Protein–RNA interactions for Protein: P98164

LRP2, Low-density lipoprotein receptor-related protein 2, humanhuman

Predictions only

Length 4,655 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP2P98164 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC19.73■□□□□ 0.75
LRP2P98164 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.72
LRP2P98164 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
LRP2P98164 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LRP2P98164 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRP2P98164 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRP2P98164 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LRP2P98164 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
LRP2P98164 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC18.77■□□□□ 0.59
LRP2P98164 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
LRP2P98164 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
LRP2P98164 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
LRP2P98164 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC18.58■□□□□ 0.56
LRP2P98164 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
LRP2P98164 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LRP2P98164 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC18.46■□□□□ 0.55
LRP2P98164 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LRP2P98164 ZNRF2P1-201ENST00000441407 443 ntBASIC18.31■□□□□ 0.52
LRP2P98164 AC006077.2-201ENST00000623591 457 ntBASIC18.23■□□□□ 0.51
LRP2P98164 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LRP2P98164 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
LRP2P98164 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRP2P98164 INO80B-203ENST00000409917 796 ntTSL 2 BASIC18.14■□□□□ 0.49
LRP2P98164 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRP2P98164 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRP2P98164 AL356512.1-201ENST00000607453 1739 ntBASIC18.12■□□□□ 0.49
LRP2P98164 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LRP2P98164 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC18.09■□□□□ 0.49
LRP2P98164 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC18.04■□□□□ 0.48
LRP2P98164 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
LRP2P98164 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
LRP2P98164 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
LRP2P98164 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
LRP2P98164 AP002365.1-201ENST00000603448 772 ntBASIC17.76■□□□□ 0.43
LRP2P98164 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC17.71■□□□□ 0.43
LRP2P98164 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRP2P98164 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC17.7■□□□□ 0.42
LRP2P98164 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
LRP2P98164 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC17.69■□□□□ 0.42
LRP2P98164 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LRP2P98164 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
LRP2P98164 AC015813.7-201ENST00000623294 581 ntBASIC17.66■□□□□ 0.42
LRP2P98164 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LRP2P98164 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LRP2P98164 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC17.59■□□□□ 0.41
LRP2P98164 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
LRP2P98164 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC17.51■□□□□ 0.39
LRP2P98164 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC17.5■□□□□ 0.39
LRP2P98164 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LRP2P98164 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LRP2P98164 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC17.43■□□□□ 0.38
LRP2P98164 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
LRP2P98164 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
LRP2P98164 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
LRP2P98164 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC17.36■□□□□ 0.37
LRP2P98164 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
LRP2P98164 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC17.32■□□□□ 0.36
LRP2P98164 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
LRP2P98164 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.3■□□□□ 0.36
LRP2P98164 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
LRP2P98164 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC17.27■□□□□ 0.36
LRP2P98164 HES6-203ENST00000409160 1600 ntTSL 2 BASIC17.26■□□□□ 0.35
LRP2P98164 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC17.25■□□□□ 0.35
LRP2P98164 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC17.23■□□□□ 0.35
LRP2P98164 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC17.22■□□□□ 0.35
LRP2P98164 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
LRP2P98164 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC17.18■□□□□ 0.34
LRP2P98164 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC17.18■□□□□ 0.34
LRP2P98164 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRP2P98164 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
LRP2P98164 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC17.17■□□□□ 0.34
LRP2P98164 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
LRP2P98164 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC17.16■□□□□ 0.34
LRP2P98164 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
LRP2P98164 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC17.14■□□□□ 0.33
LRP2P98164 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
LRP2P98164 RPS2P35-201ENST00000443417 897 ntBASIC17.14■□□□□ 0.33
LRP2P98164 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC17.13■□□□□ 0.33
LRP2P98164 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRP2P98164 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRP2P98164 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC17.1■□□□□ 0.33
LRP2P98164 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRP2P98164 DYNLL1-208ENST00000550178 581 ntBASIC17.09■□□□□ 0.33
LRP2P98164 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
LRP2P98164 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
LRP2P98164 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
LRP2P98164 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC17.05■□□□□ 0.32
LRP2P98164 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
LRP2P98164 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC17.01■□□□□ 0.31
LRP2P98164 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC17.01■□□□□ 0.31
LRP2P98164 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC17.01■□□□□ 0.31
LRP2P98164 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRP2P98164 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
LRP2P98164 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
LRP2P98164 RARRES2P7-201ENST00000567349 469 ntBASIC16.97■□□□□ 0.31
LRP2P98164 AC136428.2-201ENST00000563187 214 ntBASIC16.94■□□□□ 0.3
LRP2P98164 SUZ12P1-203ENST00000578195 985 ntBASIC16.94■□□□□ 0.3
LRP2P98164 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LRP2P98164 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC16.91■□□□□ 0.3
LRP2P98164 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms