RNA–Protein interactions for RNA: ENST00000562155.5

KLHDC4-207, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 1,757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-207ENST00000562155 NISCHQ9Y2I1 1504 aa46.51■■■■■ 5.04
KLHDC4-207ENST00000562155 CCDC180Q9P1Z9 1646 aa40.9■■■■■ 4.14
KLHDC4-207ENST00000562155 ABCC9O60706 1549 aa39.22■■■■□ 3.87
KLHDC4-207ENST00000562155 ZCCHC6Q5VYS8 1495 aaKnown RBP38.93■■■■□ 3.82
KLHDC4-207ENST00000562155 DCAF8L2P0C7V8 631 aa38.57■■■■□ 3.77
KLHDC4-207ENST00000562155 DCAF1Q9Y4B6 1507 aa38.5■■■■□ 3.75
KLHDC4-207ENST00000562155 MYO15BQ96JP2 1530 aa38.32■■■■□ 3.72
KLHDC4-207ENST00000562155 NACADO15069 1562 aa38.26■■■■□ 3.71
KLHDC4-207ENST00000562155 RB1CC1Q8TDY2 1594 aa38.08■■■■□ 3.69
KLHDC4-207ENST00000562155 SCRIBQ14160 1630 aa37.44■■■■□ 3.58
KLHDC4-207ENST00000562155 SHROOM4Q9ULL8 1493 aa37.37■■■■□ 3.57
KLHDC4-207ENST00000562155 UNC13AQ9UPW8 1703 aa37.26■■■■□ 3.56
KLHDC4-207ENST00000562155 BICRAQ9NZM4 1560 aa36.92■■■■□ 3.5
KLHDC4-207ENST00000562155 PABPN1Q86U42 306 aaKnown RBP eCLIP36.84■■■■□ 3.49
KLHDC4-207ENST00000562155 CECR2Q9BXF3 1484 aa36.16■■■■□ 3.38
KLHDC4-207ENST00000562155 BAZ1AQ9NRL2 1556 aaPredicted RBP35.97■■■■□ 3.35
KLHDC4-207ENST00000562155 SMARCA4P51532 1647 aa35.89■■■■□ 3.34
KLHDC4-207ENST00000562155 MROH2BQ7Z745 1585 aa35.88■■■■□ 3.33
KLHDC4-207ENST00000562155 EIF4G1Q04637 1599 aaKnown RBP35.87■■■■□ 3.33
KLHDC4-207ENST00000562155 RSF1Q96T23 1441 aaPredicted RBP35.8■■■■□ 3.32
KLHDC4-207ENST00000562155 SUPT5HO00267 1087 aaKnown RBP35.64■■■■□ 3.3
KLHDC4-207ENST00000562155 WIZO95785 1651 aa35.54■■■■□ 3.28
KLHDC4-207ENST00000562155 PEG3Q9GZU2 1588 aa35.51■■■■□ 3.28
KLHDC4-207ENST00000562155 CC2D2AQ9P2K1 1620 aa35.5■■■■□ 3.27
KLHDC4-207ENST00000562155 ATAD2BQ9ULI0 1458 aa35.48■■■■□ 3.27
KLHDC4-207ENST00000562155 SMARCA2P51531 1590 aa35.45■■■■□ 3.27
KLHDC4-207ENST00000562155 NCAPD3P42695 1498 aa35.32■■■■□ 3.24
KLHDC4-207ENST00000562155 DNAJC5BQ9UF47 199 aa35.23■■■■□ 3.23
KLHDC4-207ENST00000562155 BAZ1BQ9UIG0 1483 aaKnown RBP35.22■■■■□ 3.23
KLHDC4-207ENST00000562155 HMGXB3Q12766 1538 aa35.2■■■■□ 3.23
KLHDC4-207ENST00000562155 TOP2AP11388 1531 aaKnown RBP35.18■■■■□ 3.22
KLHDC4-207ENST00000562155 CCDC88BA6NC98 1476 aa34.81■■■■□ 3.16
KLHDC4-207ENST00000562155 CADPSQ9ULU8 1353 aa34.35■■■■□ 3.09
KLHDC4-207ENST00000562155 CFTRP13569 1480 aa34.33■■■■□ 3.09
KLHDC4-207ENST00000562155 NESP48681 1621 aa34.22■■■■□ 3.07
KLHDC4-207ENST00000562155 LAMC3Q9Y6N6 1575 aa34.22■■■■□ 3.07
KLHDC4-207ENST00000562155 PRDM2Q13029 1718 aa34.11■■■■□ 3.05
KLHDC4-207ENST00000562155 PDS5BQ9NTI5 1447 aa33.97■■■■□ 3.03
KLHDC4-207ENST00000562155 FANCD2Q9BXW9 1451 aa33.95■■■■□ 3.02
KLHDC4-207ENST00000562155 ABCC8Q09428 1581 aa33.81■■■■□ 3
KLHDC4-207ENST00000562155 KIF21AQ7Z4S6 1674 aa33.81■■■■□ 3
KLHDC4-207ENST00000562155 CEP164Q9UPV0 1460 aa33.8■■■■□ 3
KLHDC4-207ENST00000562155 CHIC1Q5VXU3 224 aa33.79■■■■□ 3
KLHDC4-207ENST00000562155 WRNQ14191 1432 aaPredicted RBP eCLIP33.72■■■□□ 2.99
KLHDC4-207ENST00000562155 ERCC6Q03468 1493 aa33.72■■■□□ 2.99
KLHDC4-207ENST00000562155 CUX1P39880 1505 aa33.6■■■□□ 2.97
KLHDC4-207ENST00000562155 TRIM41Q8WV44 630 aa33.59■■■□□ 2.97
KLHDC4-207ENST00000562155 SYNJ1O43426 1573 aa33.59■■■□□ 2.97
KLHDC4-207ENST00000562155 MRC2Q9UBG0 1479 aa33.56■■■□□ 2.96
KLHDC4-207ENST00000562155 URB2Q14146 1524 aaKnown RBP33.55■■■□□ 2.96
KLHDC4-207ENST00000562155 TOP2BQ02880 1626 aa33.54■■■□□ 2.96
KLHDC4-207ENST00000562155 DNMBPQ6XZF7 1577 aa33.53■■■□□ 2.96
KLHDC4-207ENST00000562155 BIVM-ERCC5R4GMW8 1640 aa33.51■■■□□ 2.96
KLHDC4-207ENST00000562155 TOPBP1Q92547 1522 aa33.5■■■□□ 2.95
KLHDC4-207ENST00000562155 THOC2Q8NI27 1593 aaKnown RBP33.46■■■□□ 2.95
KLHDC4-207ENST00000562155 WDR62O43379 1518 aa33.41■■■□□ 2.94
KLHDC4-207ENST00000562155 FGD5Q6ZNL6 1462 aa33.34■■■□□ 2.93
KLHDC4-207ENST00000562155 POLA1P09884 1462 aaPredicted RBP33.29■■■□□ 2.92
KLHDC4-207ENST00000562155 SOGA1O94964 1423 aa33.18■■■□□ 2.9
KLHDC4-207ENST00000562155 CUX2O14529 1486 aa33.15■■■□□ 2.9
KLHDC4-207ENST00000562155 RAD54L2Q9Y4B4 1467 aa33.15■■■□□ 2.9
KLHDC4-207ENST00000562155 TARBP1Q13395 1621 aaKnown RBP33.07■■■□□ 2.88
KLHDC4-207ENST00000562155 ABCA10Q8WWZ4 1543 aa33.05■■■□□ 2.88
KLHDC4-207ENST00000562155 IFT140Q96RY7 1462 aa33.05■■■□□ 2.88
KLHDC4-207ENST00000562155 WDR97A6NE52 1622 aa32.99■■■□□ 2.87
KLHDC4-207ENST00000562155 RUSC2Q8N2Y8 1516 aa32.96■■■□□ 2.87
KLHDC4-207ENST00000562155 KIF27Q86VH2 1401 aa32.94■■■□□ 2.86
KLHDC4-207ENST00000562155 FAM9AQ8IZU1 332 aaPredicted RBP32.91■■■□□ 2.86
KLHDC4-207ENST00000562155 EEA1Q15075 1411 aa32.9■■■□□ 2.86
KLHDC4-207ENST00000562155 TDRD9Q8NDG6 1382 aaKnown RBP32.9■■■□□ 2.86
KLHDC4-207ENST00000562155 ZNF608Q9ULD9 1512 aaPredicted RBP32.86■■■□□ 2.85
KLHDC4-207ENST00000562155 ABCA5Q8WWZ7 1642 aa32.82■■■□□ 2.85
KLHDC4-207ENST00000562155 AQRO60306 1485 aaKnown RBP eCLIP32.81■■■□□ 2.841e-8■■■□□ 16.7
KLHDC4-207ENST00000562155 GAPVD1Q14C86 1478 aa32.8■■■□□ 2.84
KLHDC4-207ENST00000562155 CSRNP3Q8WYN3 585 aa32.78■■■□□ 2.84
KLHDC4-207ENST00000562155 EIF4G3O43432 1585 aaKnown RBP32.74■■■□□ 2.83
KLHDC4-207ENST00000562155 IGF1RP08069 1367 aa32.72■■■□□ 2.83
KLHDC4-207ENST00000562155 ERICH3Q5RHP9 1530 aa32.66■■■□□ 2.82
KLHDC4-207ENST00000562155 GRIN2BQ13224 1484 aa32.66■■■□□ 2.82
KLHDC4-207ENST00000562155 PBRM1Q86U86 1689 aa32.65■■■□□ 2.82
KLHDC4-207ENST00000562155 PRXQ9BXM0 1461 aa32.55■■■□□ 2.8
KLHDC4-207ENST00000562155 CARMIL1Q5VZK9 1371 aa32.54■■■□□ 2.8
KLHDC4-207ENST00000562155 CUL7Q14999 1698 aa32.53■■■□□ 2.8
KLHDC4-207ENST00000562155 SNAPC4Q5SXM2 1469 aa32.49■■■□□ 2.79
KLHDC4-207ENST00000562155 KIF21BO75037 1637 aa32.49■■■□□ 2.79
KLHDC4-207ENST00000562155 MAGI1Q96QZ7 1491 aaPredicted RBP32.47■■■□□ 2.79
KLHDC4-207ENST00000562155 FHAD1B1AJZ9 1412 aa32.44■■■□□ 2.78
KLHDC4-207ENST00000562155 ADAMTS12P58397 1594 aa32.44■■■□□ 2.78
KLHDC4-207ENST00000562155 LOC105371045A0A1W2PR82 267 aa32.43■■■□□ 2.78
KLHDC4-207ENST00000562155 RAPGEF2Q9Y4G8 1499 aa32.43■■■□□ 2.78
KLHDC4-207ENST00000562155 EHMT2Q96KQ7 1210 aa32.42■■■□□ 2.78
KLHDC4-207ENST00000562155 GOLGA3Q08378 1498 aa32.38■■■□□ 2.77
KLHDC4-207ENST00000562155 SYNJ2O15056 1496 aa32.34■■■□□ 2.77
KLHDC4-207ENST00000562155 CHMP7Q8WUX9 453 aaPredicted RBP32.29■■■□□ 2.76
KLHDC4-207ENST00000562155 UBTFP17480 764 aaKnown RBP32.27■■■□□ 2.76
KLHDC4-207ENST00000562155 FBLN2P98095 1184 aa32.25■■■□□ 2.75
KLHDC4-207ENST00000562155 GRIN2AQ12879 1464 aa32.24■■■□□ 2.75
KLHDC4-207ENST00000562155 TNIKQ9UKE5 1360 aa32.16■■■□□ 2.74
KLHDC4-207ENST00000562155 CHD1O14646 1710 aa32.16■■■□□ 2.74
KLHDC4-207ENST00000562155 NUP160Q12769 1436 aa32.06■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms