Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
CKS1BP61024 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
CKS1BP61024 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CKS1BP61024 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC22.73■■□□□ 1.23
CKS1BP61024 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
CKS1BP61024 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CKS1BP61024 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC22.09■■□□□ 1.13
CKS1BP61024 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
CKS1BP61024 HES6-203ENST00000409160 1600 ntTSL 2 BASIC21.84■■□□□ 1.09
CKS1BP61024 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
CKS1BP61024 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC21.78■■□□□ 1.08
CKS1BP61024 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
CKS1BP61024 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
CKS1BP61024 AL356512.1-201ENST00000607453 1739 ntBASIC21.75■■□□□ 1.07
CKS1BP61024 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
CKS1BP61024 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC21.57■■□□□ 1.04
CKS1BP61024 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CKS1BP61024 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CKS1BP61024 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CKS1BP61024 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC21.4■■□□□ 1.02
CKS1BP61024 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CKS1BP61024 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CKS1BP61024 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
CKS1BP61024 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
CKS1BP61024 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
CKS1BP61024 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC21.15■□□□□ 0.98
CKS1BP61024 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CKS1BP61024 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC21.12■□□□□ 0.97
CKS1BP61024 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
CKS1BP61024 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC21.06■□□□□ 0.96
CKS1BP61024 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
CKS1BP61024 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC21■□□□□ 0.95
CKS1BP61024 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CKS1BP61024 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CKS1BP61024 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
CKS1BP61024 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CKS1BP61024 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CKS1BP61024 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CKS1BP61024 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CKS1BP61024 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CKS1BP61024 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CKS1BP61024 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
CKS1BP61024 AL161658.1-201ENST00000623641 1967 ntBASIC20.67■□□□□ 0.9
CKS1BP61024 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
CKS1BP61024 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CKS1BP61024 SMARCD3-201ENST00000262188 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CKS1BP61024 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CKS1BP61024 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CKS1BP61024 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CKS1BP61024 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CKS1BP61024 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CKS1BP61024 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
CKS1BP61024 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
CKS1BP61024 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
CKS1BP61024 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
CKS1BP61024 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
CKS1BP61024 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC20.41■□□□□ 0.86
CKS1BP61024 AC139426.1-201ENST00000568218 2529 ntBASIC20.37■□□□□ 0.85
CKS1BP61024 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CKS1BP61024 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CKS1BP61024 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CKS1BP61024 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
CKS1BP61024 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
CKS1BP61024 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CKS1BP61024 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
CKS1BP61024 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CKS1BP61024 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CKS1BP61024 ST7-202ENST00000323984 2142 ntTSL 5 BASIC20.22■□□□□ 0.83
CKS1BP61024 ST7-207ENST00000393449 2127 ntTSL 5 BASIC20.22■□□□□ 0.83
CKS1BP61024 ST7-205ENST00000393446 2114 ntTSL 5 BASIC20.21■□□□□ 0.83
CKS1BP61024 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC20.21■□□□□ 0.83
CKS1BP61024 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CKS1BP61024 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CKS1BP61024 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CKS1BP61024 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CKS1BP61024 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CKS1BP61024 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.18■□□□□ 0.82
CKS1BP61024 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CKS1BP61024 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC20.17■□□□□ 0.82
CKS1BP61024 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.16■□□□□ 0.82
CKS1BP61024 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
CKS1BP61024 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
CKS1BP61024 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CKS1BP61024 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
CKS1BP61024 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
CKS1BP61024 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
CKS1BP61024 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.08■□□□□ 0.81
CKS1BP61024 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
CKS1BP61024 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
CKS1BP61024 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
CKS1BP61024 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CKS1BP61024 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CKS1BP61024 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CKS1BP61024 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CKS1BP61024 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CKS1BP61024 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC20■□□□□ 0.79
CKS1BP61024 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.99■□□□□ 0.79
CKS1BP61024 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
CKS1BP61024 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CKS1BP61024 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 13.5 ms