RNA–Protein interactions for RNA: ENST00000435803.5

ABCA13-204, Transcript of ATP binding cassette subfamily A member 13, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ABCA13, Length 17,184 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA13-204ENST00000435803 MYT1Q01538 1121 aa8.87□□□□□ -0.99
ABCA13-204ENST00000435803 PELP1Q8IZL8 1130 aaKnown RBP8.69□□□□□ -1.02
ABCA13-204ENST00000435803 TTBK1Q5TCY1 1321 aaPredicted RBP8.39□□□□□ -1.07
ABCA13-204ENST00000435803 ERICH6Q7L0X2 663 aa8.06□□□□□ -1.12
ABCA13-204ENST00000435803 CCER1Q8TC90 406 aaPredicted RBP7.94□□□□□ -1.14
ABCA13-204ENST00000435803 YTHDC1Q96MU7 727 aaKnown RBP7.93□□□□□ -1.14
ABCA13-204ENST00000435803 ZEB1P37275 1124 aaPredicted RBP7.9□□□□□ -1.14
ABCA13-204ENST00000435803 CENPBP07199 599 aaPredicted RBP7.8□□□□□ -1.16
ABCA13-204ENST00000435803 SLC24A1O60721 1099 aa7.77□□□□□ -1.17
ABCA13-204ENST00000435803 DCAF8L2P0C7V8 631 aa7.69□□□□□ -1.18
ABCA13-204ENST00000435803 RANGAP1P46060 587 aaPredicted RBP7.59□□□□□ -1.19
ABCA13-204ENST00000435803 MYT1LQ9UL68 1186 aa7.51□□□□□ -1.21
ABCA13-204ENST00000435803 CLSPNQ9HAW4 1339 aa7.47□□□□□ -1.21
ABCA13-204ENST00000435803 NEFLP07196 543 aa7.46□□□□□ -1.22
ABCA13-204ENST00000435803 APLP2Q06481 763 aa7.43□□□□□ -1.22
ABCA13-204ENST00000435803 FAM9AQ8IZU1 332 aaPredicted RBP7.43□□□□□ -1.22
ABCA13-204ENST00000435803 DAXXQ9UER7 740 aaPredicted RBP7.36□□□□□ -1.23
ABCA13-204ENST00000435803 NISCHQ9Y2I1 1504 aa7.33□□□□□ -1.24
ABCA13-204ENST00000435803 GLIPR1L2Q4G1C9 344 aa7.27□□□□□ -1.25
ABCA13-204ENST00000435803 RTL5Q5HYW3 569 aaPredicted RBP7.25□□□□□ -1.25
ABCA13-204ENST00000435803 HRCP23327 699 aa7.24□□□□□ -1.25
ABCA13-204ENST00000435803 TRIM26Q12899 539 aaPredicted RBP7.23□□□□□ -1.25
ABCA13-204ENST00000435803 EIF5BO60841 1220 aaKnown RBP7.22□□□□□ -1.25
ABCA13-204ENST00000435803 PCGF6Q9BYE7 350 aa7.2□□□□□ -1.26
ABCA13-204ENST00000435803 SUPT5HO00267 1087 aaKnown RBP7.18□□□□□ -1.26
ABCA13-204ENST00000435803 EHMT2Q96KQ7 1210 aa7.11□□□□□ -1.27
ABCA13-204ENST00000435803 BCL11AQ9H165 835 aa7.11□□□□□ -1.27
ABCA13-204ENST00000435803 PRKCSHP14314 528 aaPredicted RBP7.09□□□□□ -1.27
ABCA13-204ENST00000435803 ANP32EQ9BTT0 268 aa7.08□□□□□ -1.28
ABCA13-204ENST00000435803 NCLP19338 710 aaKnown RBP7.05□□□□□ -1.28
ABCA13-204ENST00000435803 ZNF316A6NFI3 1004 aaPredicted RBP7.05□□□□□ -1.28
ABCA13-204ENST00000435803 ANP32BQ92688 251 aaKnown RBP7.03□□□□□ -1.28
ABCA13-204ENST00000435803 ACIN1Q9UKV3 1341 aaKnown RBP7.01□□□□□ -1.29
ABCA13-204ENST00000435803 CDK11AQ9UQ88 783 aaPredicted RBP7.01□□□□□ -1.29
ABCA13-204ENST00000435803 ARID4BQ4LE39 1312 aaPredicted RBP6.98□□□□□ -1.29
ABCA13-204ENST00000435803 TRIM41Q8WV44 630 aa6.96□□□□□ -1.29
ABCA13-204ENST00000435803 TNNT2P45379 298 aaPredicted RBP6.95□□□□□ -1.3
ABCA13-204ENST00000435803 DIEXFQ68CQ4 756 aaKnown RBP6.95□□□□□ -1.3
ABCA13-204ENST00000435803 ANP32AP39687 249 aaKnown RBP6.94□□□□□ -1.3
ABCA13-204ENST00000435803 ZNF326Q5BKZ1 582 aaKnown RBP6.94□□□□□ -1.3
ABCA13-204ENST00000435803 ARXQ96QS3 562 aa6.93□□□□□ -1.3
ABCA13-204ENST00000435803 TRIM44Q96DX7 344 aaPredicted RBP6.92□□□□□ -1.3
ABCA13-204ENST00000435803 ERICH6BQ5W0A0 696 aa6.91□□□□□ -1.3
ABCA13-204ENST00000435803 NEUROD1Q13562 356 aa6.88□□□□□ -1.31
ABCA13-204ENST00000435803 NEFMP07197 916 aa6.88□□□□□ -1.31
ABCA13-204ENST00000435803 SHROOM4Q9ULL8 1493 aa6.87□□□□□ -1.31
ABCA13-204ENST00000435803 NCBP3Q53F19 620 aaKnown RBP6.86□□□□□ -1.31
ABCA13-204ENST00000435803 ANP32CO43423 234 aa6.84□□□□□ -1.31
ABCA13-204ENST00000435803 GTF3C3Q9Y5Q9 886 aa6.83□□□□□ -1.32
ABCA13-204ENST00000435803 UBTFP17480 764 aaKnown RBP6.83□□□□□ -1.32
ABCA13-204ENST00000435803 UPF2Q9HAU5 1272 aaKnown RBP6.82□□□□□ -1.32
ABCA13-204ENST00000435803 PODXL2Q9NZ53 605 aa6.81□□□□□ -1.32
ABCA13-204ENST00000435803 HOMEZQ8IX15 550 aa6.81□□□□□ -1.32
ABCA13-204ENST00000435803 DDRGK1Q96HY6 314 aa6.8□□□□□ -1.32
ABCA13-204ENST00000435803 ZBTB47Q9UFB7 747 aaPredicted RBP6.79□□□□□ -1.32
ABCA13-204ENST00000435803 HMGB1P09429 215 aaKnown RBP6.79□□□□□ -1.32
ABCA13-204ENST00000435803 AMER1Q5JTC6 1135 aaPredicted RBP6.79□□□□□ -1.32
ABCA13-204ENST00000435803 PTMSP20962 102 aa6.77□□□□□ -1.32
ABCA13-204ENST00000435803 POLR3GLQ9BT43 218 aa6.77□□□□□ -1.33
ABCA13-204ENST00000435803 SCAF1Q9H7N4 1312 aaKnown RBP6.77□□□□□ -1.33
ABCA13-204ENST00000435803 DCAF1Q9Y4B6 1507 aa6.76□□□□□ -1.33
ABCA13-204ENST00000435803 PPM1GO15355 546 aaPredicted RBP6.73□□□□□ -1.33
ABCA13-204ENST00000435803 UBE2Q2Q8WVN8 375 aa6.73□□□□□ -1.33
ABCA13-204ENST00000435803 BECN1Q14457 450 aa6.72□□□□□ -1.33
ABCA13-204ENST00000435803 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.72□□□□□ -1.33
ABCA13-204ENST00000435803 PKNOX2Q96KN3 472 aa6.72□□□□□ -1.33
ABCA13-204ENST00000435803 USP35Q9P2H5 1018 aa6.71□□□□□ -1.34
ABCA13-204ENST00000435803 GOLGA6L22H0YM25 854 aa6.71□□□□□ -1.34
ABCA13-204ENST00000435803 CFAP44Q96MT7 982 aa6.71□□□□□ -1.34
ABCA13-204ENST00000435803 CDK11BP21127 795 aaKnown RBP6.69□□□□□ -1.34
ABCA13-204ENST00000435803 CHIC1Q5VXU3 224 aa6.68□□□□□ -1.34
ABCA13-204ENST00000435803 LAS1LQ9Y4W2 734 aaKnown RBP6.66□□□□□ -1.34
ABCA13-204ENST00000435803 L1TD1Q5T7N2 865 aaKnown RBP6.66□□□□□ -1.34
ABCA13-204ENST00000435803 HSP90AA1P07900 732 aaKnown RBP6.65□□□□□ -1.35
ABCA13-204ENST00000435803 NRDCO43847 1150 aa6.64□□□□□ -1.35
ABCA13-204ENST00000435803 CHMP4BQ9H444 224 aaKnown RBP6.64□□□□□ -1.35
ABCA13-204ENST00000435803 RSPH6AQ9H0K4 717 aa6.63□□□□□ -1.35
ABCA13-204ENST00000435803 TIMELESSQ9UNS1 1208 aa6.63□□□□□ -1.35
ABCA13-204ENST00000435803 MTERF4Q7Z6M4 381 aaKnown RBP6.61□□□□□ -1.35
ABCA13-204ENST00000435803 PDE4CQ08493 712 aa6.61□□□□□ -1.35
ABCA13-204ENST00000435803 CALRP27797 417 aaKnown RBP6.6□□□□□ -1.35
ABCA13-204ENST00000435803 CHAF1AQ13111 956 aaPredicted RBP6.6□□□□□ -1.35
ABCA13-204ENST00000435803 TAF7LQ5H9L4 462 aa6.6□□□□□ -1.35
ABCA13-204ENST00000435803 NPM2Q86SE8 214 aaKnown RBP6.6□□□□□ -1.35
ABCA13-204ENST00000435803 ATP1B4Q9UN42 357 aaPredicted RBP6.58□□□□□ -1.36
ABCA13-204ENST00000435803 GOLGA6L6A8MZA4 724 aa6.57□□□□□ -1.36
ABCA13-204ENST00000435803 PDIA4P13667 645 aaKnown RBP6.57□□□□□ -1.36
ABCA13-204ENST00000435803 PPARGC1BQ86YN6 1023 aaKnown RBP6.57□□□□□ -1.36
ABCA13-204ENST00000435803 TULP1O00294 542 aaPredicted RBP6.57□□□□□ -1.36
ABCA13-204ENST00000435803 CNGB1Q14028 1251 aaPredicted RBP6.57□□□□□ -1.36
ABCA13-204ENST00000435803 C14orf37Q86TY3 774 aa6.57□□□□□ -1.36
ABCA13-204ENST00000435803 RTN4Q9NQC3 1192 aaKnown RBP6.56□□□□□ -1.36
ABCA13-204ENST00000435803 PNNQ9H307 717 aaKnown RBP6.56□□□□□ -1.36
ABCA13-204ENST00000435803 CCDC136Q96JN2 1154 aa6.56□□□□□ -1.36
ABCA13-204ENST00000435803 BCANQ96GW7 911 aa6.55□□□□□ -1.36
ABCA13-204ENST00000435803 MAP7D2Q96T17 732 aa6.55□□□□□ -1.36
ABCA13-204ENST00000435803 MS4A1P11836 297 aa6.55□□□□□ -1.36
ABCA13-204ENST00000435803 NAP1L5Q96NT1 182 aaPredicted RBP6.54□□□□□ -1.36
ABCA13-204ENST00000435803 GOLGA6L3A6NEY3 463 aa6.53□□□□□ -1.36
ABCA13-204ENST00000435803 HSP90B1P14625 803 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms