Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC31.19■■■□□ 2.58
LRRK2Q5S007 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.77■■■□□ 2.52
LRRK2Q5S007 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
LRRK2Q5S007 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
LRRK2Q5S007 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC29.89■■■□□ 2.38
LRRK2Q5S007 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.82■■■□□ 2.36
LRRK2Q5S007 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
LRRK2Q5S007 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.61■■■□□ 2.33
LRRK2Q5S007 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.54■■■□□ 2.32
LRRK2Q5S007 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
LRRK2Q5S007 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
LRRK2Q5S007 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.39■■■□□ 2.3
LRRK2Q5S007 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC29.34■■■□□ 2.29
LRRK2Q5S007 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC29.15■■■□□ 2.26
LRRK2Q5S007 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.11■■■□□ 2.25
LRRK2Q5S007 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
LRRK2Q5S007 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC29.01■■■□□ 2.24
LRRK2Q5S007 AL356512.1-201ENST00000607453 1739 ntBASIC28.81■■■□□ 2.2
LRRK2Q5S007 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
LRRK2Q5S007 AC006077.2-201ENST00000623591 457 ntBASIC28.69■■■□□ 2.18
LRRK2Q5S007 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.64■■■□□ 2.18
LRRK2Q5S007 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.63■■■□□ 2.17
LRRK2Q5S007 ZNRF2P1-201ENST00000441407 443 ntBASIC28.59■■■□□ 2.17
LRRK2Q5S007 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
LRRK2Q5S007 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
LRRK2Q5S007 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
LRRK2Q5S007 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC28.49■■■□□ 2.15
LRRK2Q5S007 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.44■■■□□ 2.14
LRRK2Q5S007 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC28.43■■■□□ 2.14
LRRK2Q5S007 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC28.36■■■□□ 2.13
LRRK2Q5S007 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC28.17■■■□□ 2.1
LRRK2Q5S007 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC28.11■■■□□ 2.09
LRRK2Q5S007 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
LRRK2Q5S007 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC28.03■■■□□ 2.08
LRRK2Q5S007 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC27.88■■■□□ 2.05
LRRK2Q5S007 AP002365.1-201ENST00000603448 772 ntBASIC27.84■■■□□ 2.05
LRRK2Q5S007 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC27.82■■■□□ 2.04
LRRK2Q5S007 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC27.82■■■□□ 2.04
LRRK2Q5S007 AC015813.7-201ENST00000623294 581 ntBASIC27.76■■■□□ 2.03
LRRK2Q5S007 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.73■■■□□ 2.03
LRRK2Q5S007 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
LRRK2Q5S007 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC27.64■■■□□ 2.01
LRRK2Q5S007 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.55■■■□□ 2
LRRK2Q5S007 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC27.55■■■□□ 2
LRRK2Q5S007 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC27.55■■■□□ 2
LRRK2Q5S007 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC27.54■■■□□ 2
LRRK2Q5S007 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
LRRK2Q5S007 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC27.49■■□□□ 1.99
LRRK2Q5S007 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27.36■■□□□ 1.97
LRRK2Q5S007 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC27.35■■□□□ 1.97
LRRK2Q5S007 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
LRRK2Q5S007 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC27.31■■□□□ 1.96
LRRK2Q5S007 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC27.29■■□□□ 1.96
LRRK2Q5S007 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
LRRK2Q5S007 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
LRRK2Q5S007 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
LRRK2Q5S007 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
LRRK2Q5S007 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.2■■□□□ 1.94
LRRK2Q5S007 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC27.16■■□□□ 1.94
LRRK2Q5S007 HES6-203ENST00000409160 1600 ntTSL 2 BASIC27.14■■□□□ 1.94
LRRK2Q5S007 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC27.13■■□□□ 1.93
LRRK2Q5S007 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
LRRK2Q5S007 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
LRRK2Q5S007 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
LRRK2Q5S007 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
LRRK2Q5S007 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
LRRK2Q5S007 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC27.08■■□□□ 1.93
LRRK2Q5S007 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC27.08■■□□□ 1.93
LRRK2Q5S007 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC27.06■■□□□ 1.92
LRRK2Q5S007 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.04■■□□□ 1.92
LRRK2Q5S007 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC27.02■■□□□ 1.92
LRRK2Q5S007 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC27.01■■□□□ 1.92
LRRK2Q5S007 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.99■■□□□ 1.91
LRRK2Q5S007 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC26.98■■□□□ 1.91
LRRK2Q5S007 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
LRRK2Q5S007 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC26.94■■□□□ 1.9
LRRK2Q5S007 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC26.92■■□□□ 1.9
LRRK2Q5S007 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC26.91■■□□□ 1.9
LRRK2Q5S007 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.9■■□□□ 1.9
LRRK2Q5S007 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC26.86■■□□□ 1.89
LRRK2Q5S007 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
LRRK2Q5S007 DYNLL1-208ENST00000550178 581 ntBASIC26.85■■□□□ 1.89
LRRK2Q5S007 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
LRRK2Q5S007 RPS2P35-201ENST00000443417 897 ntBASIC26.82■■□□□ 1.88
LRRK2Q5S007 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
LRRK2Q5S007 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
LRRK2Q5S007 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC26.77■■□□□ 1.88
LRRK2Q5S007 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC26.74■■□□□ 1.87
LRRK2Q5S007 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC26.74■■□□□ 1.87
LRRK2Q5S007 RARRES2P7-201ENST00000567349 469 ntBASIC26.74■■□□□ 1.87
LRRK2Q5S007 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC26.71■■□□□ 1.87
LRRK2Q5S007 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
LRRK2Q5S007 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC26.65■■□□□ 1.86
LRRK2Q5S007 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
LRRK2Q5S007 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
LRRK2Q5S007 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
LRRK2Q5S007 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.59■■□□□ 1.85
LRRK2Q5S007 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.54■■□□□ 1.84
LRRK2Q5S007 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC26.54■■□□□ 1.84
LRRK2Q5S007 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms