RNA–Protein interactions for RNA: ENST00000401874.6

TSC2-204, Transcript of TSC complex subunit 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSC2, Length 5,421 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC2-204ENST00000401874 DCAF8L2P0C7V8 631 aa28.4■■■□□ 2.14
TSC2-204ENST00000401874 NISCHQ9Y2I1 1504 aa28.06■■■□□ 2.08
TSC2-204ENST00000401874 SUPT5HO00267 1087 aaKnown RBP27.49■■□□□ 1.99
TSC2-204ENST00000401874 SHROOM4Q9ULL8 1493 aa26.99■■□□□ 1.91
TSC2-204ENST00000401874 PELP1Q8IZL8 1130 aaKnown RBP26.31■■□□□ 1.8
TSC2-204ENST00000401874 EHMT2Q96KQ7 1210 aa26.3■■□□□ 1.8
TSC2-204ENST00000401874 APLP2Q06481 763 aa26.04■■□□□ 1.76
TSC2-204ENST00000401874 PCGF6Q9BYE7 350 aa26■■□□□ 1.75
TSC2-204ENST00000401874 FAM9AQ8IZU1 332 aaPredicted RBP25.84■■□□□ 1.73
TSC2-204ENST00000401874 ZEB1P37275 1124 aaPredicted RBP25.8■■□□□ 1.72
TSC2-204ENST00000401874 CENPBP07199 599 aaPredicted RBP25.6■■□□□ 1.69
TSC2-204ENST00000401874 TRIM41Q8WV44 630 aa25.55■■□□□ 1.68
TSC2-204ENST00000401874 TTBK1Q5TCY1 1321 aaPredicted RBP25.52■■□□□ 1.68
TSC2-204ENST00000401874 CCER1Q8TC90 406 aaPredicted RBP25.43■■□□□ 1.66
TSC2-204ENST00000401874 RANGAP1P46060 587 aaPredicted RBP25.11■■□□□ 1.61
TSC2-204ENST00000401874 UBTFP17480 764 aaKnown RBP25.11■■□□□ 1.61
TSC2-204ENST00000401874 ERICH6Q7L0X2 663 aa25.09■■□□□ 1.61
TSC2-204ENST00000401874 TRIM26Q12899 539 aaPredicted RBP25.06■■□□□ 1.6
TSC2-204ENST00000401874 HRCP23327 699 aa25■■□□□ 1.59
TSC2-204ENST00000401874 MYT1Q01538 1121 aa24.98■■□□□ 1.59
TSC2-204ENST00000401874 ATP1B4Q9UN42 357 aaPredicted RBP24.87■■□□□ 1.57
TSC2-204ENST00000401874 NEFLP07196 543 aa24.86■■□□□ 1.57
TSC2-204ENST00000401874 YTHDC1Q96MU7 727 aaKnown RBP24.83■■□□□ 1.57
TSC2-204ENST00000401874 CHIC1Q5VXU3 224 aa24.76■■□□□ 1.55
TSC2-204ENST00000401874 PPARGC1BQ86YN6 1023 aaKnown RBP24.73■■□□□ 1.55
TSC2-204ENST00000401874 LOC105371045A0A1W2PR82 267 aa24.59■■□□□ 1.53
TSC2-204ENST00000401874 HNRNPUL2Q1KMD3 747 aaKnown RBP24.27■■□□□ 1.48
TSC2-204ENST00000401874 ITGAEP38570 1179 aa24.24■■□□□ 1.47
TSC2-204ENST00000401874 DIEXFQ68CQ4 756 aaKnown RBP24.15■■□□□ 1.46
TSC2-204ENST00000401874 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.13■■□□□ 1.45
TSC2-204ENST00000401874 DAXXQ9UER7 740 aaPredicted RBP23.99■■□□□ 1.43
TSC2-204ENST00000401874 POLR3GLQ9BT43 218 aa23.95■■□□□ 1.43
TSC2-204ENST00000401874 FAM50AQ14320 339 aaKnown RBP23.72■■□□□ 1.39
TSC2-204ENST00000401874 GTF3C3Q9Y5Q9 886 aa23.7■■□□□ 1.39
TSC2-204ENST00000401874 MYT1LQ9UL68 1186 aa23.7■■□□□ 1.38
TSC2-204ENST00000401874 CNGB1Q14028 1251 aaPredicted RBP23.66■■□□□ 1.38
TSC2-204ENST00000401874 ZNF316A6NFI3 1004 aaPredicted RBP23.64■■□□□ 1.37
TSC2-204ENST00000401874 RTL5Q5HYW3 569 aaPredicted RBP23.62■■□□□ 1.37
TSC2-204ENST00000401874 ABCC9O60706 1549 aa23.59■■□□□ 1.37
TSC2-204ENST00000401874 NEUROD1Q13562 356 aa23.55■■□□□ 1.36
TSC2-204ENST00000401874 TRIM52Q96A61 297 aa23.54■■□□□ 1.36
TSC2-204ENST00000401874 ANP32CO43423 234 aa23.53■■□□□ 1.36
TSC2-204ENST00000401874 ACIN1Q9UKV3 1341 aaKnown RBP23.5■■□□□ 1.35
TSC2-204ENST00000401874 PABPN1Q86U42 306 aaKnown RBP eCLIP23.47■■□□□ 1.358e-7■■■□□ 18.8
TSC2-204ENST00000401874 DCAF1Q9Y4B6 1507 aa23.46■■□□□ 1.35
TSC2-204ENST00000401874 BCANQ96GW7 911 aa23.43■■□□□ 1.34
TSC2-204ENST00000401874 CLSPNQ9HAW4 1339 aa23.41■■□□□ 1.34
TSC2-204ENST00000401874 CSRNP3Q8WYN3 585 aa23.41■■□□□ 1.34
TSC2-204ENST00000401874 CDK11AQ9UQ88 783 aaPredicted RBP23.38■■□□□ 1.33
TSC2-204ENST00000401874 SLC4A1APQ9BWU0 796 aaKnown RBP23.35■■□□□ 1.33
TSC2-204ENST00000401874 ZCCHC6Q5VYS8 1495 aaKnown RBP23.33■■□□□ 1.33
TSC2-204ENST00000401874 ZNF326Q5BKZ1 582 aaKnown RBP23.19■■□□□ 1.3
TSC2-204ENST00000401874 SCRIBQ14160 1630 aa23.08■■□□□ 1.28
TSC2-204ENST00000401874 P3H3Q8IVL6 736 aa23.03■■□□□ 1.28
TSC2-204ENST00000401874 ANP32AP39687 249 aaKnown RBP22.98■■□□□ 1.27
TSC2-204ENST00000401874 TONSLQ96HA7 1378 aa22.95■■□□□ 1.26
TSC2-204ENST00000401874 CCDC180Q9P1Z9 1646 aa22.94■■□□□ 1.26
TSC2-204ENST00000401874 FKBP8Q14318 412 aa22.92■■□□□ 1.26
TSC2-204ENST00000401874 CANXP27824 592 aaKnown RBP22.91■■□□□ 1.26
TSC2-204ENST00000401874 ZBTB47Q9UFB7 747 aaPredicted RBP22.91■■□□□ 1.26
TSC2-204ENST00000401874 FBLN2P98095 1184 aa22.87■■□□□ 1.25
TSC2-204ENST00000401874 DDX10Q13206 875 aaKnown RBP22.8■■□□□ 1.24
TSC2-204ENST00000401874 ARID3CA6NKF2 412 aa22.79■■□□□ 1.24
TSC2-204ENST00000401874 HNRNPUQ00839 825 aaKnown RBP eCLIP22.79■■□□□ 1.24
TSC2-204ENST00000401874 MYO15BQ96JP2 1530 aa22.78■■□□□ 1.24
TSC2-204ENST00000401874 ZNF777Q9ULD5 760 aaPredicted RBP22.76■■□□□ 1.23
TSC2-204ENST00000401874 NEFMP07197 916 aa22.75■■□□□ 1.23
TSC2-204ENST00000401874 SCAF1Q9H7N4 1312 aaKnown RBP22.75■■□□□ 1.23
TSC2-204ENST00000401874 NPM2Q86SE8 214 aaKnown RBP22.71■■□□□ 1.23
TSC2-204ENST00000401874 CLIP1P30622 1438 aa22.69■■□□□ 1.22
TSC2-204ENST00000401874 EEA1Q15075 1411 aa22.67■■□□□ 1.22
TSC2-204ENST00000401874 MIER1Q8N108 512 aa22.66■■□□□ 1.22
TSC2-204ENST00000401874 FAM9BQ8IZU0 186 aa22.66■■□□□ 1.22
TSC2-204ENST00000401874 GOLGA3Q08378 1498 aa22.59■■□□□ 1.21
TSC2-204ENST00000401874 RSF1Q96T23 1441 aaPredicted RBP22.58■■□□□ 1.21
TSC2-204ENST00000401874 CEP162Q5TB80 1403 aa22.57■■□□□ 1.2
TSC2-204ENST00000401874 CCDC136Q96JN2 1154 aa22.54■■□□□ 1.2
TSC2-204ENST00000401874 TMC1Q8TDI8 760 aa22.52■■□□□ 1.2
TSC2-204ENST00000401874 UPF2Q9HAU5 1272 aaKnown RBP22.51■■□□□ 1.19
TSC2-204ENST00000401874 MTUS2Q5JR59 1369 aa22.51■■□□□ 1.19
TSC2-204ENST00000401874 MRS2Q9HD23 443 aa22.5■■□□□ 1.19
TSC2-204ENST00000401874 CHIC2Q9UKJ5 165 aa22.5■■□□□ 1.19
TSC2-204ENST00000401874 BCL11AQ9H165 835 aa22.48■■□□□ 1.19
TSC2-204ENST00000401874 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.46■■□□□ 1.19
TSC2-204ENST00000401874 SLC24A1O60721 1099 aa22.45■■□□□ 1.18
TSC2-204ENST00000401874 TNIKQ9UKE5 1360 aa22.44■■□□□ 1.18
TSC2-204ENST00000401874 ANP32BQ92688 251 aaKnown RBP22.43■■□□□ 1.18
TSC2-204ENST00000401874 EIF4G2P78344 907 aaKnown RBP eCLIP22.41■■□□□ 1.18
TSC2-204ENST00000401874 HSP90AA1P07900 732 aaKnown RBP22.38■■□□□ 1.17
TSC2-204ENST00000401874 SALL2Q9Y467 1007 aaPredicted RBP22.38■■□□□ 1.17
TSC2-204ENST00000401874 RB1CC1Q8TDY2 1594 aa22.37■■□□□ 1.17
TSC2-204ENST00000401874 WRNQ14191 1432 aaPredicted RBP eCLIP22.36■■□□□ 1.17
TSC2-204ENST00000401874 WDR43Q15061 677 aaKnown RBP eCLIP22.36■■□□□ 1.17
TSC2-204ENST00000401874 CEP164Q9UPV0 1460 aa22.35■■□□□ 1.17
TSC2-204ENST00000401874 TSPY4P0CV99 314 aa22.34■■□□□ 1.17
TSC2-204ENST00000401874 TSPY10P0CW01 314 aa22.34■■□□□ 1.17
TSC2-204ENST00000401874 CHGAP10645 457 aaKnown RBP22.32■■□□□ 1.16
TSC2-204ENST00000401874 NBR1Q14596 966 aa22.32■■□□□ 1.16
TSC2-204ENST00000401874 HIRIP3Q9BW71 556 aaPredicted RBP22.31■■□□□ 1.16
TSC2-204ENST00000401874 IRX6P78412 446 aaPredicted RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms