RNA–Protein interactions for RNA: ENST00000564484.5

KLHDC4-213, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-213ENST00000564484 NISCHQ9Y2I1 1504 aa25.72■■□□□ 1.71
KLHDC4-213ENST00000564484 CCDC180Q9P1Z9 1646 aa22.9■■□□□ 1.26
KLHDC4-213ENST00000564484 ABCC9O60706 1549 aa22.53■■□□□ 1.2
KLHDC4-213ENST00000564484 RB1CC1Q8TDY2 1594 aa21.57■■□□□ 1.04
KLHDC4-213ENST00000564484 NACADO15069 1562 aa21.52■■□□□ 1.04
KLHDC4-213ENST00000564484 DCAF8L2P0C7V8 631 aa21.46■■□□□ 1.03
KLHDC4-213ENST00000564484 ZCCHC6Q5VYS8 1495 aaKnown RBP21.44■■□□□ 1.02
KLHDC4-213ENST00000564484 MYO15BQ96JP2 1530 aa21.34■■□□□ 1.01
KLHDC4-213ENST00000564484 DCAF1Q9Y4B6 1507 aa21.24■□□□□ 0.99
KLHDC4-213ENST00000564484 UNC13AQ9UPW8 1703 aa21.18■□□□□ 0.98
KLHDC4-213ENST00000564484 BICRAQ9NZM4 1560 aa21.02■□□□□ 0.96
KLHDC4-213ENST00000564484 PABPN1Q86U42 306 aaKnown RBP eCLIP21.02■□□□□ 0.96
KLHDC4-213ENST00000564484 SCRIBQ14160 1630 aa20.95■□□□□ 0.94
KLHDC4-213ENST00000564484 DNAJC5BQ9UF47 199 aa20.93■□□□□ 0.94
KLHDC4-213ENST00000564484 SHROOM4Q9ULL8 1493 aa20.67■□□□□ 0.9
KLHDC4-213ENST00000564484 EIF4G1Q04637 1599 aaKnown RBP20.43■□□□□ 0.86
KLHDC4-213ENST00000564484 CC2D2AQ9P2K1 1620 aa20.38■□□□□ 0.85
KLHDC4-213ENST00000564484 CECR2Q9BXF3 1484 aa20.23■□□□□ 0.83
KLHDC4-213ENST00000564484 SMARCA4P51532 1647 aa20■□□□□ 0.79
KLHDC4-213ENST00000564484 DNAJC5Q9H3Z4 198 aa19.99■□□□□ 0.79
KLHDC4-213ENST00000564484 BAZ1AQ9NRL2 1556 aaPredicted RBP19.91■□□□□ 0.78
KLHDC4-213ENST00000564484 ATAD2BQ9ULI0 1458 aa19.89■□□□□ 0.77
KLHDC4-213ENST00000564484 NCAPD3P42695 1498 aa19.87■□□□□ 0.77
KLHDC4-213ENST00000564484 MROH2BQ7Z745 1585 aa19.87■□□□□ 0.77
KLHDC4-213ENST00000564484 SMARCA2P51531 1590 aa19.83■□□□□ 0.76
KLHDC4-213ENST00000564484 PEG3Q9GZU2 1588 aa19.78■□□□□ 0.76
KLHDC4-213ENST00000564484 HMGXB3Q12766 1538 aa19.78■□□□□ 0.76
KLHDC4-213ENST00000564484 BAZ1BQ9UIG0 1483 aaKnown RBP19.71■□□□□ 0.75
KLHDC4-213ENST00000564484 WIZO95785 1651 aa19.65■□□□□ 0.74
KLHDC4-213ENST00000564484 RSF1Q96T23 1441 aaPredicted RBP19.57■□□□□ 0.72
KLHDC4-213ENST00000564484 NESP48681 1621 aa19.51■□□□□ 0.71
KLHDC4-213ENST00000564484 TOP2AP11388 1531 aaKnown RBP19.41■□□□□ 0.7
KLHDC4-213ENST00000564484 ERCC6Q03468 1493 aa19.37■□□□□ 0.69
KLHDC4-213ENST00000564484 LAMC3Q9Y6N6 1575 aa19.36■□□□□ 0.69
KLHDC4-213ENST00000564484 CADPSQ9ULU8 1353 aa19.28■□□□□ 0.68
KLHDC4-213ENST00000564484 KIF21AQ7Z4S6 1674 aa19.27■□□□□ 0.67
KLHDC4-213ENST00000564484 THOC2Q8NI27 1593 aaKnown RBP19.23■□□□□ 0.67
KLHDC4-213ENST00000564484 CUX2O14529 1486 aa19.2■□□□□ 0.66
KLHDC4-213ENST00000564484 PDS5BQ9NTI5 1447 aa19.19■□□□□ 0.66
KLHDC4-213ENST00000564484 CCDC88BA6NC98 1476 aa19.17■□□□□ 0.66
KLHDC4-213ENST00000564484 CFTRP13569 1480 aa19.16■□□□□ 0.66
KLHDC4-213ENST00000564484 FANCD2Q9BXW9 1451 aa19.09■□□□□ 0.65
KLHDC4-213ENST00000564484 MRC2Q9UBG0 1479 aa19.07■□□□□ 0.64
KLHDC4-213ENST00000564484 CEP164Q9UPV0 1460 aa19.06■□□□□ 0.64
KLHDC4-213ENST00000564484 PRDM2Q13029 1718 aa19.03■□□□□ 0.64
KLHDC4-213ENST00000564484 WDR62O43379 1518 aa19.03■□□□□ 0.64
KLHDC4-213ENST00000564484 SUPT5HO00267 1087 aaKnown RBP18.96■□□□□ 0.63
KLHDC4-213ENST00000564484 URB2Q14146 1524 aaKnown RBP18.95■□□□□ 0.62
KLHDC4-213ENST00000564484 TOPBP1Q92547 1522 aa18.79■□□□□ 0.6
KLHDC4-213ENST00000564484 DNMBPQ6XZF7 1577 aa18.75■□□□□ 0.59
KLHDC4-213ENST00000564484 ABCC8Q09428 1581 aa18.68■□□□□ 0.58
KLHDC4-213ENST00000564484 IFT140Q96RY7 1462 aa18.65■□□□□ 0.58
KLHDC4-213ENST00000564484 CUX1P39880 1505 aa18.64■□□□□ 0.58
KLHDC4-213ENST00000564484 ZNF608Q9ULD9 1512 aaPredicted RBP18.64■□□□□ 0.58
KLHDC4-213ENST00000564484 TRIM41Q8WV44 630 aa18.63■□□□□ 0.57
KLHDC4-213ENST00000564484 POLA1P09884 1462 aaPredicted RBP18.62■□□□□ 0.57
KLHDC4-213ENST00000564484 TARBP1Q13395 1621 aaKnown RBP18.6■□□□□ 0.57
KLHDC4-213ENST00000564484 EIF4G3O43432 1585 aaKnown RBP18.57■□□□□ 0.56
KLHDC4-213ENST00000564484 FGD5Q6ZNL6 1462 aa18.57■□□□□ 0.56
KLHDC4-213ENST00000564484 RAD54L2Q9Y4B4 1467 aa18.57■□□□□ 0.56
KLHDC4-213ENST00000564484 AQRO60306 1485 aaKnown RBP eCLIP18.5■□□□□ 0.552e-8■■■□□ 18.4
KLHDC4-213ENST00000564484 SOGA1O94964 1423 aa18.49■□□□□ 0.55
KLHDC4-213ENST00000564484 WDR97A6NE52 1622 aa18.46■□□□□ 0.55
KLHDC4-213ENST00000564484 SYNJ1O43426 1573 aa18.46■□□□□ 0.55
KLHDC4-213ENST00000564484 TDRD9Q8NDG6 1382 aaKnown RBP18.44■□□□□ 0.54
KLHDC4-213ENST00000564484 WRNQ14191 1432 aaPredicted RBP eCLIP18.43■□□□□ 0.54
KLHDC4-213ENST00000564484 BIVM-ERCC5R4GMW8 1640 aa18.43■□□□□ 0.54
KLHDC4-213ENST00000564484 TOP2BQ02880 1626 aa18.42■□□□□ 0.54
KLHDC4-213ENST00000564484 ABCA10Q8WWZ4 1543 aa18.36■□□□□ 0.53
KLHDC4-213ENST00000564484 CHD1O14646 1710 aa18.35■□□□□ 0.53
KLHDC4-213ENST00000564484 SNAPC4Q5SXM2 1469 aa18.34■□□□□ 0.53
KLHDC4-213ENST00000564484 ABCA5Q8WWZ7 1642 aa18.34■□□□□ 0.53
KLHDC4-213ENST00000564484 OSCARQ8IYS5 282 aa18.33■□□□□ 0.52
KLHDC4-213ENST00000564484 PBRM1Q86U86 1689 aa18.31■□□□□ 0.52
KLHDC4-213ENST00000564484 GRIN2BQ13224 1484 aa18.3■□□□□ 0.52
KLHDC4-213ENST00000564484 GAPVD1Q14C86 1478 aa18.29■□□□□ 0.52
KLHDC4-213ENST00000564484 MAGI1Q96QZ7 1491 aaPredicted RBP18.26■□□□□ 0.51
KLHDC4-213ENST00000564484 FBLN2P98095 1184 aa18.23■□□□□ 0.51
KLHDC4-213ENST00000564484 SYNJ2O15056 1496 aa18.2■□□□□ 0.5
KLHDC4-213ENST00000564484 ADAMTS12P58397 1594 aa18.17■□□□□ 0.5
KLHDC4-213ENST00000564484 RIMBP3CA6NJZ7 1639 aa18.16■□□□□ 0.5
KLHDC4-213ENST00000564484 RIMBP3BA6NNM3 1639 aa18.16■□□□□ 0.5
KLHDC4-213ENST00000564484 RIMBP3Q9UFD9 1639 aa18.16■□□□□ 0.5
KLHDC4-213ENST00000564484 CLASP1Q7Z460 1538 aa18.14■□□□□ 0.49
KLHDC4-213ENST00000564484 CHMP7Q8WUX9 453 aaPredicted RBP18.14■□□□□ 0.49
KLHDC4-213ENST00000564484 ARHGEF11O15085 1522 aa18.13■□□□□ 0.49
KLHDC4-213ENST00000564484 ERICH3Q5RHP9 1530 aa18.12■□□□□ 0.49
KLHDC4-213ENST00000564484 GRIN2AQ12879 1464 aa18.09■□□□□ 0.49
KLHDC4-213ENST00000564484 FHAD1B1AJZ9 1412 aa18.06■□□□□ 0.48
KLHDC4-213ENST00000564484 CEP170Q5SW79 1584 aa18.05■□□□□ 0.48
KLHDC4-213ENST00000564484 NUP160Q12769 1436 aa18.02■□□□□ 0.48
KLHDC4-213ENST00000564484 ARAP1Q96P48 1450 aa18.01■□□□□ 0.47
KLHDC4-213ENST00000564484 KIF27Q86VH2 1401 aa18.01■□□□□ 0.47
KLHDC4-213ENST00000564484 IGF1RP08069 1367 aa17.98■□□□□ 0.47
KLHDC4-213ENST00000564484 CUL7Q14999 1698 aa17.95■□□□□ 0.46
KLHDC4-213ENST00000564484 ERCC6L2Q5T890 1561 aa17.94■□□□□ 0.46
KLHDC4-213ENST00000564484 RUSC2Q8N2Y8 1516 aa17.93■□□□□ 0.46
KLHDC4-213ENST00000564484 SHROOM2Q13796 1616 aa17.91■□□□□ 0.46
KLHDC4-213ENST00000564484 CYB5RLQ6IPT4 315 aa17.91■□□□□ 0.46
KLHDC4-213ENST00000564484 CARMIL1Q5VZK9 1371 aa17.86■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms