RNA–Protein interactions for RNA: ENST00000353170.9

KLHDC4-204, Transcript of kelch domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KLHDC4, Length 1,663 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-204ENST00000353170 NISCHQ9Y2I1 1504 aa46.26■■■■■ 5
KLHDC4-204ENST00000353170 CCDC180Q9P1Z9 1646 aa40.4■■■■■ 4.06
KLHDC4-204ENST00000353170 ZCCHC6Q5VYS8 1495 aaKnown RBP38.88■■■■□ 3.81
KLHDC4-204ENST00000353170 DCAF1Q9Y4B6 1507 aa38.34■■■■□ 3.73
KLHDC4-204ENST00000353170 DCAF8L2P0C7V8 631 aa38.12■■■■□ 3.69
KLHDC4-204ENST00000353170 ABCC9O60706 1549 aa38■■■■□ 3.67
KLHDC4-204ENST00000353170 MYO15BQ96JP2 1530 aa37.89■■■■□ 3.66
KLHDC4-204ENST00000353170 SHROOM4Q9ULL8 1493 aa37.66■■■■□ 3.62
KLHDC4-204ENST00000353170 NACADO15069 1562 aa37.61■■■■□ 3.61
KLHDC4-204ENST00000353170 RB1CC1Q8TDY2 1594 aa37.27■■■■□ 3.56
KLHDC4-204ENST00000353170 SCRIBQ14160 1630 aa37.04■■■■□ 3.52
KLHDC4-204ENST00000353170 UNC13AQ9UPW8 1703 aa36.39■■■■□ 3.42
KLHDC4-204ENST00000353170 SUPT5HO00267 1087 aaKnown RBP36.31■■■■□ 3.4
KLHDC4-204ENST00000353170 BICRAQ9NZM4 1560 aa36■■■■□ 3.35
KLHDC4-204ENST00000353170 RSF1Q96T23 1441 aaPredicted RBP35.87■■■■□ 3.33
KLHDC4-204ENST00000353170 CECR2Q9BXF3 1484 aa35.84■■■■□ 3.33
KLHDC4-204ENST00000353170 PABPN1Q86U42 306 aaKnown RBP eCLIP35.8■■■■□ 3.32
KLHDC4-204ENST00000353170 BAZ1AQ9NRL2 1556 aaPredicted RBP35.78■■■■□ 3.32
KLHDC4-204ENST00000353170 MROH2BQ7Z745 1585 aa35.68■■■■□ 3.3
KLHDC4-204ENST00000353170 SMARCA4P51532 1647 aa35.55■■■■□ 3.28
KLHDC4-204ENST00000353170 WIZO95785 1651 aa35.39■■■■□ 3.26
KLHDC4-204ENST00000353170 PEG3Q9GZU2 1588 aa35.15■■■■□ 3.22
KLHDC4-204ENST00000353170 TOP2AP11388 1531 aaKnown RBP35.12■■■■□ 3.21
KLHDC4-204ENST00000353170 SMARCA2P51531 1590 aa35.02■■■■□ 3.2
KLHDC4-204ENST00000353170 EIF4G1Q04637 1599 aaKnown RBP34.98■■■■□ 3.19
KLHDC4-204ENST00000353170 ATAD2BQ9ULI0 1458 aa34.94■■■■□ 3.18
KLHDC4-204ENST00000353170 CHIC1Q5VXU3 224 aa34.79■■■■□ 3.16
KLHDC4-204ENST00000353170 BAZ1BQ9UIG0 1483 aaKnown RBP34.79■■■■□ 3.16
KLHDC4-204ENST00000353170 CCDC88BA6NC98 1476 aa34.7■■■■□ 3.14
KLHDC4-204ENST00000353170 HMGXB3Q12766 1538 aa34.67■■■■□ 3.14
KLHDC4-204ENST00000353170 NCAPD3P42695 1498 aa34.66■■■■□ 3.14
KLHDC4-204ENST00000353170 CC2D2AQ9P2K1 1620 aa34.43■■■■□ 3.1
KLHDC4-204ENST00000353170 TRIM41Q8WV44 630 aa34.22■■■■□ 3.07
KLHDC4-204ENST00000353170 ABCC8Q09428 1581 aa33.94■■■■□ 3.02
KLHDC4-204ENST00000353170 CFTRP13569 1480 aa33.9■■■■□ 3.02
KLHDC4-204ENST00000353170 WRNQ14191 1432 aaPredicted RBP eCLIP33.82■■■■□ 3
KLHDC4-204ENST00000353170 PRDM2Q13029 1718 aa33.79■■■■□ 3
KLHDC4-204ENST00000353170 CADPSQ9ULU8 1353 aa33.77■■■■□ 3
KLHDC4-204ENST00000353170 SYNJ1O43426 1573 aa33.61■■■□□ 2.97
KLHDC4-204ENST00000353170 TOP2BQ02880 1626 aa33.54■■■□□ 2.96
KLHDC4-204ENST00000353170 LAMC3Q9Y6N6 1575 aa33.52■■■□□ 2.96
KLHDC4-204ENST00000353170 BIVM-ERCC5R4GMW8 1640 aa33.51■■■□□ 2.96
KLHDC4-204ENST00000353170 EEA1Q15075 1411 aa33.49■■■□□ 2.95
KLHDC4-204ENST00000353170 FAM9AQ8IZU1 332 aaPredicted RBP33.48■■■□□ 2.95
KLHDC4-204ENST00000353170 FANCD2Q9BXW9 1451 aa33.39■■■□□ 2.94
KLHDC4-204ENST00000353170 LOC105371045A0A1W2PR82 267 aa33.39■■■□□ 2.94
KLHDC4-204ENST00000353170 CUX1P39880 1505 aa33.37■■■□□ 2.93
KLHDC4-204ENST00000353170 NESP48681 1621 aa33.34■■■□□ 2.93
KLHDC4-204ENST00000353170 SOGA1O94964 1423 aa33.31■■■□□ 2.92
KLHDC4-204ENST00000353170 DNAJC5BQ9UF47 199 aa33.3■■■□□ 2.92
KLHDC4-204ENST00000353170 PDS5BQ9NTI5 1447 aa33.28■■■□□ 2.92
KLHDC4-204ENST00000353170 CEP164Q9UPV0 1460 aa33.22■■■□□ 2.91
KLHDC4-204ENST00000353170 CSRNP3Q8WYN3 585 aa33.17■■■□□ 2.9
KLHDC4-204ENST00000353170 DNMBPQ6XZF7 1577 aa33.14■■■□□ 2.9
KLHDC4-204ENST00000353170 RUSC2Q8N2Y8 1516 aa33.14■■■□□ 2.9
KLHDC4-204ENST00000353170 FGD5Q6ZNL6 1462 aa33.03■■■□□ 2.88
KLHDC4-204ENST00000353170 TOPBP1Q92547 1522 aa33.03■■■□□ 2.88
KLHDC4-204ENST00000353170 KIF27Q86VH2 1401 aa33■■■□□ 2.87
KLHDC4-204ENST00000353170 KIF21AQ7Z4S6 1674 aa33■■■□□ 2.87
KLHDC4-204ENST00000353170 KIF21BO75037 1637 aa32.96■■■□□ 2.87
KLHDC4-204ENST00000353170 GOLGA3Q08378 1498 aa32.96■■■□□ 2.87
KLHDC4-204ENST00000353170 EHMT2Q96KQ7 1210 aa32.94■■■□□ 2.86
KLHDC4-204ENST00000353170 URB2Q14146 1524 aaKnown RBP32.92■■■□□ 2.86
KLHDC4-204ENST00000353170 POLA1P09884 1462 aaPredicted RBP32.86■■■□□ 2.85
KLHDC4-204ENST00000353170 CUX2O14529 1486 aa32.85■■■□□ 2.85
KLHDC4-204ENST00000353170 TNIKQ9UKE5 1360 aa32.84■■■□□ 2.85
KLHDC4-204ENST00000353170 MRC2Q9UBG0 1479 aa32.81■■■□□ 2.84
KLHDC4-204ENST00000353170 ABCA10Q8WWZ4 1543 aa32.78■■■□□ 2.84
KLHDC4-204ENST00000353170 UBTFP17480 764 aaKnown RBP32.77■■■□□ 2.84
KLHDC4-204ENST00000353170 ERICH3Q5RHP9 1530 aa32.76■■■□□ 2.83
KLHDC4-204ENST00000353170 PRXQ9BXM0 1461 aa32.73■■■□□ 2.83
KLHDC4-204ENST00000353170 RAD54L2Q9Y4B4 1467 aa32.7■■■□□ 2.82
KLHDC4-204ENST00000353170 ERCC6Q03468 1493 aa32.68■■■□□ 2.82
KLHDC4-204ENST00000353170 RAPGEF2Q9Y4G8 1499 aa32.67■■■□□ 2.82
KLHDC4-204ENST00000353170 WDR97A6NE52 1622 aa32.64■■■□□ 2.82
KLHDC4-204ENST00000353170 CEP162Q5TB80 1403 aa32.63■■■□□ 2.81
KLHDC4-204ENST00000353170 WDR62O43379 1518 aa32.61■■■□□ 2.81
KLHDC4-204ENST00000353170 IGF1RP08069 1367 aa32.61■■■□□ 2.81
KLHDC4-204ENST00000353170 TARBP1Q13395 1621 aaKnown RBP32.51■■■□□ 2.79
KLHDC4-204ENST00000353170 CARMIL1Q5VZK9 1371 aa32.5■■■□□ 2.79
KLHDC4-204ENST00000353170 ABCA5Q8WWZ7 1642 aa32.49■■■□□ 2.79
KLHDC4-204ENST00000353170 CUL7Q14999 1698 aa32.48■■■□□ 2.79
KLHDC4-204ENST00000353170 THOC2Q8NI27 1593 aaKnown RBP32.46■■■□□ 2.79
KLHDC4-204ENST00000353170 GAPVD1Q14C86 1478 aa32.44■■■□□ 2.78
KLHDC4-204ENST00000353170 IFT140Q96RY7 1462 aa32.44■■■□□ 2.78
KLHDC4-204ENST00000353170 CLIP1P30622 1438 aa32.39■■■□□ 2.78
KLHDC4-204ENST00000353170 TDRD9Q8NDG6 1382 aaKnown RBP32.38■■■□□ 2.77
KLHDC4-204ENST00000353170 PBRM1Q86U86 1689 aa32.24■■■□□ 2.75
KLHDC4-204ENST00000353170 GRIN2BQ13224 1484 aa32.2■■■□□ 2.75
KLHDC4-204ENST00000353170 AQRO60306 1485 aaKnown RBP eCLIP32.17■■■□□ 2.741e-8■■■□□ 16.7
KLHDC4-204ENST00000353170 VPS8Q8N3P4 1428 aa32.13■■■□□ 2.73
KLHDC4-204ENST00000353170 ZNF608Q9ULD9 1512 aaPredicted RBP32.11■■■□□ 2.73
KLHDC4-204ENST00000353170 FHAD1B1AJZ9 1412 aa32.11■■■□□ 2.73
KLHDC4-204ENST00000353170 RANGAP1P46060 587 aaPredicted RBP32.09■■■□□ 2.73
KLHDC4-204ENST00000353170 EIF4G3O43432 1585 aaKnown RBP32.09■■■□□ 2.73
KLHDC4-204ENST00000353170 TRIM26Q12899 539 aaPredicted RBP32.08■■■□□ 2.73
KLHDC4-204ENST00000353170 CTTNBP2Q8WZ74 1663 aa32.08■■■□□ 2.73
KLHDC4-204ENST00000353170 ADAMTS12P58397 1594 aa32.07■■■□□ 2.72
KLHDC4-204ENST00000353170 ARAP1Q96P48 1450 aa32.01■■■□□ 2.71
KLHDC4-204ENST00000353170 ARHGAP35Q9NRY4 1499 aa32■■■□□ 2.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms