RNA–Protein interactions for RNA: ENST00000443272.2

NFIC-203, Transcript of nuclear factor I C, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NFIC, Length 1,716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIC-203ENST00000443272 NISCHQ9Y2I1 1504 aa38.34■■■■□ 3.73
NFIC-203ENST00000443272 CCDC180Q9P1Z9 1646 aa33.77■■■■□ 3
NFIC-203ENST00000443272 ABCC9O60706 1549 aa32.44■■■□□ 2.78
NFIC-203ENST00000443272 ZCCHC6Q5VYS8 1495 aaKnown RBP32.08■■■□□ 2.73
NFIC-203ENST00000443272 DCAF8L2P0C7V8 631 aa31.81■■■□□ 2.68
NFIC-203ENST00000443272 DCAF1Q9Y4B6 1507 aa31.71■■■□□ 2.67
NFIC-203ENST00000443272 MYO15BQ96JP2 1530 aa31.58■■■□□ 2.65
NFIC-203ENST00000443272 NACADO15069 1562 aa31.57■■■□□ 2.65
NFIC-203ENST00000443272 RB1CC1Q8TDY2 1594 aa31.45■■■□□ 2.63
NFIC-203ENST00000443272 SCRIBQ14160 1630 aa30.93■■■□□ 2.54
NFIC-203ENST00000443272 UNC13AQ9UPW8 1703 aa30.87■■■□□ 2.53
NFIC-203ENST00000443272 SHROOM4Q9ULL8 1493 aa30.77■■■□□ 2.52
NFIC-203ENST00000443272 BICRAQ9NZM4 1560 aa30.53■■■□□ 2.48
NFIC-203ENST00000443272 PABPN1Q86U42 306 aaKnown RBP eCLIP30.45■■■□□ 2.47
NFIC-203ENST00000443272 CECR2Q9BXF3 1484 aa29.83■■■□□ 2.37
NFIC-203ENST00000443272 EIF4G1Q04637 1599 aaKnown RBP29.65■■■□□ 2.34
NFIC-203ENST00000443272 BAZ1AQ9NRL2 1556 aaPredicted RBP29.65■■■□□ 2.34
NFIC-203ENST00000443272 SMARCA4P51532 1647 aa29.62■■■□□ 2.33
NFIC-203ENST00000443272 MROH2BQ7Z745 1585 aa29.59■■■□□ 2.33
NFIC-203ENST00000443272 RSF1Q96T23 1441 aaPredicted RBP29.48■■■□□ 2.31
NFIC-203ENST00000443272 CC2D2AQ9P2K1 1620 aa29.38■■■□□ 2.29
NFIC-203ENST00000443272 WIZO95785 1651 aa29.34■■■□□ 2.29
NFIC-203ENST00000443272 PEG3Q9GZU2 1588 aa29.29■■■□□ 2.28
NFIC-203ENST00000443272 SUPT5HO00267 1087 aaKnown RBP29.28■■■□□ 2.28
NFIC-203ENST00000443272 ATAD2BQ9ULI0 1458 aa29.27■■■□□ 2.28
NFIC-203ENST00000443272 SMARCA2P51531 1590 aa29.25■■■□□ 2.27
NFIC-203ENST00000443272 DNAJC5BQ9UF47 199 aa29.2■■■□□ 2.27
NFIC-203ENST00000443272 NCAPD3P42695 1498 aa29.13■■■□□ 2.25
NFIC-203ENST00000443272 BAZ1BQ9UIG0 1483 aaKnown RBP29.07■■■□□ 2.24
NFIC-203ENST00000443272 HMGXB3Q12766 1538 aa29.06■■■□□ 2.24
NFIC-203ENST00000443272 TOP2AP11388 1531 aaKnown RBP28.99■■■□□ 2.23
NFIC-203ENST00000443272 CCDC88BA6NC98 1476 aa28.68■■■□□ 2.18
NFIC-203ENST00000443272 CADPSQ9ULU8 1353 aa28.33■■■□□ 2.13
NFIC-203ENST00000443272 CFTRP13569 1480 aa28.31■■■□□ 2.12
NFIC-203ENST00000443272 NESP48681 1621 aa28.3■■■□□ 2.12
NFIC-203ENST00000443272 LAMC3Q9Y6N6 1575 aa28.27■■■□□ 2.12
NFIC-203ENST00000443272 PRDM2Q13029 1718 aa28.2■■■□□ 2.11
NFIC-203ENST00000443272 PDS5BQ9NTI5 1447 aa28.03■■■□□ 2.08
NFIC-203ENST00000443272 FANCD2Q9BXW9 1451 aa28.02■■■□□ 2.08
NFIC-203ENST00000443272 KIF21AQ7Z4S6 1674 aa28■■■□□ 2.07
NFIC-203ENST00000443272 CEP164Q9UPV0 1460 aa27.91■■■□□ 2.06
NFIC-203ENST00000443272 ABCC8Q09428 1581 aa27.88■■■□□ 2.05
NFIC-203ENST00000443272 ERCC6Q03468 1493 aa27.88■■■□□ 2.05
NFIC-203ENST00000443272 WRNQ14191 1432 aaPredicted RBP eCLIP27.76■■■□□ 2.031e-7■□□□□ 10.2
NFIC-203ENST00000443272 CHIC1Q5VXU3 224 aa27.72■■■□□ 2.03
NFIC-203ENST00000443272 MRC2Q9UBG0 1479 aa27.72■■■□□ 2.03
NFIC-203ENST00000443272 URB2Q14146 1524 aaKnown RBP27.72■■■□□ 2.03
NFIC-203ENST00000443272 CUX1P39880 1505 aa27.71■■■□□ 2.03
NFIC-203ENST00000443272 SYNJ1O43426 1573 aa27.7■■■□□ 2.02
NFIC-203ENST00000443272 THOC2Q8NI27 1593 aaKnown RBP27.7■■■□□ 2.02
NFIC-203ENST00000443272 DNMBPQ6XZF7 1577 aa27.67■■■□□ 2.02
NFIC-203ENST00000443272 TOPBP1Q92547 1522 aa27.65■■■□□ 2.02
NFIC-203ENST00000443272 TOP2BQ02880 1626 aa27.65■■■□□ 2.02
NFIC-203ENST00000443272 BIVM-ERCC5R4GMW8 1640 aa27.64■■■□□ 2.02
NFIC-203ENST00000443272 WDR62O43379 1518 aa27.61■■■□□ 2.01
NFIC-203ENST00000443272 TRIM41Q8WV44 630 aa27.59■■■□□ 2.01
NFIC-203ENST00000443272 FGD5Q6ZNL6 1462 aa27.51■■□□□ 1.99
NFIC-203ENST00000443272 POLA1P09884 1462 aaPredicted RBP27.47■■□□□ 1.99
NFIC-203ENST00000443272 CUX2O14529 1486 aa27.38■■□□□ 1.97
NFIC-203ENST00000443272 RAD54L2Q9Y4B4 1467 aa27.36■■□□□ 1.97
NFIC-203ENST00000443272 SOGA1O94964 1423 aa27.35■■□□□ 1.97
NFIC-203ENST00000443272 TARBP1Q13395 1621 aaKnown RBP27.31■■□□□ 1.96
NFIC-203ENST00000443272 IFT140Q96RY7 1462 aa27.28■■□□□ 1.96
NFIC-203ENST00000443272 WDR97A6NE52 1622 aa27.26■■□□□ 1.95
NFIC-203ENST00000443272 ABCA10Q8WWZ4 1543 aa27.25■■□□□ 1.95
NFIC-203ENST00000443272 ZNF608Q9ULD9 1512 aaPredicted RBP27.16■■□□□ 1.94
NFIC-203ENST00000443272 RUSC2Q8N2Y8 1516 aa27.15■■□□□ 1.94
NFIC-203ENST00000443272 TDRD9Q8NDG6 1382 aaKnown RBP27.15■■□□□ 1.94
NFIC-203ENST00000443272 KIF27Q86VH2 1401 aa27.11■■□□□ 1.93
NFIC-203ENST00000443272 ABCA5Q8WWZ7 1642 aa27.1■■□□□ 1.93
NFIC-203ENST00000443272 AQRO60306 1485 aaKnown RBP eCLIP27.09■■□□□ 1.934e-7■■■■■ 30.6
NFIC-203ENST00000443272 EIF4G3O43432 1585 aaKnown RBP27.08■■□□□ 1.92
NFIC-203ENST00000443272 FAM9AQ8IZU1 332 aaPredicted RBP27.05■■□□□ 1.92
NFIC-203ENST00000443272 GAPVD1Q14C86 1478 aa27.05■■□□□ 1.92
NFIC-203ENST00000443272 EEA1Q15075 1411 aa27.02■■□□□ 1.92
NFIC-203ENST00000443272 PBRM1Q86U86 1689 aa26.99■■□□□ 1.91
NFIC-203ENST00000443272 IGF1RP08069 1367 aa26.94■■□□□ 1.9
NFIC-203ENST00000443272 GRIN2BQ13224 1484 aa26.94■■□□□ 1.9
NFIC-203ENST00000443272 ERICH3Q5RHP9 1530 aa26.93■■□□□ 1.9
NFIC-203ENST00000443272 CSRNP3Q8WYN3 585 aa26.93■■□□□ 1.9
NFIC-203ENST00000443272 SNAPC4Q5SXM2 1469 aa26.83■■□□□ 1.89
NFIC-203ENST00000443272 CUL7Q14999 1698 aa26.83■■□□□ 1.88
NFIC-203ENST00000443272 CARMIL1Q5VZK9 1371 aa26.8■■□□□ 1.88
NFIC-203ENST00000443272 MAGI1Q96QZ7 1491 aaPredicted RBP26.79■■□□□ 1.88
NFIC-203ENST00000443272 PRXQ9BXM0 1461 aa26.78■■□□□ 1.88
NFIC-203ENST00000443272 ADAMTS12P58397 1594 aa26.78■■□□□ 1.88
NFIC-203ENST00000443272 FHAD1B1AJZ9 1412 aa26.74■■□□□ 1.87
NFIC-203ENST00000443272 KIF21BO75037 1637 aa26.73■■□□□ 1.87
NFIC-203ENST00000443272 RAPGEF2Q9Y4G8 1499 aa26.71■■□□□ 1.87
NFIC-203ENST00000443272 EHMT2Q96KQ7 1210 aa26.69■■□□□ 1.86
NFIC-203ENST00000443272 SYNJ2O15056 1496 aa26.69■■□□□ 1.86
NFIC-203ENST00000443272 CHD1O14646 1710 aa26.64■■□□□ 1.85
NFIC-203ENST00000443272 FBLN2P98095 1184 aa26.64■■□□□ 1.85
NFIC-203ENST00000443272 CHMP7Q8WUX9 453 aaPredicted RBP26.64■■□□□ 1.85
NFIC-203ENST00000443272 LOC105371045A0A1W2PR82 267 aa26.62■■□□□ 1.85
NFIC-203ENST00000443272 GOLGA3Q08378 1498 aa26.62■■□□□ 1.85
NFIC-203ENST00000443272 GRIN2AQ12879 1464 aa26.61■■□□□ 1.85
NFIC-203ENST00000443272 UBTFP17480 764 aaKnown RBP26.51■■□□□ 1.83
NFIC-203ENST00000443272 CEP170Q5SW79 1584 aa26.48■■□□□ 1.83
NFIC-203ENST00000443272 CTTNBP2Q8WZ74 1663 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms