Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.16■■■■□ 3.38
DENND4AQ7Z401 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.96■■■■□ 3.35
DENND4AQ7Z401 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC35.55■■■■□ 3.28
DENND4AQ7Z401 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.34■■■■□ 3.25
DENND4AQ7Z401 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.02■■■■□ 3.2
DENND4AQ7Z401 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.8■■■■□ 3.16
DENND4AQ7Z401 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
DENND4AQ7Z401 AL356512.1-201ENST00000607453 1739 ntBASIC34.49■■■■□ 3.11
DENND4AQ7Z401 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC34.42■■■■□ 3.1
DENND4AQ7Z401 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC34.39■■■■□ 3.1
DENND4AQ7Z401 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC34.3■■■■□ 3.08
DENND4AQ7Z401 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC34.26■■■■□ 3.07
DENND4AQ7Z401 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC34.16■■■■□ 3.06
DENND4AQ7Z401 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC34.1■■■■□ 3.05
DENND4AQ7Z401 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.91■■■■□ 3.02
DENND4AQ7Z401 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
DENND4AQ7Z401 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.86■■■■□ 3.01
DENND4AQ7Z401 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.78■■■■□ 3
DENND4AQ7Z401 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.71■■■□□ 2.99
DENND4AQ7Z401 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC33.37■■■□□ 2.93
DENND4AQ7Z401 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC33.37■■■□□ 2.93
DENND4AQ7Z401 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC33.29■■■□□ 2.92
DENND4AQ7Z401 HES6-203ENST00000409160 1600 ntTSL 2 BASIC33.28■■■□□ 2.92
DENND4AQ7Z401 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC33.22■■■□□ 2.91
DENND4AQ7Z401 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC33.2■■■□□ 2.9
DENND4AQ7Z401 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.17■■■□□ 2.9
DENND4AQ7Z401 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
DENND4AQ7Z401 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
DENND4AQ7Z401 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC33.05■■■□□ 2.88
DENND4AQ7Z401 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.97■■■□□ 2.87
DENND4AQ7Z401 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.93■■■□□ 2.86
DENND4AQ7Z401 AC006077.2-201ENST00000623591 457 ntBASIC32.86■■■□□ 2.85
DENND4AQ7Z401 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.81■■■□□ 2.84
DENND4AQ7Z401 ZNRF2P1-201ENST00000441407 443 ntBASIC32.8■■■□□ 2.84
DENND4AQ7Z401 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.79■■■□□ 2.84
DENND4AQ7Z401 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC32.67■■■□□ 2.82
DENND4AQ7Z401 AC015813.7-201ENST00000623294 581 ntBASIC32.55■■■□□ 2.8
DENND4AQ7Z401 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
DENND4AQ7Z401 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC32.34■■■□□ 2.77
DENND4AQ7Z401 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.31■■■□□ 2.76
DENND4AQ7Z401 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC32.29■■■□□ 2.76
DENND4AQ7Z401 AP002365.1-201ENST00000603448 772 ntBASIC32.18■■■□□ 2.74
DENND4AQ7Z401 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
DENND4AQ7Z401 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.04■■■□□ 2.72
DENND4AQ7Z401 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
DENND4AQ7Z401 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.91■■■□□ 2.7
DENND4AQ7Z401 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
DENND4AQ7Z401 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.84■■■□□ 2.69
DENND4AQ7Z401 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.84■■■□□ 2.69
DENND4AQ7Z401 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.8■■■□□ 2.68
DENND4AQ7Z401 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
DENND4AQ7Z401 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.77■■■□□ 2.68
DENND4AQ7Z401 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC31.74■■■□□ 2.67
DENND4AQ7Z401 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.7■■■□□ 2.67
DENND4AQ7Z401 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC31.69■■■□□ 2.66
DENND4AQ7Z401 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
DENND4AQ7Z401 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.67■■■□□ 2.66
DENND4AQ7Z401 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
DENND4AQ7Z401 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC31.66■■■□□ 2.66
DENND4AQ7Z401 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
DENND4AQ7Z401 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC31.6■■■□□ 2.65
DENND4AQ7Z401 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC31.56■■■□□ 2.64
DENND4AQ7Z401 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
DENND4AQ7Z401 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
DENND4AQ7Z401 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC31.46■■■□□ 2.63
DENND4AQ7Z401 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
DENND4AQ7Z401 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
DENND4AQ7Z401 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC31.46■■■□□ 2.63
DENND4AQ7Z401 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC31.46■■■□□ 2.63
DENND4AQ7Z401 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
DENND4AQ7Z401 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC31.32■■■□□ 2.6
DENND4AQ7Z401 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.3■■■□□ 2.6
DENND4AQ7Z401 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC31.27■■■□□ 2.6
DENND4AQ7Z401 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC31.26■■■□□ 2.59
DENND4AQ7Z401 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC31.23■■■□□ 2.59
DENND4AQ7Z401 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC31.22■■■□□ 2.59
DENND4AQ7Z401 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
DENND4AQ7Z401 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC31.16■■■□□ 2.58
DENND4AQ7Z401 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC31.16■■■□□ 2.58
DENND4AQ7Z401 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
DENND4AQ7Z401 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
DENND4AQ7Z401 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
DENND4AQ7Z401 DYNLL1-208ENST00000550178 581 ntBASIC31.15■■■□□ 2.58
DENND4AQ7Z401 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC31.14■■■□□ 2.58
DENND4AQ7Z401 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
DENND4AQ7Z401 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
DENND4AQ7Z401 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC31.1■■■□□ 2.57
DENND4AQ7Z401 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.1■■■□□ 2.57
DENND4AQ7Z401 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
DENND4AQ7Z401 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.97■■■□□ 2.55
DENND4AQ7Z401 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.97■■■□□ 2.55
DENND4AQ7Z401 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
DENND4AQ7Z401 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.92■■■□□ 2.54
DENND4AQ7Z401 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC30.91■■■□□ 2.54
DENND4AQ7Z401 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC30.91■■■□□ 2.54
DENND4AQ7Z401 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
DENND4AQ7Z401 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.87■■■□□ 2.53
DENND4AQ7Z401 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC30.87■■■□□ 2.53
DENND4AQ7Z401 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.87■■■□□ 2.53
DENND4AQ7Z401 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC30.86■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms