RNA–Protein interactions for RNA: ENST00000392347.5

CCDC57-206, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC57, Length 3,000 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-206ENST00000392347 NISCHQ9Y2I1 1504 aa25.49■■□□□ 1.67
CCDC57-206ENST00000392347 HRCP23327 699 aa22.78■■□□□ 1.24
CCDC57-206ENST00000392347 SHROOM4Q9ULL8 1493 aa22.74■■□□□ 1.23
CCDC57-206ENST00000392347 SUPT5HO00267 1087 aaKnown RBP22.69■■□□□ 1.22
CCDC57-206ENST00000392347 PPARGC1BQ86YN6 1023 aaKnown RBP22.57■■□□□ 1.2
CCDC57-206ENST00000392347 PCGF6Q9BYE7 350 aa22.52■■□□□ 1.2
CCDC57-206ENST00000392347 MYO15BQ96JP2 1530 aa22.24■■□□□ 1.15
CCDC57-206ENST00000392347 CHIC1Q5VXU3 224 aa22.13■■□□□ 1.13
CCDC57-206ENST00000392347 DCAF8L2P0C7V8 631 aa21.89■■□□□ 1.1
CCDC57-206ENST00000392347 PELP1Q8IZL8 1130 aaKnown RBP21.83■■□□□ 1.08
CCDC57-206ENST00000392347 LOC105371045A0A1W2PR82 267 aa21.82■■□□□ 1.08
CCDC57-206ENST00000392347 CCDC180Q9P1Z9 1646 aa21.81■■□□□ 1.08
CCDC57-206ENST00000392347 SCAF1Q9H7N4 1312 aaKnown RBP21.65■■□□□ 1.06
CCDC57-206ENST00000392347 ZCCHC6Q5VYS8 1495 aaKnown RBP21.6■■□□□ 1.05
CCDC57-206ENST00000392347 TRIM26Q12899 539 aaPredicted RBP21.58■■□□□ 1.05
CCDC57-206ENST00000392347 DCAF1Q9Y4B6 1507 aa21.54■■□□□ 1.04
CCDC57-206ENST00000392347 ZEB1P37275 1124 aaPredicted RBP21.3■■□□□ 1
CCDC57-206ENST00000392347 EHMT2Q96KQ7 1210 aa21.14■□□□□ 0.98
CCDC57-206ENST00000392347 NEUROD1Q13562 356 aa21.09■□□□□ 0.97
CCDC57-206ENST00000392347 FAM9AQ8IZU1 332 aaPredicted RBP21.06■□□□□ 0.96
CCDC57-206ENST00000392347 ACIN1Q9UKV3 1341 aaKnown RBP21.05■□□□□ 0.96
CCDC57-206ENST00000392347 GTF3C3Q9Y5Q9 886 aa20.99■□□□□ 0.95
CCDC57-206ENST00000392347 MYT1Q01538 1121 aa20.9■□□□□ 0.94
CCDC57-206ENST00000392347 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.88■□□□□ 0.93
CCDC57-206ENST00000392347 TRIM41Q8WV44 630 aa20.84■□□□□ 0.93
CCDC57-206ENST00000392347 CCER1Q8TC90 406 aaPredicted RBP20.78■□□□□ 0.92
CCDC57-206ENST00000392347 CENPBP07199 599 aaPredicted RBP20.75■□□□□ 0.91
CCDC57-206ENST00000392347 DIEXFQ68CQ4 756 aaKnown RBP20.75■□□□□ 0.91
CCDC57-206ENST00000392347 ABCC9O60706 1549 aa20.7■□□□□ 0.9
CCDC57-206ENST00000392347 YTHDC1Q96MU7 727 aaKnown RBP20.61■□□□□ 0.89
CCDC57-206ENST00000392347 TTBK1Q5TCY1 1321 aaPredicted RBP20.6■□□□□ 0.89
CCDC57-206ENST00000392347 SCRIBQ14160 1630 aa20.46■□□□□ 0.87
CCDC57-206ENST00000392347 RSF1Q96T23 1441 aaPredicted RBP20.34■□□□□ 0.85
CCDC57-206ENST00000392347 ZNF316A6NFI3 1004 aaPredicted RBP20.28■□□□□ 0.84
CCDC57-206ENST00000392347 MIER1Q8N108 512 aa20.27■□□□□ 0.83
CCDC57-206ENST00000392347 RB1CC1Q8TDY2 1594 aa20.26■□□□□ 0.83
CCDC57-206ENST00000392347 NACADO15069 1562 aa20.09■□□□□ 0.81
CCDC57-206ENST00000392347 CECR2Q9BXF3 1484 aa20.03■□□□□ 0.8
CCDC57-206ENST00000392347 HNRNPUL2Q1KMD3 747 aaKnown RBP19.98■□□□□ 0.79
CCDC57-206ENST00000392347 PABPN1Q86U42 306 aaKnown RBP eCLIP19.96■□□□□ 0.79
CCDC57-206ENST00000392347 BCL11AQ9H165 835 aa19.92■□□□□ 0.78
CCDC57-206ENST00000392347 SUPT16HQ9Y5B9 1047 aaKnown RBP19.9■□□□□ 0.78
CCDC57-206ENST00000392347 CEP162Q5TB80 1403 aa19.84■□□□□ 0.77
CCDC57-206ENST00000392347 UBTFP17480 764 aaKnown RBP19.84■□□□□ 0.77
CCDC57-206ENST00000392347 TSHZ2Q9NRE2 1034 aa19.82■□□□□ 0.76
CCDC57-206ENST00000392347 ANP32EQ9BTT0 268 aa19.82■□□□□ 0.76
CCDC57-206ENST00000392347 MROH2BQ7Z745 1585 aa19.81■□□□□ 0.76
CCDC57-206ENST00000392347 WRNQ14191 1432 aaPredicted RBP eCLIP19.79■□□□□ 0.76
CCDC57-206ENST00000392347 CSRNP3Q8WYN3 585 aa19.74■□□□□ 0.75
CCDC57-206ENST00000392347 BCANQ96GW7 911 aa19.7■□□□□ 0.74
CCDC57-206ENST00000392347 WIZO95785 1651 aa19.7■□□□□ 0.74
CCDC57-206ENST00000392347 CCDC88BA6NC98 1476 aa19.69■□□□□ 0.74
CCDC57-206ENST00000392347 SOGA1O94964 1423 aa19.67■□□□□ 0.74
CCDC57-206ENST00000392347 ABCC8Q09428 1581 aa19.65■□□□□ 0.74
CCDC57-206ENST00000392347 TNIKQ9UKE5 1360 aa19.63■□□□□ 0.73
CCDC57-206ENST00000392347 BAZ1AQ9NRL2 1556 aaPredicted RBP19.63■□□□□ 0.73
CCDC57-206ENST00000392347 RANGAP1P46060 587 aaPredicted RBP19.61■□□□□ 0.73
CCDC57-206ENST00000392347 EIF4G1Q04637 1599 aaKnown RBP19.57■□□□□ 0.72
CCDC57-206ENST00000392347 RUSC2Q8N2Y8 1516 aa19.57■□□□□ 0.72
CCDC57-206ENST00000392347 KCNH8Q96L42 1107 aa19.56■□□□□ 0.72
CCDC57-206ENST00000392347 CLSPNQ9HAW4 1339 aa19.55■□□□□ 0.72
CCDC57-206ENST00000392347 UNC13AQ9UPW8 1703 aa19.53■□□□□ 0.72
CCDC57-206ENST00000392347 APLP2Q06481 763 aa19.47■□□□□ 0.71
CCDC57-206ENST00000392347 FKBP8Q14318 412 aa19.46■□□□□ 0.71
CCDC57-206ENST00000392347 SMARCA4P51532 1647 aa19.43■□□□□ 0.7
CCDC57-206ENST00000392347 TOP2AP11388 1531 aaKnown RBP19.42■□□□□ 0.7
CCDC57-206ENST00000392347 ITGAEP38570 1179 aa19.38■□□□□ 0.69
CCDC57-206ENST00000392347 RBM19Q9Y4C8 960 aaKnown RBP19.37■□□□□ 0.69
CCDC57-206ENST00000392347 GOLGA3Q08378 1498 aa19.36■□□□□ 0.69
CCDC57-206ENST00000392347 DHX57Q6P158 1386 aaKnown RBP19.33■□□□□ 0.68
CCDC57-206ENST00000392347 CLIP1P30622 1438 aa19.31■□□□□ 0.68
CCDC57-206ENST00000392347 SMARCA2P51531 1590 aa19.31■□□□□ 0.68
CCDC57-206ENST00000392347 BICRAQ9NZM4 1560 aa19.28■□□□□ 0.68
CCDC57-206ENST00000392347 EEA1Q15075 1411 aa19.26■□□□□ 0.67
CCDC57-206ENST00000392347 DDX10Q13206 875 aaKnown RBP19.22■□□□□ 0.67
CCDC57-206ENST00000392347 TRIM52Q96A61 297 aa19.22■□□□□ 0.67
CCDC57-206ENST00000392347 VPS8Q8N3P4 1428 aa19.22■□□□□ 0.67
CCDC57-206ENST00000392347 MSH5O43196 834 aa19.22■□□□□ 0.67
CCDC57-206ENST00000392347 NEFLP07196 543 aa19.22■□□□□ 0.67
CCDC57-206ENST00000392347 PEG3Q9GZU2 1588 aa19.18■□□□□ 0.66
CCDC57-206ENST00000392347 KANK4Q5T7N3 995 aaPredicted RBP19.15■□□□□ 0.66
CCDC57-206ENST00000392347 HIRIP3Q9BW71 556 aaPredicted RBP19.15■□□□□ 0.66
CCDC57-206ENST00000392347 CEP164Q9UPV0 1460 aa19.13■□□□□ 0.65
CCDC57-206ENST00000392347 ERICH6Q7L0X2 663 aa19.09■□□□□ 0.65
CCDC57-206ENST00000392347 PRKCSHP14314 528 aaPredicted RBP19.08■□□□□ 0.65
CCDC57-206ENST00000392347 RAPGEF2Q9Y4G8 1499 aa19.07■□□□□ 0.64
CCDC57-206ENST00000392347 IRX6P78412 446 aaPredicted RBP19.06■□□□□ 0.64
CCDC57-206ENST00000392347 KIF21BO75037 1637 aa19.02■□□□□ 0.64
CCDC57-206ENST00000392347 SIN3AQ96ST3 1273 aa19■□□□□ 0.63
CCDC57-206ENST00000392347 ATAD2BQ9ULI0 1458 aa18.94■□□□□ 0.62
CCDC57-206ENST00000392347 ANP32CO43423 234 aa18.92■□□□□ 0.62
CCDC57-206ENST00000392347 PPP1R15AO75807 674 aaPredicted RBP18.92■□□□□ 0.62
CCDC57-206ENST00000392347 CDK11AQ9UQ88 783 aaPredicted RBP18.92■□□□□ 0.62
CCDC57-206ENST00000392347 SYNJ1O43426 1573 aa18.92■□□□□ 0.62
CCDC57-206ENST00000392347 BAZ1BQ9UIG0 1483 aaKnown RBP18.92■□□□□ 0.62
CCDC57-206ENST00000392347 RAB3GAP2Q9H2M9 1393 aa18.89■□□□□ 0.61
CCDC57-206ENST00000392347 DEKP35659 375 aaKnown RBP18.87■□□□□ 0.61
CCDC57-206ENST00000392347 FANCIQ9NVI1 1328 aa18.87■□□□□ 0.61
CCDC57-206ENST00000392347 CCNB3Q8WWL7 1395 aa18.87■□□□□ 0.61
CCDC57-206ENST00000392347 WDR97A6NE52 1622 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms