3CA6NJZ7 1639 aa36.74■■■■□ 3.47
SPI1-203ENST00000533030 RIMBP3BA6NNM3 1639 aa36.74■■■■□ 3.47
SPI1-203ENST00000533030 RIMBP3Q9UFD9 1639 aa36.74■■■■□ 3.47
SPI1-203ENST00000533030 SYNJ2O15056 1496 aa36.72■■■■□ 3.47
SPI1-203ENST00000533030 ARHGEF11O15085 1522 aa36.68■■■■□ 3.46
SPI1-203ENST00000533030 CLASP1Q7Z460 1538 aa36.54■■■■□ 3.44
SPI1-203ENST00000533030 ADAMTS12P58397 1594 aa36.49■■■■□ 3.43
SPI1-203ENST00000533030 ERICH3Q5RHP9 1530 aa36.47■■■■□ 3.43
SPI1-203ENST00000533030 CYB5RLQ6IPT4 315 aa36.45■■■■□ 3.43
SPI1-203ENST00000533030 GRIN2AQ12879 1464 aa36.44■■■■□ 3.42
SPI1-203ENST00000533030 FHAD1B1AJZ9 1412 aa36.43■■■■□ 3.42
SPI1-203ENST00000533030 ARAP1Q96P48 1450 aa36.37■■■■□ 3.41
SPI1-203ENST00000533030 CEP170Q5SW79 1584 aa36.28■■■■□ 3.4
SPI1-203ENST00000533030 KIF27Q86VH2 1401 aa36.28■■■■□ 3.4
SPI1-203ENST00000533030 NUP160Q12769 1436 aa36.27■■■■□ 3.4
SPI1-203ENST00000533030 IGF1RP08069 1367 aa36.18■■■■□ 3.38
SPI1-203ENST00000533030 CUL7Q14999 1698 aa36.07■■■■□ 3.36
SPI1-203ENST00000533030 ERCC6L2Q5T890 1561 aa36.06■■■■□ 3.36
SPI1-203ENST00000533030 SHROOM2Q13796 1616 aa36.03■■■■□ 3.36
SPI1-203ENST00000533030 CARMIL1Q5VZK9 1371 aa35.98■■■■□ 3.35
SPI1-203ENST00000533030 JPH4Q96JJ6 628 aa35.97■■■■□ 3.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms