Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC31.6■■■□□ 2.65
SLC44A2Q8IWA5 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
SLC44A2Q8IWA5 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC31.3■■■□□ 2.6
SLC44A2Q8IWA5 AL356512.1-201ENST00000607453 1739 ntBASIC30.84■■■□□ 2.53
SLC44A2Q8IWA5 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC30.8■■■□□ 2.52
SLC44A2Q8IWA5 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.72■■■□□ 2.51
SLC44A2Q8IWA5 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.62■■■□□ 2.49
SLC44A2Q8IWA5 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SLC44A2Q8IWA5 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
SLC44A2Q8IWA5 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.38■■■□□ 2.45
SLC44A2Q8IWA5 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
SLC44A2Q8IWA5 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.18■■■□□ 2.42
SLC44A2Q8IWA5 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.09■■■□□ 2.41
SLC44A2Q8IWA5 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30■■■□□ 2.39
SLC44A2Q8IWA5 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.56■■■□□ 2.32
SLC44A2Q8IWA5 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC29.56■■■□□ 2.32
SLC44A2Q8IWA5 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
SLC44A2Q8IWA5 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.52■■■□□ 2.32
SLC44A2Q8IWA5 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.42■■■□□ 2.3
SLC44A2Q8IWA5 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.38■■■□□ 2.29
SLC44A2Q8IWA5 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC29.25■■■□□ 2.27
SLC44A2Q8IWA5 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC29.25■■■□□ 2.27
SLC44A2Q8IWA5 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.22■■■□□ 2.27
SLC44A2Q8IWA5 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.2■■■□□ 2.27
SLC44A2Q8IWA5 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC29.18■■■□□ 2.26
SLC44A2Q8IWA5 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC29.09■■■□□ 2.25
SLC44A2Q8IWA5 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.07■■■□□ 2.24
SLC44A2Q8IWA5 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.03■■■□□ 2.24
SLC44A2Q8IWA5 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC28.97■■■□□ 2.23
SLC44A2Q8IWA5 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC28.94■■■□□ 2.22
SLC44A2Q8IWA5 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
SLC44A2Q8IWA5 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC28.83■■■□□ 2.21
SLC44A2Q8IWA5 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
SLC44A2Q8IWA5 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
SLC44A2Q8IWA5 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SLC44A2Q8IWA5 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC28.69■■■□□ 2.18
SLC44A2Q8IWA5 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.67■■■□□ 2.18
SLC44A2Q8IWA5 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC28.65■■■□□ 2.18
SLC44A2Q8IWA5 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.64■■■□□ 2.18
SLC44A2Q8IWA5 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC28.56■■■□□ 2.16
SLC44A2Q8IWA5 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.43■■■□□ 2.14
SLC44A2Q8IWA5 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SLC44A2Q8IWA5 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SLC44A2Q8IWA5 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC28.25■■■□□ 2.11
SLC44A2Q8IWA5 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.11
SLC44A2Q8IWA5 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
SLC44A2Q8IWA5 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SLC44A2Q8IWA5 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SLC44A2Q8IWA5 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
SLC44A2Q8IWA5 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
SLC44A2Q8IWA5 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
SLC44A2Q8IWA5 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC28.07■■■□□ 2.08
SLC44A2Q8IWA5 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC28.04■■■□□ 2.08
SLC44A2Q8IWA5 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC28.03■■■□□ 2.08
SLC44A2Q8IWA5 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.08
SLC44A2Q8IWA5 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.01■■■□□ 2.07
SLC44A2Q8IWA5 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC27.97■■■□□ 2.07
SLC44A2Q8IWA5 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC27.94■■■□□ 2.06
SLC44A2Q8IWA5 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC27.93■■■□□ 2.06
SLC44A2Q8IWA5 INO80B-203ENST00000409917 796 ntTSL 2 BASIC27.93■■■□□ 2.06
SLC44A2Q8IWA5 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.9■■■□□ 2.06
SLC44A2Q8IWA5 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC27.82■■■□□ 2.04
SLC44A2Q8IWA5 ILK-212ENST00000532063 1617 ntTSL 2 BASIC27.81■■■□□ 2.04
SLC44A2Q8IWA5 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC27.81■■■□□ 2.04
SLC44A2Q8IWA5 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC27.78■■■□□ 2.04
SLC44A2Q8IWA5 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SLC44A2Q8IWA5 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC27.67■■■□□ 2.02
SLC44A2Q8IWA5 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC27.65■■■□□ 2.02
SLC44A2Q8IWA5 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.64■■■□□ 2.02
SLC44A2Q8IWA5 AC015813.7-201ENST00000623294 581 ntBASIC27.63■■■□□ 2.01
SLC44A2Q8IWA5 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SLC44A2Q8IWA5 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC27.61■■■□□ 2.01
SLC44A2Q8IWA5 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SLC44A2Q8IWA5 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
SLC44A2Q8IWA5 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC27.51■■□□□ 1.99
SLC44A2Q8IWA5 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC27.48■■□□□ 1.99
SLC44A2Q8IWA5 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.42■■□□□ 1.98
SLC44A2Q8IWA5 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SLC44A2Q8IWA5 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
SLC44A2Q8IWA5 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC27.4■■□□□ 1.98
SLC44A2Q8IWA5 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC27.38■■□□□ 1.97
SLC44A2Q8IWA5 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC27.37■■□□□ 1.97
SLC44A2Q8IWA5 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
SLC44A2Q8IWA5 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC27.36■■□□□ 1.97
SLC44A2Q8IWA5 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
SLC44A2Q8IWA5 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
SLC44A2Q8IWA5 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
SLC44A2Q8IWA5 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.29■■□□□ 1.96
SLC44A2Q8IWA5 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
SLC44A2Q8IWA5 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
SLC44A2Q8IWA5 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
SLC44A2Q8IWA5 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
SLC44A2Q8IWA5 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
SLC44A2Q8IWA5 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
SLC44A2Q8IWA5 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SLC44A2Q8IWA5 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
SLC44A2Q8IWA5 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
SLC44A2Q8IWA5 AC006077.2-201ENST00000623591 457 ntBASIC27.11■■□□□ 1.93
SLC44A2Q8IWA5 AC145285.7-201ENST00000614819 1539 ntBASIC27.1■■□□□ 1.93
SLC44A2Q8IWA5 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC27.08■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms