RNA–Protein interactions for RNA: ENST00000533968.1

SPI1-204, Transcript of Spi-1 proto-oncogene, humanhuman

TSL 1 (best) BASIC

Gene SPI1, Length 1,290 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPI1-204ENST00000533968 NISCHQ9Y2I1 1504 aa49.42■■■■■ 5.5
SPI1-204ENST00000533968 CCDC180Q9P1Z9 1646 aa44.22■■■■■ 4.67
SPI1-204ENST00000533968 ABCC9O60706 1549 aa43.73■■■■■ 4.59
SPI1-204ENST00000533968 RB1CC1Q8TDY2 1594 aa41.88■■■■■ 4.3
SPI1-204ENST00000533968 NACADO15069 1562 aa41.67■■■■■ 4.26
SPI1-204ENST00000533968 DCAF8L2P0C7V8 631 aa41.61■■■■■ 4.25
SPI1-204ENST00000533968 MYO15BQ96JP2 1530 aa41.22■■■■■ 4.19
SPI1-204ENST00000533968 ZCCHC6Q5VYS8 1495 aaKnown RBP41.06■■■■■ 4.16
SPI1-204ENST00000533968 UNC13AQ9UPW8 1703 aa40.9■■■■■ 4.14
SPI1-204ENST00000533968 DCAF1Q9Y4B6 1507 aa40.86■■■■■ 4.13
SPI1-204ENST00000533968 PABPN1Q86U42 306 aaKnown RBP eCLIP40.75■■■■■ 4.11
SPI1-204ENST00000533968 BICRAQ9NZM4 1560 aa40.52■■■■■ 4.08
SPI1-204ENST00000533968 DNAJC5BQ9UF47 199 aa40.47■■■■■ 4.07
SPI1-204ENST00000533968 SCRIBQ14160 1630 aa40.31■■■■■ 4.04
SPI1-204ENST00000533968 SHROOM4Q9ULL8 1493 aa40.13■■■■■ 4.02
SPI1-204ENST00000533968 EIF4G1Q04637 1599 aaKnown RBP39.56■■■■□ 3.92
SPI1-204ENST00000533968 CC2D2AQ9P2K1 1620 aa39.53■■■■□ 3.92
SPI1-204ENST00000533968 CECR2Q9BXF3 1484 aa39.35■■■■□ 3.89
SPI1-204ENST00000533968 SMARCA4P51532 1647 aa38.49■■■■□ 3.75
SPI1-204ENST00000533968 NCAPD3P42695 1498 aa38.41■■■■□ 3.74
SPI1-204ENST00000533968 BAZ1AQ9NRL2 1556 aaPredicted RBP38.4■■■■□ 3.74
SPI1-204ENST00000533968 ATAD2BQ9ULI0 1458 aa38.36■■■■□ 3.73
SPI1-204ENST00000533968 SMARCA2P51531 1590 aa38.36■■■■□ 3.73
SPI1-204ENST00000533968 HMGXB3Q12766 1538 aa38.22■■■■□ 3.71
SPI1-204ENST00000533968 BAZ1BQ9UIG0 1483 aaKnown RBP38.09■■■■□ 3.69
SPI1-204ENST00000533968 PEG3Q9GZU2 1588 aa38.07■■■■□ 3.69
SPI1-204ENST00000533968 MROH2BQ7Z745 1585 aa38.06■■■■□ 3.68
SPI1-204ENST00000533968 ERCC6Q03468 1493 aa37.81■■■■□ 3.64
SPI1-204ENST00000533968 WIZO95785 1651 aa37.67■■■■□ 3.62
SPI1-204ENST00000533968 NESP48681 1621 aa37.65■■■■□ 3.62
SPI1-204ENST00000533968 LAMC3Q9Y6N6 1575 aa37.55■■■■□ 3.6
SPI1-204ENST00000533968 CUX2O14529 1486 aa37.53■■■■□ 3.6
SPI1-204ENST00000533968 RSF1Q96T23 1441 aaPredicted RBP37.44■■■■□ 3.58
SPI1-204ENST00000533968 PDS5BQ9NTI5 1447 aa37.32■■■■□ 3.56
SPI1-204ENST00000533968 CADPSQ9ULU8 1353 aa37.29■■■■□ 3.56
SPI1-204ENST00000533968 KIF21AQ7Z4S6 1674 aa37.26■■■■□ 3.56
SPI1-204ENST00000533968 TOP2AP11388 1531 aaKnown RBP37.24■■■■□ 3.55
SPI1-204ENST00000533968 THOC2Q8NI27 1593 aaKnown RBP37.22■■■■□ 3.55
SPI1-204ENST00000533968 MRC2Q9UBG0 1479 aa36.95■■■■□ 3.51
SPI1-204ENST00000533968 CFTRP13569 1480 aa36.94■■■■□ 3.5
SPI1-204ENST00000533968 CEP164Q9UPV0 1460 aa36.93■■■■□ 3.5
SPI1-204ENST00000533968 DNAJC5Q9H3Z4 198 aa36.91■■■■□ 3.5
SPI1-204ENST00000533968 FANCD2Q9BXW9 1451 aa36.89■■■■□ 3.5
SPI1-204ENST00000533968 WDR62O43379 1518 aa36.83■■■■□ 3.49
SPI1-204ENST00000533968 CCDC88BA6NC98 1476 aa36.77■■■■□ 3.48
SPI1-204ENST00000533968 PRDM2Q13029 1718 aa36.73■■■■□ 3.47
SPI1-204ENST00000533968 URB2Q14146 1524 aaKnown RBP36.51■■■■□ 3.44
SPI1-204ENST00000533968 ABCC8Q09428 1581 aa36.24■■■■□ 3.39
SPI1-204ENST00000533968 TOPBP1Q92547 1522 aa36.23■■■■□ 3.39
SPI1-204ENST00000533968 SUPT5HO00267 1087 aaKnown RBP36.2■■■■□ 3.39
SPI1-204ENST00000533968 DNMBPQ6XZF7 1577 aa36.17■■■■□ 3.38
SPI1-204ENST00000533968 IFT140Q96RY7 1462 aa36.15■■■■□ 3.38
SPI1-204ENST00000533968 ZNF608Q9ULD9 1512 aaPredicted RBP35.98■■■■□ 3.35
SPI1-204ENST00000533968 OSCARQ8IYS5 282 aa35.89■■■■□ 3.34
SPI1-204ENST00000533968 POLA1P09884 1462 aaPredicted RBP35.88■■■■□ 3.33
SPI1-204ENST00000533968 EIF4G3O43432 1585 aaKnown RBP35.88■■■■□ 3.33
SPI1-204ENST00000533968 TARBP1Q13395 1621 aaKnown RBP35.86■■■■□ 3.33
SPI1-204ENST00000533968 CUX1P39880 1505 aa35.75■■■■□ 3.31
SPI1-204ENST00000533968 SOGA1O94964 1423 aa35.74■■■■□ 3.31
SPI1-204ENST00000533968 FGD5Q6ZNL6 1462 aa35.74■■■■□ 3.31
SPI1-204ENST00000533968 AQRO60306 1485 aaKnown RBP eCLIP35.73■■■■□ 3.316e-6■■■■□ 25.1
SPI1-204ENST00000533968 RAD54L2Q9Y4B4 1467 aa35.73■■■■□ 3.31
SPI1-204ENST00000533968 WDR97A6NE52 1622 aa35.61■■■■□ 3.29
SPI1-204ENST00000533968 TDRD9Q8NDG6 1382 aaKnown RBP35.59■■■■□ 3.29
SPI1-204ENST00000533968 TRIM41Q8WV44 630 aa35.58■■■■□ 3.29
SPI1-204ENST00000533968 CHD1O14646 1710 aa35.54■■■■□ 3.28
SPI1-204ENST00000533968 FBLN2P98095 1184 aa35.5■■■■□ 3.27
SPI1-204ENST00000533968 SNAPC4Q5SXM2 1469 aa35.42■■■■□ 3.26
SPI1-204ENST00000533968 GRIN2BQ13224 1484 aa35.4■■■■□ 3.26
SPI1-204ENST00000533968 WRNQ14191 1432 aaPredicted RBP eCLIP35.38■■■■□ 3.25
SPI1-204ENST00000533968 RIMBP3CA6NJZ7 1639 aa35.37■■■■□ 3.25
SPI1-204ENST00000533968 RIMBP3BA6NNM3 1639 aa35.37■■■■□ 3.25
SPI1-204ENST00000533968 RIMBP3Q9UFD9 1639 aa35.37■■■■□ 3.25
SPI1-204ENST00000533968 MAGI1Q96QZ7 1491 aaPredicted RBP35.36■■■■□ 3.25
SPI1-204ENST00000533968 ABCA10Q8WWZ4 1543 aa35.35■■■■□ 3.25
SPI1-204ENST00000533968 BIVM-ERCC5R4GMW8 1640 aa35.35■■■■□ 3.25
SPI1-204ENST00000533968 TOP2BQ02880 1626 aa35.34■■■■□ 3.25
SPI1-204ENST00000533968 GAPVD1Q14C86 1478 aa35.34■■■■□ 3.25
SPI1-204ENST00000533968 PBRM1Q86U86 1689 aa35.33■■■■□ 3.25
SPI1-204ENST00000533968 CHMP7Q8WUX9 453 aaPredicted RBP35.3■■■■□ 3.24
SPI1-204ENST00000533968 ARHGEF11O15085 1522 aa35.3■■■■□ 3.24
SPI1-204ENST00000533968 SYNJ1O43426 1573 aa35.29■■■■□ 3.24
SPI1-204ENST00000533968 ABCA5Q8WWZ7 1642 aa35.26■■■■□ 3.24
SPI1-204ENST00000533968 SYNJ2O15056 1496 aa35.22■■■■□ 3.23
SPI1-204ENST00000533968 CLASP1Q7Z460 1538 aa35.08■■■■□ 3.21
SPI1-204ENST00000533968 CYB5RLQ6IPT4 315 aa35.01■■■■□ 3.2
SPI1-204ENST00000533968 ADAMTS12P58397 1594 aa34.99■■■■□ 3.19
SPI1-204ENST00000533968 ARAP1Q96P48 1450 aa34.96■■■■□ 3.19
SPI1-204ENST00000533968 ERICH3Q5RHP9 1530 aa34.95■■■■□ 3.19
SPI1-204ENST00000533968 GRIN2AQ12879 1464 aa34.93■■■■□ 3.18
SPI1-204ENST00000533968 FHAD1B1AJZ9 1412 aa34.9■■■■□ 3.18
SPI1-204ENST00000533968 CEP170Q5SW79 1584 aa34.77■■■■□ 3.16
SPI1-204ENST00000533968 NUP160Q12769 1436 aa34.76■■■■□ 3.16
SPI1-204ENST00000533968 KIF27Q86VH2 1401 aa34.7■■■■□ 3.15
SPI1-204ENST00000533968 CUL7Q14999 1698 aa34.57■■■■□ 3.13
SPI1-204ENST00000533968 SHROOM2Q13796 1616 aa34.57■■■■□ 3.12
SPI1-204ENST00000533968 TRHP20396 242 aaPredicted RBP34.55■■■■□ 3.12
SPI1-204ENST00000533968 ERCC6L2Q5T890 1561 aa34.53■■■■□ 3.12
SPI1-204ENST00000533968 IGF1RP08069 1367 aa34.53■■■■□ 3.12
SPI1-204ENST00000533968 RUSC2Q8N2Y8 1516 aa34.48■■■■□ 3.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms