RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 NISCHQ9Y2I1 1504 aa40.81■■■■■ 4.12
TRIM65-203ENST00000540812 ABCC9O60706 1549 aa36.66■■■■□ 3.46
TRIM65-203ENST00000540812 CCDC180Q9P1Z9 1646 aa36.56■■■■□ 3.44
TRIM65-203ENST00000540812 RB1CC1Q8TDY2 1594 aa34.83■■■■□ 3.17
TRIM65-203ENST00000540812 NACADO15069 1562 aa34.59■■■■□ 3.13
TRIM65-203ENST00000540812 DCAF8L2P0C7V8 631 aa34.47■■■■□ 3.11
TRIM65-203ENST00000540812 DNAJC5BQ9UF47 199 aa34.44■■■■□ 3.1
TRIM65-203ENST00000540812 PABPN1Q86U42 306 aaKnown RBP eCLIP34.16■■■■□ 3.06
TRIM65-203ENST00000540812 MYO15BQ96JP2 1530 aa34.09■■■■□ 3.05
TRIM65-203ENST00000540812 UNC13AQ9UPW8 1703 aa34.04■■■■□ 3.04
TRIM65-203ENST00000540812 BICRAQ9NZM4 1560 aa33.86■■■■□ 3.01
TRIM65-203ENST00000540812 ZCCHC6Q5VYS8 1495 aaKnown RBP33.82■■■■□ 3.01
TRIM65-203ENST00000540812 DCAF1Q9Y4B6 1507 aa33.68■■■□□ 2.98
TRIM65-203ENST00000540812 SCRIBQ14160 1630 aa33.38■■■□□ 2.93
TRIM65-203ENST00000540812 SHROOM4Q9ULL8 1493 aa33.33■■■□□ 2.93
TRIM65-203ENST00000540812 CC2D2AQ9P2K1 1620 aa33.09■■■□□ 2.89
TRIM65-203ENST00000540812 EIF4G1Q04637 1599 aaKnown RBP33.01■■■□□ 2.88
TRIM65-203ENST00000540812 CECR2Q9BXF3 1484 aa33.01■■■□□ 2.88
TRIM65-203ENST00000540812 NCAPD3P42695 1498 aa31.96■■■□□ 2.71
TRIM65-203ENST00000540812 ATAD2BQ9ULI0 1458 aa31.89■■■□□ 2.7
TRIM65-203ENST00000540812 SMARCA4P51532 1647 aa31.82■■■□□ 2.69
TRIM65-203ENST00000540812 SMARCA2P51531 1590 aa31.74■■■□□ 2.67
TRIM65-203ENST00000540812 HMGXB3Q12766 1538 aa31.7■■■□□ 2.67
TRIM65-203ENST00000540812 BAZ1AQ9NRL2 1556 aaPredicted RBP31.64■■■□□ 2.66
TRIM65-203ENST00000540812 ERCC6Q03468 1493 aa31.62■■■□□ 2.65
TRIM65-203ENST00000540812 DNAJC5Q9H3Z4 198 aa31.57■■■□□ 2.64
TRIM65-203ENST00000540812 BAZ1BQ9UIG0 1483 aaKnown RBP31.55■■■□□ 2.64
TRIM65-203ENST00000540812 CUX2O14529 1486 aa31.54■■■□□ 2.64
TRIM65-203ENST00000540812 NESP48681 1621 aa31.5■■■□□ 2.63
TRIM65-203ENST00000540812 PEG3Q9GZU2 1588 aa31.5■■■□□ 2.63
TRIM65-203ENST00000540812 MROH2BQ7Z745 1585 aa31.47■■■□□ 2.63
TRIM65-203ENST00000540812 LAMC3Q9Y6N6 1575 aa31.21■■■□□ 2.59
TRIM65-203ENST00000540812 THOC2Q8NI27 1593 aaKnown RBP31.14■■■□□ 2.58
TRIM65-203ENST00000540812 WIZO95785 1651 aa31.07■■■□□ 2.56
TRIM65-203ENST00000540812 PDS5BQ9NTI5 1447 aa31.05■■■□□ 2.56
TRIM65-203ENST00000540812 KIF21AQ7Z4S6 1674 aa31.03■■■□□ 2.56
TRIM65-203ENST00000540812 CADPSQ9ULU8 1353 aa31.01■■■□□ 2.55
TRIM65-203ENST00000540812 RSF1Q96T23 1441 aaPredicted RBP30.81■■■□□ 2.52
TRIM65-203ENST00000540812 MRC2Q9UBG0 1479 aa30.79■■■□□ 2.52
TRIM65-203ENST00000540812 WDR62O43379 1518 aa30.72■■■□□ 2.51
TRIM65-203ENST00000540812 TOP2AP11388 1531 aaKnown RBP30.67■■■□□ 2.5
TRIM65-203ENST00000540812 CEP164Q9UPV0 1460 aa30.66■■■□□ 2.5
TRIM65-203ENST00000540812 CFTRP13569 1480 aa30.64■■■□□ 2.5
TRIM65-203ENST00000540812 FANCD2Q9BXW9 1451 aa30.64■■■□□ 2.5
TRIM65-203ENST00000540812 URB2Q14146 1524 aaKnown RBP30.42■■■□□ 2.46
TRIM65-203ENST00000540812 CCDC88BA6NC98 1476 aa30.35■■■□□ 2.45
TRIM65-203ENST00000540812 PRDM2Q13029 1718 aa30.26■■■□□ 2.43
TRIM65-203ENST00000540812 TRIM41Q8WV44 630 aa30.22■■■□□ 2.43
TRIM65-203ENST00000540812 OSCARQ8IYS5 282 aa30.12■■■□□ 2.41
TRIM65-203ENST00000540812 TOPBP1Q92547 1522 aa30.07■■■□□ 2.4
TRIM65-203ENST00000540812 ZNF608Q9ULD9 1512 aaPredicted RBP30.06■■■□□ 2.4
TRIM65-203ENST00000540812 IFT140Q96RY7 1462 aa30.05■■■□□ 2.4
TRIM65-203ENST00000540812 ABCC8Q09428 1581 aa29.94■■■□□ 2.38
TRIM65-203ENST00000540812 DNMBPQ6XZF7 1577 aa29.94■■■□□ 2.38
TRIM65-203ENST00000540812 EIF4G3O43432 1585 aaKnown RBP29.84■■■□□ 2.37
TRIM65-203ENST00000540812 TARBP1Q13395 1621 aaKnown RBP29.78■■■□□ 2.36
TRIM65-203ENST00000540812 AQRO60306 1485 aaKnown RBP eCLIP29.78■■■□□ 2.362e-9■■■■■ 44.1
TRIM65-203ENST00000540812 POLA1P09884 1462 aaPredicted RBP29.77■■■□□ 2.36
TRIM65-203ENST00000540812 RIMBP3CA6NJZ7 1639 aa29.73■■■□□ 2.35
TRIM65-203ENST00000540812 RIMBP3BA6NNM3 1639 aa29.73■■■□□ 2.35
TRIM65-203ENST00000540812 RIMBP3Q9UFD9 1639 aa29.73■■■□□ 2.35
TRIM65-203ENST00000540812 RAD54L2Q9Y4B4 1467 aa29.68■■■□□ 2.34
TRIM65-203ENST00000540812 ARHGEF11O15085 1522 aa29.66■■■□□ 2.34
TRIM65-203ENST00000540812 SOGA1O94964 1423 aa29.62■■■□□ 2.33
TRIM65-203ENST00000540812 CHD1O14646 1710 aa29.6■■■□□ 2.33
TRIM65-203ENST00000540812 TDRD9Q8NDG6 1382 aaKnown RBP29.59■■■□□ 2.33
TRIM65-203ENST00000540812 FGD5Q6ZNL6 1462 aa29.58■■■□□ 2.33
TRIM65-203ENST00000540812 CUX1P39880 1505 aa29.57■■■□□ 2.32
TRIM65-203ENST00000540812 FBLN2P98095 1184 aa29.57■■■□□ 2.32
TRIM65-203ENST00000540812 SUPT5HO00267 1087 aaKnown RBP29.47■■■□□ 2.31
TRIM65-203ENST00000540812 SNAPC4Q5SXM2 1469 aa29.46■■■□□ 2.31
TRIM65-203ENST00000540812 CYB5RLQ6IPT4 315 aa29.45■■■□□ 2.31
TRIM65-203ENST00000540812 WDR97A6NE52 1622 aa29.43■■■□□ 2.3
TRIM65-203ENST00000540812 ARAP1Q96P48 1450 aa29.39■■■□□ 2.3
TRIM65-203ENST00000540812 GRIN2BQ13224 1484 aa29.36■■■□□ 2.29
TRIM65-203ENST00000540812 MAGI1Q96QZ7 1491 aaPredicted RBP29.35■■■□□ 2.29
TRIM65-203ENST00000540812 CHMP7Q8WUX9 453 aaPredicted RBP29.33■■■□□ 2.29
TRIM65-203ENST00000540812 CLASP1Q7Z460 1538 aa29.3■■■□□ 2.28
TRIM65-203ENST00000540812 GAPVD1Q14C86 1478 aa29.26■■■□□ 2.27
TRIM65-203ENST00000540812 SYNJ2O15056 1496 aa29.25■■■□□ 2.27
TRIM65-203ENST00000540812 SYNJ1O43426 1573 aa29.24■■■□□ 2.27
TRIM65-203ENST00000540812 ABCA10Q8WWZ4 1543 aa29.24■■■□□ 2.27
TRIM65-203ENST00000540812 PBRM1Q86U86 1689 aa29.21■■■□□ 2.27
TRIM65-203ENST00000540812 ABCA5Q8WWZ7 1642 aa29.18■■■□□ 2.26
TRIM65-203ENST00000540812 TRHP20396 242 aaPredicted RBP29.1■■■□□ 2.25
TRIM65-203ENST00000540812 WRNQ14191 1432 aaPredicted RBP eCLIP29.1■■■□□ 2.25
TRIM65-203ENST00000540812 TOP2BQ02880 1626 aa29.05■■■□□ 2.24
TRIM65-203ENST00000540812 BIVM-ERCC5R4GMW8 1640 aa29.04■■■□□ 2.24
TRIM65-203ENST00000540812 GRIN2AQ12879 1464 aa28.98■■■□□ 2.23
TRIM65-203ENST00000540812 ADAMTS12P58397 1594 aa28.97■■■□□ 2.23
TRIM65-203ENST00000540812 NUP160Q12769 1436 aa28.9■■■□□ 2.22
TRIM65-203ENST00000540812 CEP170Q5SW79 1584 aa28.89■■■□□ 2.22
TRIM65-203ENST00000540812 ERCC6L2Q5T890 1561 aa28.88■■■□□ 2.21
TRIM65-203ENST00000540812 FHAD1B1AJZ9 1412 aa28.88■■■□□ 2.21
TRIM65-203ENST00000540812 ERICH3Q5RHP9 1530 aa28.84■■■□□ 2.21
TRIM65-203ENST00000540812 SHROOM2Q13796 1616 aa28.74■■■□□ 2.19
TRIM65-203ENST00000540812 PRG4Q92954 1404 aaPredicted RBP28.62■■■□□ 2.17
TRIM65-203ENST00000540812 JPH4Q96JJ6 628 aa28.61■■■□□ 2.17
TRIM65-203ENST00000540812 RUSC2Q8N2Y8 1516 aa28.56■■■□□ 2.16
TRIM65-203ENST00000540812 IGF1RP08069 1367 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms