Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC37.61■■■■□ 3.61
NPAS4Q8IUM7 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC37.1■■■■□ 3.53
NPAS4Q8IUM7 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC36.62■■■■□ 3.45
NPAS4Q8IUM7 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC36.52■■■■□ 3.44
NPAS4Q8IUM7 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC36.37■■■■□ 3.41
NPAS4Q8IUM7 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC36.21■■■■□ 3.39
NPAS4Q8IUM7 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.19■■■■□ 3.38
NPAS4Q8IUM7 AL356512.1-201ENST00000607453 1739 ntBASIC35.97■■■■□ 3.35
NPAS4Q8IUM7 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC35.54■■■■□ 3.28
NPAS4Q8IUM7 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC35.37■■■■□ 3.25
NPAS4Q8IUM7 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC35.29■■■■□ 3.24
NPAS4Q8IUM7 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC35.24■■■■□ 3.23
NPAS4Q8IUM7 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.11■■■■□ 3.21
NPAS4Q8IUM7 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC35.09■■■■□ 3.21
NPAS4Q8IUM7 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC35.09■■■■□ 3.21
NPAS4Q8IUM7 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC35■■■■□ 3.19
NPAS4Q8IUM7 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC34.89■■■■□ 3.18
NPAS4Q8IUM7 HES6-203ENST00000409160 1600 ntTSL 2 BASIC34.81■■■■□ 3.16
NPAS4Q8IUM7 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
NPAS4Q8IUM7 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC34.51■■■■□ 3.12
NPAS4Q8IUM7 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC34.48■■■■□ 3.11
NPAS4Q8IUM7 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC34.44■■■■□ 3.1
NPAS4Q8IUM7 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
NPAS4Q8IUM7 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
NPAS4Q8IUM7 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
NPAS4Q8IUM7 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC34.34■■■■□ 3.09
NPAS4Q8IUM7 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC34.32■■■■□ 3.08
NPAS4Q8IUM7 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC34.27■■■■□ 3.08
NPAS4Q8IUM7 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC34.27■■■■□ 3.08
NPAS4Q8IUM7 INO80B-203ENST00000409917 796 ntTSL 2 BASIC34.1■■■■□ 3.05
NPAS4Q8IUM7 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.95■■■■□ 3.03
NPAS4Q8IUM7 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.82■■■■□ 3.01
NPAS4Q8IUM7 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.82■■■■□ 3
NPAS4Q8IUM7 AC006077.2-201ENST00000623591 457 ntBASIC33.7■■■□□ 2.99
NPAS4Q8IUM7 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC33.69■■■□□ 2.98
NPAS4Q8IUM7 ZNRF2P1-201ENST00000441407 443 ntBASIC33.66■■■□□ 2.98
NPAS4Q8IUM7 AC015813.7-201ENST00000623294 581 ntBASIC33.62■■■□□ 2.97
NPAS4Q8IUM7 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC33.58■■■□□ 2.97
NPAS4Q8IUM7 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC33.48■■■□□ 2.95
NPAS4Q8IUM7 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.38■■■□□ 2.93
NPAS4Q8IUM7 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC33.36■■■□□ 2.93
NPAS4Q8IUM7 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC33.32■■■□□ 2.92
NPAS4Q8IUM7 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC33.29■■■□□ 2.92
NPAS4Q8IUM7 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC33.25■■■□□ 2.91
NPAS4Q8IUM7 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC33.25■■■□□ 2.91
NPAS4Q8IUM7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC33.24■■■□□ 2.91
NPAS4Q8IUM7 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC33.18■■■□□ 2.9
NPAS4Q8IUM7 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
NPAS4Q8IUM7 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC33.06■■■□□ 2.88
NPAS4Q8IUM7 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC32.98■■■□□ 2.87
NPAS4Q8IUM7 AP002365.1-201ENST00000603448 772 ntBASIC32.83■■■□□ 2.85
NPAS4Q8IUM7 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
NPAS4Q8IUM7 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
NPAS4Q8IUM7 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC32.66■■■□□ 2.82
NPAS4Q8IUM7 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.66■■■□□ 2.82
NPAS4Q8IUM7 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC32.63■■■□□ 2.81
NPAS4Q8IUM7 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC32.61■■■□□ 2.81
NPAS4Q8IUM7 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC32.6■■■□□ 2.81
NPAS4Q8IUM7 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC32.6■■■□□ 2.81
NPAS4Q8IUM7 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
NPAS4Q8IUM7 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC32.53■■■□□ 2.8
NPAS4Q8IUM7 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
NPAS4Q8IUM7 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC32.52■■■□□ 2.8
NPAS4Q8IUM7 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC32.49■■■□□ 2.79
NPAS4Q8IUM7 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC32.44■■■□□ 2.78
NPAS4Q8IUM7 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC32.44■■■□□ 2.78
NPAS4Q8IUM7 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.42■■■□□ 2.78
NPAS4Q8IUM7 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC32.4■■■□□ 2.78
NPAS4Q8IUM7 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC32.4■■■□□ 2.78
NPAS4Q8IUM7 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC32.39■■■□□ 2.78
NPAS4Q8IUM7 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC32.38■■■□□ 2.77
NPAS4Q8IUM7 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC32.38■■■□□ 2.77
NPAS4Q8IUM7 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.37■■■□□ 2.77
NPAS4Q8IUM7 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
NPAS4Q8IUM7 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC32.35■■■□□ 2.77
NPAS4Q8IUM7 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC32.32■■■□□ 2.76
NPAS4Q8IUM7 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC32.32■■■□□ 2.76
NPAS4Q8IUM7 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.31■■■□□ 2.76
NPAS4Q8IUM7 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC32.27■■■□□ 2.76
NPAS4Q8IUM7 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC32.25■■■□□ 2.75
NPAS4Q8IUM7 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC32.25■■■□□ 2.75
NPAS4Q8IUM7 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC32.23■■■□□ 2.75
NPAS4Q8IUM7 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC32.22■■■□□ 2.75
NPAS4Q8IUM7 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC32.18■■■□□ 2.74
NPAS4Q8IUM7 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
NPAS4Q8IUM7 DYNLL1-208ENST00000550178 581 ntBASIC32.17■■■□□ 2.74
NPAS4Q8IUM7 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.12■■■□□ 2.73
NPAS4Q8IUM7 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
NPAS4Q8IUM7 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC32.12■■■□□ 2.73
NPAS4Q8IUM7 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC32.12■■■□□ 2.73
NPAS4Q8IUM7 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
NPAS4Q8IUM7 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC32.06■■■□□ 2.72
NPAS4Q8IUM7 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
NPAS4Q8IUM7 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
NPAS4Q8IUM7 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
NPAS4Q8IUM7 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
NPAS4Q8IUM7 AL031258.1-201ENST00000623562 325 ntBASIC31.93■■■□□ 2.7
NPAS4Q8IUM7 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
NPAS4Q8IUM7 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC31.92■■■□□ 2.7
NPAS4Q8IUM7 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC31.92■■■□□ 2.7
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms