RNA–Protein interactions for RNA: ENST00000582040.1

CCDC57-214, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 330 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-214ENST00000582040 NISCHQ9Y2I1 1504 aa36.13■■■■□ 3.38
CCDC57-214ENST00000582040 CCDC180Q9P1Z9 1646 aa32.47■■■□□ 2.79
CCDC57-214ENST00000582040 ABCC9O60706 1549 aa32.38■■■□□ 2.77
CCDC57-214ENST00000582040 RB1CC1Q8TDY2 1594 aa30.85■■■□□ 2.53
CCDC57-214ENST00000582040 NACADO15069 1562 aa30.63■■■□□ 2.49
CCDC57-214ENST00000582040 DCAF8L2P0C7V8 631 aa30.4■■■□□ 2.46
CCDC57-214ENST00000582040 DNAJC5BQ9UF47 199 aa30.26■■■□□ 2.43
CCDC57-214ENST00000582040 MYO15BQ96JP2 1530 aa30.22■■■□□ 2.43
CCDC57-214ENST00000582040 UNC13AQ9UPW8 1703 aa30.18■■■□□ 2.42
CCDC57-214ENST00000582040 PABPN1Q86U42 306 aaKnown RBP eCLIP30.09■■■□□ 2.41
CCDC57-214ENST00000582040 ZCCHC6Q5VYS8 1495 aaKnown RBP29.99■■■□□ 2.39
CCDC57-214ENST00000582040 BICRAQ9NZM4 1560 aa29.96■■■□□ 2.39
CCDC57-214ENST00000582040 DCAF1Q9Y4B6 1507 aa29.86■■■□□ 2.37
CCDC57-214ENST00000582040 SCRIBQ14160 1630 aa29.59■■■□□ 2.33
CCDC57-214ENST00000582040 SHROOM4Q9ULL8 1493 aa29.56■■■□□ 2.32
CCDC57-214ENST00000582040 CC2D2AQ9P2K1 1620 aa29.26■■■□□ 2.27
CCDC57-214ENST00000582040 EIF4G1Q04637 1599 aaKnown RBP29.22■■■□□ 2.27
CCDC57-214ENST00000582040 CECR2Q9BXF3 1484 aa29.16■■■□□ 2.26
CCDC57-214ENST00000582040 NCAPD3P42695 1498 aa28.25■■■□□ 2.11
CCDC57-214ENST00000582040 SMARCA4P51532 1647 aa28.22■■■□□ 2.11
CCDC57-214ENST00000582040 ATAD2BQ9ULI0 1458 aa28.19■■■□□ 2.1
CCDC57-214ENST00000582040 SMARCA2P51531 1590 aa28.14■■■□□ 2.1
CCDC57-214ENST00000582040 HMGXB3Q12766 1538 aa28.11■■■□□ 2.09
CCDC57-214ENST00000582040 BAZ1AQ9NRL2 1556 aaPredicted RBP28.07■■■□□ 2.08
CCDC57-214ENST00000582040 ERCC6Q03468 1493 aa27.95■■■□□ 2.07
CCDC57-214ENST00000582040 BAZ1BQ9UIG0 1483 aaKnown RBP27.95■■■□□ 2.06
CCDC57-214ENST00000582040 PEG3Q9GZU2 1588 aa27.93■■■□□ 2.06
CCDC57-214ENST00000582040 CUX2O14529 1486 aa27.89■■■□□ 2.05
CCDC57-214ENST00000582040 MROH2BQ7Z745 1585 aa27.86■■■□□ 2.05
CCDC57-214ENST00000582040 NESP48681 1621 aa27.83■■■□□ 2.05
CCDC57-214ENST00000582040 DNAJC5Q9H3Z4 198 aa27.74■■■□□ 2.03
CCDC57-214ENST00000582040 LAMC3Q9Y6N6 1575 aa27.65■■■□□ 2.02
CCDC57-214ENST00000582040 THOC2Q8NI27 1593 aaKnown RBP27.59■■■□□ 2.01
CCDC57-214ENST00000582040 WIZO95785 1651 aa27.54■■■□□ 2
CCDC57-214ENST00000582040 KIF21AQ7Z4S6 1674 aa27.52■■■□□ 2
CCDC57-214ENST00000582040 PDS5BQ9NTI5 1447 aa27.45■■□□□ 1.98
CCDC57-214ENST00000582040 CADPSQ9ULU8 1353 aa27.38■■□□□ 1.97
CCDC57-214ENST00000582040 RSF1Q96T23 1441 aaPredicted RBP27.26■■□□□ 1.95
CCDC57-214ENST00000582040 MRC2Q9UBG0 1479 aa27.25■■□□□ 1.95
CCDC57-214ENST00000582040 TOP2AP11388 1531 aaKnown RBP27.21■■□□□ 1.95
CCDC57-214ENST00000582040 WDR62O43379 1518 aa27.2■■□□□ 1.94
CCDC57-214ENST00000582040 CEP164Q9UPV0 1460 aa27.16■■□□□ 1.94
CCDC57-214ENST00000582040 FANCD2Q9BXW9 1451 aa27.12■■□□□ 1.93
CCDC57-214ENST00000582040 CFTRP13569 1480 aa27.11■■□□□ 1.93
CCDC57-214ENST00000582040 PRDM2Q13029 1718 aa26.91■■□□□ 1.9
CCDC57-214ENST00000582040 URB2Q14146 1524 aaKnown RBP26.9■■□□□ 1.9
CCDC57-214ENST00000582040 CCDC88BA6NC98 1476 aa26.85■■□□□ 1.89
CCDC57-214ENST00000582040 TOPBP1Q92547 1522 aa26.62■■□□□ 1.85
CCDC57-214ENST00000582040 IFT140Q96RY7 1462 aa26.6■■□□□ 1.85
CCDC57-214ENST00000582040 TRIM41Q8WV44 630 aa26.58■■□□□ 1.85
CCDC57-214ENST00000582040 ZNF608Q9ULD9 1512 aaPredicted RBP26.55■■□□□ 1.84
CCDC57-214ENST00000582040 DNMBPQ6XZF7 1577 aa26.54■■□□□ 1.84
CCDC57-214ENST00000582040 OSCARQ8IYS5 282 aa26.53■■□□□ 1.84
CCDC57-214ENST00000582040 ABCC8Q09428 1581 aa26.52■■□□□ 1.84
CCDC57-214ENST00000582040 EIF4G3O43432 1585 aaKnown RBP26.46■■□□□ 1.83
CCDC57-214ENST00000582040 TARBP1Q13395 1621 aaKnown RBP26.39■■□□□ 1.81
CCDC57-214ENST00000582040 POLA1P09884 1462 aaPredicted RBP26.36■■□□□ 1.81
CCDC57-214ENST00000582040 RIMBP3CA6NJZ7 1639 aa26.3■■□□□ 1.8
CCDC57-214ENST00000582040 RIMBP3BA6NNM3 1639 aa26.3■■□□□ 1.8
CCDC57-214ENST00000582040 RIMBP3Q9UFD9 1639 aa26.3■■□□□ 1.8
CCDC57-214ENST00000582040 AQRO60306 1485 aaKnown RBP eCLIP26.3■■□□□ 1.8
CCDC57-214ENST00000582040 CHD1O14646 1710 aa26.25■■□□□ 1.79
CCDC57-214ENST00000582040 RAD54L2Q9Y4B4 1467 aa26.23■■□□□ 1.79
CCDC57-214ENST00000582040 ARHGEF11O15085 1522 aa26.21■■□□□ 1.79
CCDC57-214ENST00000582040 FGD5Q6ZNL6 1462 aa26.2■■□□□ 1.78
CCDC57-214ENST00000582040 SOGA1O94964 1423 aa26.18■■□□□ 1.78
CCDC57-214ENST00000582040 CUX1P39880 1505 aa26.18■■□□□ 1.78
CCDC57-214ENST00000582040 TDRD9Q8NDG6 1382 aaKnown RBP26.13■■□□□ 1.77
CCDC57-214ENST00000582040 WDR97A6NE52 1622 aa26.12■■□□□ 1.77
CCDC57-214ENST00000582040 FBLN2P98095 1184 aa26.08■■□□□ 1.77
CCDC57-214ENST00000582040 SNAPC4Q5SXM2 1469 aa26.07■■□□□ 1.76
CCDC57-214ENST00000582040 SUPT5HO00267 1087 aaKnown RBP26.06■■□□□ 1.76
CCDC57-214ENST00000582040 MAGI1Q96QZ7 1491 aaPredicted RBP25.99■■□□□ 1.75
CCDC57-214ENST00000582040 GRIN2BQ13224 1484 aa25.98■■□□□ 1.75
CCDC57-214ENST00000582040 ARAP1Q96P48 1450 aa25.97■■□□□ 1.75
CCDC57-214ENST00000582040 PBRM1Q86U86 1689 aa25.94■■□□□ 1.74
CCDC57-214ENST00000582040 CLASP1Q7Z460 1538 aa25.93■■□□□ 1.74
CCDC57-214ENST00000582040 CYB5RLQ6IPT4 315 aa25.92■■□□□ 1.74
CCDC57-214ENST00000582040 SYNJ1O43426 1573 aa25.91■■□□□ 1.74
CCDC57-214ENST00000582040 SYNJ2O15056 1496 aa25.9■■□□□ 1.74
CCDC57-214ENST00000582040 ABCA10Q8WWZ4 1543 aa25.89■■□□□ 1.74
CCDC57-214ENST00000582040 ABCA5Q8WWZ7 1642 aa25.89■■□□□ 1.74
CCDC57-214ENST00000582040 CHMP7Q8WUX9 453 aaPredicted RBP25.89■■□□□ 1.74
CCDC57-214ENST00000582040 GAPVD1Q14C86 1478 aa25.89■■□□□ 1.73
CCDC57-214ENST00000582040 BIVM-ERCC5R4GMW8 1640 aa25.8■■□□□ 1.72
CCDC57-214ENST00000582040 TOP2BQ02880 1626 aa25.77■■□□□ 1.72
CCDC57-214ENST00000582040 WRNQ14191 1432 aaPredicted RBP eCLIP25.77■■□□□ 1.72
CCDC57-214ENST00000582040 ADAMTS12P58397 1594 aa25.7■■□□□ 1.71
CCDC57-214ENST00000582040 GRIN2AQ12879 1464 aa25.66■■□□□ 1.7
CCDC57-214ENST00000582040 TRHP20396 242 aaPredicted RBP25.63■■□□□ 1.69
CCDC57-214ENST00000582040 CEP170Q5SW79 1584 aa25.59■■□□□ 1.69
CCDC57-214ENST00000582040 ERICH3Q5RHP9 1530 aa25.57■■□□□ 1.68
CCDC57-214ENST00000582040 FHAD1B1AJZ9 1412 aa25.56■■□□□ 1.68
CCDC57-214ENST00000582040 NUP160Q12769 1436 aa25.56■■□□□ 1.68
CCDC57-214ENST00000582040 ERCC6L2Q5T890 1561 aa25.53■■□□□ 1.68
CCDC57-214ENST00000582040 SHROOM2Q13796 1616 aa25.48■■□□□ 1.67
CCDC57-214ENST00000582040 RUSC2Q8N2Y8 1516 aa25.34■■□□□ 1.65
CCDC57-214ENST00000582040 PRG4Q92954 1404 aaPredicted RBP25.3■■□□□ 1.64
CCDC57-214ENST00000582040 CUL7Q14999 1698 aa25.23■■□□□ 1.63
CCDC57-214ENST00000582040 KIF27Q86VH2 1401 aa25.23■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms