RNA–Protein interactions for RNA: ENST00000564396.5

KLHDC4-212, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-212ENST00000564396 NISCHQ9Y2I1 1504 aa36.62■■■■□ 3.45
KLHDC4-212ENST00000564396 CCDC180Q9P1Z9 1646 aa32.97■■■□□ 2.87
KLHDC4-212ENST00000564396 ABCC9O60706 1549 aa32.85■■■□□ 2.85
KLHDC4-212ENST00000564396 RB1CC1Q8TDY2 1594 aa31.3■■■□□ 2.6
KLHDC4-212ENST00000564396 NACADO15069 1562 aa31.09■■■□□ 2.57
KLHDC4-212ENST00000564396 DNAJC5BQ9UF47 199 aa30.87■■■□□ 2.53
KLHDC4-212ENST00000564396 UNC13AQ9UPW8 1703 aa30.78■■■□□ 2.52
KLHDC4-212ENST00000564396 MYO15BQ96JP2 1530 aa30.71■■■□□ 2.51
KLHDC4-212ENST00000564396 DCAF8L2P0C7V8 631 aa30.64■■■□□ 2.5
KLHDC4-212ENST00000564396 BICRAQ9NZM4 1560 aa30.5■■■□□ 2.47
KLHDC4-212ENST00000564396 PABPN1Q86U42 306 aaKnown RBP eCLIP30.5■■■□□ 2.47
KLHDC4-212ENST00000564396 ZCCHC6Q5VYS8 1495 aaKnown RBP30.38■■■□□ 2.45
KLHDC4-212ENST00000564396 DCAF1Q9Y4B6 1507 aa30.29■■■□□ 2.44
KLHDC4-212ENST00000564396 SHROOM4Q9ULL8 1493 aa30.03■■■□□ 2.4
KLHDC4-212ENST00000564396 SCRIBQ14160 1630 aa29.96■■■□□ 2.39
KLHDC4-212ENST00000564396 CC2D2AQ9P2K1 1620 aa29.76■■■□□ 2.35
KLHDC4-212ENST00000564396 EIF4G1Q04637 1599 aaKnown RBP29.69■■■□□ 2.34
KLHDC4-212ENST00000564396 CECR2Q9BXF3 1484 aa29.6■■■□□ 2.33
KLHDC4-212ENST00000564396 NCAPD3P42695 1498 aa28.69■■■□□ 2.18
KLHDC4-212ENST00000564396 SMARCA4P51532 1647 aa28.62■■■□□ 2.17
KLHDC4-212ENST00000564396 ATAD2BQ9ULI0 1458 aa28.59■■■□□ 2.17
KLHDC4-212ENST00000564396 HMGXB3Q12766 1538 aa28.53■■■□□ 2.16
KLHDC4-212ENST00000564396 SMARCA2P51531 1590 aa28.51■■■□□ 2.15
KLHDC4-212ENST00000564396 BAZ1AQ9NRL2 1556 aaPredicted RBP28.42■■■□□ 2.14
KLHDC4-212ENST00000564396 PEG3Q9GZU2 1588 aa28.38■■■□□ 2.13
KLHDC4-212ENST00000564396 CUX2O14529 1486 aa28.37■■■□□ 2.13
KLHDC4-212ENST00000564396 DNAJC5Q9H3Z4 198 aa28.31■■■□□ 2.12
KLHDC4-212ENST00000564396 ERCC6Q03468 1493 aa28.31■■■□□ 2.12
KLHDC4-212ENST00000564396 BAZ1BQ9UIG0 1483 aaKnown RBP28.28■■■□□ 2.12
KLHDC4-212ENST00000564396 NESP48681 1621 aa28.26■■■□□ 2.11
KLHDC4-212ENST00000564396 MROH2BQ7Z745 1585 aa28.23■■■□□ 2.11
KLHDC4-212ENST00000564396 THOC2Q8NI27 1593 aaKnown RBP28.08■■■□□ 2.09
KLHDC4-212ENST00000564396 LAMC3Q9Y6N6 1575 aa28.08■■■□□ 2.09
KLHDC4-212ENST00000564396 KIF21AQ7Z4S6 1674 aa27.98■■■□□ 2.07
KLHDC4-212ENST00000564396 WIZO95785 1651 aa27.92■■■□□ 2.06
KLHDC4-212ENST00000564396 PDS5BQ9NTI5 1447 aa27.81■■■□□ 2.04
KLHDC4-212ENST00000564396 CADPSQ9ULU8 1353 aa27.76■■■□□ 2.03
KLHDC4-212ENST00000564396 WDR62O43379 1518 aa27.64■■■□□ 2.02
KLHDC4-212ENST00000564396 MRC2Q9UBG0 1479 aa27.64■■■□□ 2.01
KLHDC4-212ENST00000564396 RSF1Q96T23 1441 aaPredicted RBP27.58■■■□□ 2.01
KLHDC4-212ENST00000564396 TOP2AP11388 1531 aaKnown RBP27.53■■■□□ 2
KLHDC4-212ENST00000564396 CEP164Q9UPV0 1460 aa27.51■■□□□ 1.99
KLHDC4-212ENST00000564396 CFTRP13569 1480 aa27.5■■□□□ 1.99
KLHDC4-212ENST00000564396 FANCD2Q9BXW9 1451 aa27.47■■□□□ 1.99
KLHDC4-212ENST00000564396 PRDM2Q13029 1718 aa27.36■■□□□ 1.97
KLHDC4-212ENST00000564396 URB2Q14146 1524 aaKnown RBP27.31■■□□□ 1.96
KLHDC4-212ENST00000564396 CCDC88BA6NC98 1476 aa27.19■■□□□ 1.94
KLHDC4-212ENST00000564396 TOPBP1Q92547 1522 aa26.98■■□□□ 1.91
KLHDC4-212ENST00000564396 IFT140Q96RY7 1462 aa26.95■■□□□ 1.91
KLHDC4-212ENST00000564396 TRIM41Q8WV44 630 aa26.95■■□□□ 1.9
KLHDC4-212ENST00000564396 ZNF608Q9ULD9 1512 aaPredicted RBP26.95■■□□□ 1.9
KLHDC4-212ENST00000564396 OSCARQ8IYS5 282 aa26.93■■□□□ 1.9
KLHDC4-212ENST00000564396 DNMBPQ6XZF7 1577 aa26.9■■□□□ 1.9
KLHDC4-212ENST00000564396 ABCC8Q09428 1581 aa26.86■■□□□ 1.89
KLHDC4-212ENST00000564396 EIF4G3O43432 1585 aaKnown RBP26.85■■□□□ 1.89
KLHDC4-212ENST00000564396 TARBP1Q13395 1621 aaKnown RBP26.83■■□□□ 1.88
KLHDC4-212ENST00000564396 RIMBP3CA6NJZ7 1639 aa26.77■■□□□ 1.88
KLHDC4-212ENST00000564396 RIMBP3BA6NNM3 1639 aa26.77■■□□□ 1.88
KLHDC4-212ENST00000564396 RIMBP3Q9UFD9 1639 aa26.77■■□□□ 1.88
KLHDC4-212ENST00000564396 POLA1P09884 1462 aaPredicted RBP26.7■■□□□ 1.87
KLHDC4-212ENST00000564396 CHD1O14646 1710 aa26.69■■□□□ 1.86
KLHDC4-212ENST00000564396 AQRO60306 1485 aaKnown RBP eCLIP26.65■■□□□ 1.862e-8■■■□□ 18.4
KLHDC4-212ENST00000564396 ARHGEF11O15085 1522 aa26.64■■□□□ 1.85
KLHDC4-212ENST00000564396 RAD54L2Q9Y4B4 1467 aa26.57■■□□□ 1.84
KLHDC4-212ENST00000564396 CUX1P39880 1505 aa26.53■■□□□ 1.84
KLHDC4-212ENST00000564396 WDR97A6NE52 1622 aa26.53■■□□□ 1.84
KLHDC4-212ENST00000564396 FGD5Q6ZNL6 1462 aa26.51■■□□□ 1.83
KLHDC4-212ENST00000564396 SOGA1O94964 1423 aa26.5■■□□□ 1.83
KLHDC4-212ENST00000564396 TDRD9Q8NDG6 1382 aaKnown RBP26.45■■□□□ 1.82
KLHDC4-212ENST00000564396 SNAPC4Q5SXM2 1469 aa26.41■■□□□ 1.82
KLHDC4-212ENST00000564396 ARAP1Q96P48 1450 aa26.39■■□□□ 1.82
KLHDC4-212ENST00000564396 CLASP1Q7Z460 1538 aa26.37■■□□□ 1.81
KLHDC4-212ENST00000564396 MAGI1Q96QZ7 1491 aaPredicted RBP26.34■■□□□ 1.81
KLHDC4-212ENST00000564396 PBRM1Q86U86 1689 aa26.34■■□□□ 1.81
KLHDC4-212ENST00000564396 FBLN2P98095 1184 aa26.32■■□□□ 1.8
KLHDC4-212ENST00000564396 GRIN2BQ13224 1484 aa26.31■■□□□ 1.8
KLHDC4-212ENST00000564396 CYB5RLQ6IPT4 315 aa26.28■■□□□ 1.8
KLHDC4-212ENST00000564396 SYNJ1O43426 1573 aa26.27■■□□□ 1.8
KLHDC4-212ENST00000564396 ABCA5Q8WWZ7 1642 aa26.27■■□□□ 1.8
KLHDC4-212ENST00000564396 SYNJ2O15056 1496 aa26.24■■□□□ 1.79
KLHDC4-212ENST00000564396 ABCA10Q8WWZ4 1543 aa26.24■■□□□ 1.79
KLHDC4-212ENST00000564396 GAPVD1Q14C86 1478 aa26.22■■□□□ 1.79
KLHDC4-212ENST00000564396 CHMP7Q8WUX9 453 aaPredicted RBP26.16■■□□□ 1.78
KLHDC4-212ENST00000564396 BIVM-ERCC5R4GMW8 1640 aa26.15■■□□□ 1.78
KLHDC4-212ENST00000564396 SUPT5HO00267 1087 aaKnown RBP26.14■■□□□ 1.78
KLHDC4-212ENST00000564396 TOP2BQ02880 1626 aa26.1■■□□□ 1.77
KLHDC4-212ENST00000564396 ADAMTS12P58397 1594 aa26.05■■□□□ 1.76
KLHDC4-212ENST00000564396 WRNQ14191 1432 aaPredicted RBP eCLIP26.03■■□□□ 1.76
KLHDC4-212ENST00000564396 GRIN2AQ12879 1464 aa26■■□□□ 1.75
KLHDC4-212ENST00000564396 CEP170Q5SW79 1584 aa25.98■■□□□ 1.75
KLHDC4-212ENST00000564396 TRHP20396 242 aaPredicted RBP25.95■■□□□ 1.74
KLHDC4-212ENST00000564396 ERCC6L2Q5T890 1561 aa25.95■■□□□ 1.74
KLHDC4-212ENST00000564396 NUP160Q12769 1436 aa25.94■■□□□ 1.74
KLHDC4-212ENST00000564396 SHROOM2Q13796 1616 aa25.92■■□□□ 1.74
KLHDC4-212ENST00000564396 ERICH3Q5RHP9 1530 aa25.9■■□□□ 1.74
KLHDC4-212ENST00000564396 FHAD1B1AJZ9 1412 aa25.87■■□□□ 1.73
KLHDC4-212ENST00000564396 RUSC2Q8N2Y8 1516 aa25.7■■□□□ 1.7
KLHDC4-212ENST00000564396 PRG4Q92954 1404 aaPredicted RBP25.61■■□□□ 1.69
KLHDC4-212ENST00000564396 KIF13AQ9H1H9 1805 aa25.6■■□□□ 1.69
KLHDC4-212ENST00000564396 CUL7Q14999 1698 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms