RNA–Protein interactions for RNA: ENST00000269383.7

TRIM65-201, Transcript of tripartite motif containing 65, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM65, Length 3,439 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-201ENST00000269383 NISCHQ9Y2I1 1504 aa28.96■■■□□ 2.23
TRIM65-201ENST00000269383 SHROOM4Q9ULL8 1493 aa26.18■■□□□ 1.78
TRIM65-201ENST00000269383 DCAF8L2P0C7V8 631 aa26.01■■□□□ 1.75
TRIM65-201ENST00000269383 SUPT5HO00267 1087 aaKnown RBP25.76■■□□□ 1.71
TRIM65-201ENST00000269383 EHMT2Q96KQ7 1210 aa24.38■■□□□ 1.49
TRIM65-201ENST00000269383 ZCCHC6Q5VYS8 1495 aaKnown RBP24.32■■□□□ 1.48
TRIM65-201ENST00000269383 CHIC1Q5VXU3 224 aa24.31■■□□□ 1.48
TRIM65-201ENST00000269383 LOC105371045A0A1W2PR82 267 aa24.14■■□□□ 1.46
TRIM65-201ENST00000269383 PCGF6Q9BYE7 350 aa24.13■■□□□ 1.45
TRIM65-201ENST00000269383 FAM9AQ8IZU1 332 aaPredicted RBP24.05■■□□□ 1.44
TRIM65-201ENST00000269383 MYO15BQ96JP2 1530 aa23.98■■□□□ 1.43
TRIM65-201ENST00000269383 CCDC180Q9P1Z9 1646 aa23.94■■□□□ 1.42
TRIM65-201ENST00000269383 PPARGC1BQ86YN6 1023 aaKnown RBP23.75■■□□□ 1.39
TRIM65-201ENST00000269383 ABCC9O60706 1549 aa23.7■■□□□ 1.38
TRIM65-201ENST00000269383 HRCP23327 699 aa23.62■■□□□ 1.37
TRIM65-201ENST00000269383 TRIM41Q8WV44 630 aa23.62■■□□□ 1.37
TRIM65-201ENST00000269383 SCRIBQ14160 1630 aa23.51■■□□□ 1.35
TRIM65-201ENST00000269383 TTBK1Q5TCY1 1321 aaPredicted RBP23.46■■□□□ 1.35
TRIM65-201ENST00000269383 RSF1Q96T23 1441 aaPredicted RBP23.19■■□□□ 1.3
TRIM65-201ENST00000269383 PABPN1Q86U42 306 aaKnown RBP eCLIP23.15■■□□□ 1.3
TRIM65-201ENST00000269383 DCAF1Q9Y4B6 1507 aa23.1■■□□□ 1.29
TRIM65-201ENST00000269383 CECR2Q9BXF3 1484 aa23.08■■□□□ 1.29
TRIM65-201ENST00000269383 TRIM26Q12899 539 aaPredicted RBP23.08■■□□□ 1.28
TRIM65-201ENST00000269383 RANGAP1P46060 587 aaPredicted RBP22.99■■□□□ 1.27
TRIM65-201ENST00000269383 RB1CC1Q8TDY2 1594 aa22.91■■□□□ 1.26
TRIM65-201ENST00000269383 MROH2BQ7Z745 1585 aa22.78■■□□□ 1.24
TRIM65-201ENST00000269383 UBTFP17480 764 aaKnown RBP22.75■■□□□ 1.23
TRIM65-201ENST00000269383 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.74■■□□□ 1.23
TRIM65-201ENST00000269383 CCER1Q8TC90 406 aaPredicted RBP22.62■■□□□ 1.21
TRIM65-201ENST00000269383 WIZO95785 1651 aa22.6■■□□□ 1.21
TRIM65-201ENST00000269383 NACADO15069 1562 aa22.52■■□□□ 1.2
TRIM65-201ENST00000269383 ABCC8Q09428 1581 aa22.4■■□□□ 1.18
TRIM65-201ENST00000269383 HNRNPUL2Q1KMD3 747 aaKnown RBP22.35■■□□□ 1.17
TRIM65-201ENST00000269383 SCAF1Q9H7N4 1312 aaKnown RBP22.34■■□□□ 1.17
TRIM65-201ENST00000269383 ZEB1P37275 1124 aaPredicted RBP22.34■■□□□ 1.17
TRIM65-201ENST00000269383 CCDC88BA6NC98 1476 aa22.3■■□□□ 1.16
TRIM65-201ENST00000269383 SOGA1O94964 1423 aa22.3■■□□□ 1.16
TRIM65-201ENST00000269383 CSRNP3Q8WYN3 585 aa22.28■■□□□ 1.16
TRIM65-201ENST00000269383 BAZ1AQ9NRL2 1556 aaPredicted RBP22.19■■□□□ 1.14
TRIM65-201ENST00000269383 RUSC2Q8N2Y8 1516 aa22.18■■□□□ 1.14
TRIM65-201ENST00000269383 APLP2Q06481 763 aa22.17■■□□□ 1.14
TRIM65-201ENST00000269383 YTHDC1Q96MU7 727 aaKnown RBP22.07■■□□□ 1.12
TRIM65-201ENST00000269383 CEP162Q5TB80 1403 aa22.04■■□□□ 1.12
TRIM65-201ENST00000269383 ITGAEP38570 1179 aa22.04■■□□□ 1.12
TRIM65-201ENST00000269383 PELP1Q8IZL8 1130 aaKnown RBP22■■□□□ 1.11
TRIM65-201ENST00000269383 ATP1B4Q9UN42 357 aaPredicted RBP21.98■■□□□ 1.11
TRIM65-201ENST00000269383 SMARCA4P51532 1647 aa21.97■■□□□ 1.11
TRIM65-201ENST00000269383 NEUROD1Q13562 356 aa21.96■■□□□ 1.11
TRIM65-201ENST00000269383 DIEXFQ68CQ4 756 aaKnown RBP21.93■■□□□ 1.1
TRIM65-201ENST00000269383 TOP2AP11388 1531 aaKnown RBP21.92■■□□□ 1.1
TRIM65-201ENST00000269383 WRNQ14191 1432 aaPredicted RBP eCLIP21.92■■□□□ 1.1
TRIM65-201ENST00000269383 GTF3C3Q9Y5Q9 886 aa21.9■■□□□ 1.1
TRIM65-201ENST00000269383 SMARCA2P51531 1590 aa21.89■■□□□ 1.09
TRIM65-201ENST00000269383 ACIN1Q9UKV3 1341 aaKnown RBP21.81■■□□□ 1.08
TRIM65-201ENST00000269383 TNIKQ9UKE5 1360 aa21.78■■□□□ 1.08
TRIM65-201ENST00000269383 P3H3Q8IVL6 736 aa21.78■■□□□ 1.08
TRIM65-201ENST00000269383 BAZ1BQ9UIG0 1483 aaKnown RBP21.77■■□□□ 1.08
TRIM65-201ENST00000269383 UNC13AQ9UPW8 1703 aa21.73■■□□□ 1.07
TRIM65-201ENST00000269383 CLIP1P30622 1438 aa21.72■■□□□ 1.07
TRIM65-201ENST00000269383 CENPBP07199 599 aaPredicted RBP21.71■■□□□ 1.07
TRIM65-201ENST00000269383 GOLGA3Q08378 1498 aa21.68■■□□□ 1.06
TRIM65-201ENST00000269383 ATAD2BQ9ULI0 1458 aa21.67■■□□□ 1.06
TRIM65-201ENST00000269383 BICRAQ9NZM4 1560 aa21.66■■□□□ 1.06
TRIM65-201ENST00000269383 RAPGEF2Q9Y4G8 1499 aa21.61■■□□□ 1.05
TRIM65-201ENST00000269383 KANK4Q5T7N3 995 aaPredicted RBP21.59■■□□□ 1.05
TRIM65-201ENST00000269383 ZNF316A6NFI3 1004 aaPredicted RBP21.58■■□□□ 1.04
TRIM65-201ENST00000269383 EIF4G1Q04637 1599 aaKnown RBP21.57■■□□□ 1.04
TRIM65-201ENST00000269383 SYNJ1O43426 1573 aa21.55■■□□□ 1.04
TRIM65-201ENST00000269383 EEA1Q15075 1411 aa21.51■■□□□ 1.03
TRIM65-201ENST00000269383 CEP164Q9UPV0 1460 aa21.51■■□□□ 1.03
TRIM65-201ENST00000269383 MIER1Q8N108 512 aa21.5■■□□□ 1.03
TRIM65-201ENST00000269383 FAM50AQ14320 339 aaKnown RBP21.47■■□□□ 1.03
TRIM65-201ENST00000269383 ARID3CA6NKF2 412 aa21.42■■□□□ 1.02
TRIM65-201ENST00000269383 VPS8Q8N3P4 1428 aa21.35■■□□□ 1.01
TRIM65-201ENST00000269383 HIRIP3Q9BW71 556 aaPredicted RBP21.33■■□□□ 1
TRIM65-201ENST00000269383 KIF27Q86VH2 1401 aa21.23■□□□□ 0.99
TRIM65-201ENST00000269383 DNAJC5BQ9UF47 199 aa21.22■□□□□ 0.99
TRIM65-201ENST00000269383 CUX2O14529 1486 aa21.22■□□□□ 0.99
TRIM65-201ENST00000269383 KIF21BO75037 1637 aa21.18■□□□□ 0.98
TRIM65-201ENST00000269383 SIN3AQ96ST3 1273 aa21.17■□□□□ 0.98
TRIM65-201ENST00000269383 ARAP1Q96P48 1450 aa21.13■□□□□ 0.97
TRIM65-201ENST00000269383 CUX1P39880 1505 aa21.1■□□□□ 0.97
TRIM65-201ENST00000269383 CARMIL1Q5VZK9 1371 aa21.09■□□□□ 0.97
TRIM65-201ENST00000269383 PEG3Q9GZU2 1588 aa21.08■□□□□ 0.97
TRIM65-201ENST00000269383 CNGB1Q14028 1251 aaPredicted RBP21.08■□□□□ 0.96
TRIM65-201ENST00000269383 NCAPD3P42695 1498 aa21.04■□□□□ 0.96
TRIM65-201ENST00000269383 IGF1RP08069 1367 aa21.04■□□□□ 0.96
TRIM65-201ENST00000269383 DDX10Q13206 875 aaKnown RBP21.03■□□□□ 0.96
TRIM65-201ENST00000269383 CHIC2Q9UKJ5 165 aa21.03■□□□□ 0.96
TRIM65-201ENST00000269383 KCNH8Q96L42 1107 aa21.03■□□□□ 0.96
TRIM65-201ENST00000269383 TOP2BQ02880 1626 aa21.02■□□□□ 0.96
TRIM65-201ENST00000269383 CADPSQ9ULU8 1353 aa21.01■□□□□ 0.95
TRIM65-201ENST00000269383 DHX57Q6P158 1386 aaKnown RBP21.01■□□□□ 0.95
TRIM65-201ENST00000269383 CCNB3Q8WWL7 1395 aa21.01■□□□□ 0.95
TRIM65-201ENST00000269383 TDRD9Q8NDG6 1382 aaKnown RBP20.99■□□□□ 0.95
TRIM65-201ENST00000269383 PRXQ9BXM0 1461 aa20.99■□□□□ 0.95
TRIM65-201ENST00000269383 BCANQ96GW7 911 aa20.99■□□□□ 0.95
TRIM65-201ENST00000269383 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
TRIM65-201ENST00000269383 NESP48681 1621 aa20.97■□□□□ 0.95
TRIM65-201ENST00000269383 CFTRP13569 1480 aa20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms