RNA–Protein interactions for RNA: ENST00000310300.10

LRCH4-201, Transcript of leucine rich repeats and calponin homology domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRCH4, Length 2,552 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH4-201ENST00000310300 NISCHQ9Y2I1 1504 aa38.3■■■■□ 3.72
LRCH4-201ENST00000310300 CCDC180Q9P1Z9 1646 aa32.77■■■□□ 2.84
LRCH4-201ENST00000310300 SHROOM4Q9ULL8 1493 aa32.73■■■□□ 2.83
LRCH4-201ENST00000310300 SUPT5HO00267 1087 aaKnown RBP32.48■■■□□ 2.79
LRCH4-201ENST00000310300 HRCP23327 699 aa32.39■■■□□ 2.78
LRCH4-201ENST00000310300 ZCCHC6Q5VYS8 1495 aaKnown RBP32.25■■■□□ 2.75
LRCH4-201ENST00000310300 DCAF8L2P0C7V8 631 aa32.21■■■□□ 2.75
LRCH4-201ENST00000310300 MYO15BQ96JP2 1530 aa32.04■■■□□ 2.72
LRCH4-201ENST00000310300 PCGF6Q9BYE7 350 aa31.9■■■□□ 2.7
LRCH4-201ENST00000310300 CHIC1Q5VXU3 224 aa31.87■■■□□ 2.69
LRCH4-201ENST00000310300 PPARGC1BQ86YN6 1023 aaKnown RBP31.77■■■□□ 2.68
LRCH4-201ENST00000310300 DCAF1Q9Y4B6 1507 aa31.3■■■□□ 2.6
LRCH4-201ENST00000310300 LOC105371045A0A1W2PR82 267 aa31.12■■■□□ 2.57
LRCH4-201ENST00000310300 ABCC9O60706 1549 aa31.08■■■□□ 2.57
LRCH4-201ENST00000310300 TRIM26Q12899 539 aaPredicted RBP30.93■■■□□ 2.54
LRCH4-201ENST00000310300 SCRIBQ14160 1630 aa30.8■■■□□ 2.52
LRCH4-201ENST00000310300 PELP1Q8IZL8 1130 aaKnown RBP30.72■■■□□ 2.51
LRCH4-201ENST00000310300 ZEB1P37275 1124 aaPredicted RBP30.55■■■□□ 2.48
LRCH4-201ENST00000310300 SCAF1Q9H7N4 1312 aaKnown RBP30.49■■■□□ 2.47
LRCH4-201ENST00000310300 NACADO15069 1562 aa30.46■■■□□ 2.47
LRCH4-201ENST00000310300 RB1CC1Q8TDY2 1594 aa30.15■■■□□ 2.42
LRCH4-201ENST00000310300 RSF1Q96T23 1441 aaPredicted RBP30.1■■■□□ 2.41
LRCH4-201ENST00000310300 TRIM41Q8WV44 630 aa30.06■■■□□ 2.4
LRCH4-201ENST00000310300 FAM9AQ8IZU1 332 aaPredicted RBP30.05■■■□□ 2.4
LRCH4-201ENST00000310300 CECR2Q9BXF3 1484 aa29.99■■■□□ 2.39
LRCH4-201ENST00000310300 EHMT2Q96KQ7 1210 aa29.92■■■□□ 2.38
LRCH4-201ENST00000310300 ACIN1Q9UKV3 1341 aaKnown RBP29.82■■■□□ 2.36
LRCH4-201ENST00000310300 MROH2BQ7Z745 1585 aa29.8■■■□□ 2.36
LRCH4-201ENST00000310300 NEUROD1Q13562 356 aa29.77■■■□□ 2.36
LRCH4-201ENST00000310300 UNC13AQ9UPW8 1703 aa29.71■■■□□ 2.35
LRCH4-201ENST00000310300 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.67■■■□□ 2.34
LRCH4-201ENST00000310300 PABPN1Q86U42 306 aaKnown RBP eCLIP29.65■■■□□ 2.34
LRCH4-201ENST00000310300 WIZO95785 1651 aa29.64■■■□□ 2.33
LRCH4-201ENST00000310300 CCER1Q8TC90 406 aaPredicted RBP29.59■■■□□ 2.33
LRCH4-201ENST00000310300 GTF3C3Q9Y5Q9 886 aa29.58■■■□□ 2.33
LRCH4-201ENST00000310300 DIEXFQ68CQ4 756 aaKnown RBP29.49■■■□□ 2.31
LRCH4-201ENST00000310300 CENPBP07199 599 aaPredicted RBP29.46■■■□□ 2.31
LRCH4-201ENST00000310300 BAZ1AQ9NRL2 1556 aaPredicted RBP29.46■■■□□ 2.31
LRCH4-201ENST00000310300 MYT1Q01538 1121 aa29.4■■■□□ 2.3
LRCH4-201ENST00000310300 BICRAQ9NZM4 1560 aa29.34■■■□□ 2.29
LRCH4-201ENST00000310300 SMARCA4P51532 1647 aa29.3■■■□□ 2.28
LRCH4-201ENST00000310300 TTBK1Q5TCY1 1321 aaPredicted RBP29.16■■■□□ 2.26
LRCH4-201ENST00000310300 TOP2AP11388 1531 aaKnown RBP29.08■■■□□ 2.25
LRCH4-201ENST00000310300 YTHDC1Q96MU7 727 aaKnown RBP29■■■□□ 2.23
LRCH4-201ENST00000310300 CCDC88BA6NC98 1476 aa28.99■■■□□ 2.23
LRCH4-201ENST00000310300 ZNF316A6NFI3 1004 aaPredicted RBP28.99■■■□□ 2.23
LRCH4-201ENST00000310300 WRNQ14191 1432 aaPredicted RBP eCLIP28.93■■■□□ 2.22
LRCH4-201ENST00000310300 SMARCA2P51531 1590 aa28.92■■■□□ 2.22
LRCH4-201ENST00000310300 EIF4G1Q04637 1599 aaKnown RBP28.85■■■□□ 2.21
LRCH4-201ENST00000310300 CEP162Q5TB80 1403 aa28.84■■■□□ 2.21
LRCH4-201ENST00000310300 ABCC8Q09428 1581 aa28.8■■■□□ 2.2
LRCH4-201ENST00000310300 MIER1Q8N108 512 aa28.78■■■□□ 2.2
LRCH4-201ENST00000310300 ATAD2BQ9ULI0 1458 aa28.7■■■□□ 2.19
LRCH4-201ENST00000310300 PEG3Q9GZU2 1588 aa28.67■■■□□ 2.18
LRCH4-201ENST00000310300 TNIKQ9UKE5 1360 aa28.65■■■□□ 2.18
LRCH4-201ENST00000310300 BAZ1BQ9UIG0 1483 aaKnown RBP28.63■■■□□ 2.17
LRCH4-201ENST00000310300 SOGA1O94964 1423 aa28.61■■■□□ 2.17
LRCH4-201ENST00000310300 UBTFP17480 764 aaKnown RBP28.56■■■□□ 2.16
LRCH4-201ENST00000310300 HNRNPUL2Q1KMD3 747 aaKnown RBP28.52■■■□□ 2.16
LRCH4-201ENST00000310300 CSRNP3Q8WYN3 585 aa28.48■■■□□ 2.15
LRCH4-201ENST00000310300 RUSC2Q8N2Y8 1516 aa28.46■■■□□ 2.15
LRCH4-201ENST00000310300 EEA1Q15075 1411 aa28.37■■■□□ 2.13
LRCH4-201ENST00000310300 GOLGA3Q08378 1498 aa28.33■■■□□ 2.13
LRCH4-201ENST00000310300 SUPT16HQ9Y5B9 1047 aaKnown RBP28.22■■■□□ 2.11
LRCH4-201ENST00000310300 SYNJ1O43426 1573 aa28.21■■■□□ 2.11
LRCH4-201ENST00000310300 NCAPD3P42695 1498 aa28.2■■■□□ 2.1
LRCH4-201ENST00000310300 HMGXB3Q12766 1538 aa28.13■■■□□ 2.09
LRCH4-201ENST00000310300 CLSPNQ9HAW4 1339 aa28.12■■■□□ 2.09
LRCH4-201ENST00000310300 CLIP1P30622 1438 aa28.11■■■□□ 2.09
LRCH4-201ENST00000310300 CEP164Q9UPV0 1460 aa28.06■■■□□ 2.08
LRCH4-201ENST00000310300 APLP2Q06481 763 aa28.06■■■□□ 2.08
LRCH4-201ENST00000310300 VPS8Q8N3P4 1428 aa28.05■■■□□ 2.08
LRCH4-201ENST00000310300 TSHZ2Q9NRE2 1034 aa28.03■■■□□ 2.08
LRCH4-201ENST00000310300 KIF21BO75037 1637 aa27.99■■■□□ 2.07
LRCH4-201ENST00000310300 RANGAP1P46060 587 aaPredicted RBP27.96■■■□□ 2.07
LRCH4-201ENST00000310300 DHX57Q6P158 1386 aaKnown RBP27.93■■■□□ 2.06
LRCH4-201ENST00000310300 ANP32EQ9BTT0 268 aa27.92■■■□□ 2.06
LRCH4-201ENST00000310300 CC2D2AQ9P2K1 1620 aa27.91■■■□□ 2.06
LRCH4-201ENST00000310300 TOP2BQ02880 1626 aa27.86■■■□□ 2.05
LRCH4-201ENST00000310300 RAPGEF2Q9Y4G8 1499 aa27.84■■■□□ 2.05
LRCH4-201ENST00000310300 CFTRP13569 1480 aa27.83■■■□□ 2.05
LRCH4-201ENST00000310300 CUX1P39880 1505 aa27.77■■■□□ 2.04
LRCH4-201ENST00000310300 BIVM-ERCC5R4GMW8 1640 aa27.75■■■□□ 2.03
LRCH4-201ENST00000310300 KCNH8Q96L42 1107 aa27.73■■■□□ 2.03
LRCH4-201ENST00000310300 BCANQ96GW7 911 aa27.69■■■□□ 2.02
LRCH4-201ENST00000310300 CADPSQ9ULU8 1353 aa27.67■■■□□ 2.02
LRCH4-201ENST00000310300 KANK4Q5T7N3 995 aaPredicted RBP27.64■■■□□ 2.02
LRCH4-201ENST00000310300 BCL11AQ9H165 835 aa27.64■■■□□ 2.02
LRCH4-201ENST00000310300 FKBP8Q14318 412 aa27.55■■■□□ 2
LRCH4-201ENST00000310300 ARAP1Q96P48 1450 aa27.54■■■□□ 2
LRCH4-201ENST00000310300 PRDM2Q13029 1718 aa27.54■■■□□ 2
LRCH4-201ENST00000310300 DNAJC5BQ9UF47 199 aa27.51■■□□□ 1.99
LRCH4-201ENST00000310300 RRBP1Q9P2E9 1410 aaKnown RBP27.51■■□□□ 1.99
LRCH4-201ENST00000310300 NESP48681 1621 aa27.5■■□□□ 1.99
LRCH4-201ENST00000310300 KIF27Q86VH2 1401 aa27.49■■□□□ 1.99
LRCH4-201ENST00000310300 ITGAEP38570 1179 aa27.47■■□□□ 1.99
LRCH4-201ENST00000310300 CUX2O14529 1486 aa27.45■■□□□ 1.98
LRCH4-201ENST00000310300 FANCD2Q9BXW9 1451 aa27.44■■□□□ 1.98
LRCH4-201ENST00000310300 PRXQ9BXM0 1461 aa27.41■■□□□ 1.98
LRCH4-201ENST00000310300 CCNB3Q8WWL7 1395 aa27.4■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms