Protein–RNA interactions for Protein: Q53RY4

KRTCAP3, Keratinocyte-associated protein 3, humanhuman

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTCAP3Q53RY4 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC31.18■■■□□ 2.58
KRTCAP3Q53RY4 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.72■■■□□ 2.51
KRTCAP3Q53RY4 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
KRTCAP3Q53RY4 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.22■■■□□ 2.43
KRTCAP3Q53RY4 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
KRTCAP3Q53RY4 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
KRTCAP3Q53RY4 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC30.04■■■□□ 2.4
KRTCAP3Q53RY4 AL356512.1-201ENST00000607453 1739 ntBASIC29.85■■■□□ 2.37
KRTCAP3Q53RY4 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.43■■■□□ 2.3
KRTCAP3Q53RY4 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.28■■■□□ 2.28
KRTCAP3Q53RY4 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.19■■■□□ 2.26
KRTCAP3Q53RY4 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.13■■■□□ 2.25
KRTCAP3Q53RY4 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC29.13■■■□□ 2.25
KRTCAP3Q53RY4 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.12■■■□□ 2.25
KRTCAP3Q53RY4 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC28.97■■■□□ 2.23
KRTCAP3Q53RY4 HES6-203ENST00000409160 1600 ntTSL 2 BASIC28.97■■■□□ 2.23
KRTCAP3Q53RY4 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC28.88■■■□□ 2.21
KRTCAP3Q53RY4 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
KRTCAP3Q53RY4 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
KRTCAP3Q53RY4 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC28.66■■■□□ 2.18
KRTCAP3Q53RY4 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.56■■■□□ 2.16
KRTCAP3Q53RY4 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
KRTCAP3Q53RY4 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC28.5■■■□□ 2.15
KRTCAP3Q53RY4 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
KRTCAP3Q53RY4 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
KRTCAP3Q53RY4 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.45■■■□□ 2.14
KRTCAP3Q53RY4 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
KRTCAP3Q53RY4 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.41■■■□□ 2.14
KRTCAP3Q53RY4 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
KRTCAP3Q53RY4 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.19■■■□□ 2.1
KRTCAP3Q53RY4 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC28.05■■■□□ 2.08
KRTCAP3Q53RY4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.02■■■□□ 2.08
KRTCAP3Q53RY4 AC006077.2-201ENST00000623591 457 ntBASIC27.91■■■□□ 2.06
KRTCAP3Q53RY4 AC015813.7-201ENST00000623294 581 ntBASIC27.86■■■□□ 2.05
KRTCAP3Q53RY4 ZNRF2P1-201ENST00000441407 443 ntBASIC27.84■■■□□ 2.05
KRTCAP3Q53RY4 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC27.83■■■□□ 2.05
KRTCAP3Q53RY4 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.83■■■□□ 2.05
KRTCAP3Q53RY4 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC27.83■■■□□ 2.05
KRTCAP3Q53RY4 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC27.74■■■□□ 2.03
KRTCAP3Q53RY4 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC27.73■■■□□ 2.03
KRTCAP3Q53RY4 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
KRTCAP3Q53RY4 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
KRTCAP3Q53RY4 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC27.63■■■□□ 2.01
KRTCAP3Q53RY4 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC27.6■■■□□ 2.01
KRTCAP3Q53RY4 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.59■■■□□ 2.01
KRTCAP3Q53RY4 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
KRTCAP3Q53RY4 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.56■■■□□ 2
KRTCAP3Q53RY4 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
KRTCAP3Q53RY4 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
KRTCAP3Q53RY4 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.31■■□□□ 1.96
KRTCAP3Q53RY4 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
KRTCAP3Q53RY4 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
KRTCAP3Q53RY4 AP002365.1-201ENST00000603448 772 ntBASIC27.12■■□□□ 1.93
KRTCAP3Q53RY4 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
KRTCAP3Q53RY4 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
KRTCAP3Q53RY4 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
KRTCAP3Q53RY4 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC27■■□□□ 1.91
KRTCAP3Q53RY4 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
KRTCAP3Q53RY4 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
KRTCAP3Q53RY4 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.9■■□□□ 1.9
KRTCAP3Q53RY4 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.89■■□□□ 1.9
KRTCAP3Q53RY4 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
KRTCAP3Q53RY4 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
KRTCAP3Q53RY4 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
KRTCAP3Q53RY4 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC26.88■■□□□ 1.89
KRTCAP3Q53RY4 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC26.87■■□□□ 1.89
KRTCAP3Q53RY4 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC26.87■■□□□ 1.89
KRTCAP3Q53RY4 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.85■■□□□ 1.89
KRTCAP3Q53RY4 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
KRTCAP3Q53RY4 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.84■■□□□ 1.89
KRTCAP3Q53RY4 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.83■■□□□ 1.89
KRTCAP3Q53RY4 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
KRTCAP3Q53RY4 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
KRTCAP3Q53RY4 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.78■■□□□ 1.88
KRTCAP3Q53RY4 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
KRTCAP3Q53RY4 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC26.78■■□□□ 1.88
KRTCAP3Q53RY4 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC26.77■■□□□ 1.88
KRTCAP3Q53RY4 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.76■■□□□ 1.87
KRTCAP3Q53RY4 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.76■■□□□ 1.87
KRTCAP3Q53RY4 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
KRTCAP3Q53RY4 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.74■■□□□ 1.87
KRTCAP3Q53RY4 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
KRTCAP3Q53RY4 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
KRTCAP3Q53RY4 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.65■■□□□ 1.86
KRTCAP3Q53RY4 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.65■■□□□ 1.86
KRTCAP3Q53RY4 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
KRTCAP3Q53RY4 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
KRTCAP3Q53RY4 DYNLL1-208ENST00000550178 581 ntBASIC26.59■■□□□ 1.85
KRTCAP3Q53RY4 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.54■■□□□ 1.84
KRTCAP3Q53RY4 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
KRTCAP3Q53RY4 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
KRTCAP3Q53RY4 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.52■■□□□ 1.84
KRTCAP3Q53RY4 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.51■■□□□ 1.83
KRTCAP3Q53RY4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
KRTCAP3Q53RY4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.49■■□□□ 1.83
KRTCAP3Q53RY4 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
KRTCAP3Q53RY4 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
KRTCAP3Q53RY4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.44■■□□□ 1.82
KRTCAP3Q53RY4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
KRTCAP3Q53RY4 AL031258.1-201ENST00000623562 325 ntBASIC26.4■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms