Protein–RNA interactions for Protein: P60468

SEC61B, Protein transport protein Sec61 subunit beta, humanhuman

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61BP60468 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
SEC61BP60468 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC18.28■□□□□ 0.52
SEC61BP60468 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
SEC61BP60468 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
SEC61BP60468 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SEC61BP60468 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SEC61BP60468 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.45
SEC61BP60468 AL356512.1-201ENST00000607453 1739 ntBASIC17.71■□□□□ 0.43
SEC61BP60468 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SEC61BP60468 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SEC61BP60468 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC17.48■□□□□ 0.39
SEC61BP60468 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
SEC61BP60468 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC17.32■□□□□ 0.36
SEC61BP60468 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC17.32■□□□□ 0.36
SEC61BP60468 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
SEC61BP60468 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SEC61BP60468 HES6-203ENST00000409160 1600 ntTSL 2 BASIC17.2■□□□□ 0.34
SEC61BP60468 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SEC61BP60468 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
SEC61BP60468 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SEC61BP60468 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
SEC61BP60468 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC16.96■□□□□ 0.31
SEC61BP60468 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC16.96■□□□□ 0.31
SEC61BP60468 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
SEC61BP60468 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
SEC61BP60468 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC16.94■□□□□ 0.3
SEC61BP60468 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SEC61BP60468 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
SEC61BP60468 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SEC61BP60468 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
SEC61BP60468 INO80B-203ENST00000409917 796 ntTSL 2 BASIC16.72■□□□□ 0.27
SEC61BP60468 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
SEC61BP60468 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SEC61BP60468 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC16.63■□□□□ 0.25
SEC61BP60468 AC006077.2-201ENST00000623591 457 ntBASIC16.61■□□□□ 0.25
SEC61BP60468 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC16.58■□□□□ 0.24
SEC61BP60468 ZNRF2P1-201ENST00000441407 443 ntBASIC16.57■□□□□ 0.24
SEC61BP60468 AC015813.7-201ENST00000623294 581 ntBASIC16.53■□□□□ 0.24
SEC61BP60468 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
SEC61BP60468 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
SEC61BP60468 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SEC61BP60468 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC16.45■□□□□ 0.22
SEC61BP60468 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SEC61BP60468 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SEC61BP60468 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC16.4■□□□□ 0.22
SEC61BP60468 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61BP60468 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
SEC61BP60468 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
SEC61BP60468 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SEC61BP60468 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SEC61BP60468 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC16.25■□□□□ 0.19
SEC61BP60468 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SEC61BP60468 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
SEC61BP60468 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61BP60468 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
SEC61BP60468 AP002365.1-201ENST00000603448 772 ntBASIC16.15■□□□□ 0.18
SEC61BP60468 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SEC61BP60468 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SEC61BP60468 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61BP60468 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
SEC61BP60468 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC16.02■□□□□ 0.16
SEC61BP60468 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC16.02■□□□□ 0.16
SEC61BP60468 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
SEC61BP60468 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC16■□□□□ 0.15
SEC61BP60468 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC15.99■□□□□ 0.15
SEC61BP60468 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
SEC61BP60468 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
SEC61BP60468 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
SEC61BP60468 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
SEC61BP60468 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC15.95■□□□□ 0.14
SEC61BP60468 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
SEC61BP60468 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC15.94■□□□□ 0.14
SEC61BP60468 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC15.94■□□□□ 0.14
SEC61BP60468 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC15.94■□□□□ 0.14
SEC61BP60468 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC15.93■□□□□ 0.14
SEC61BP60468 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
SEC61BP60468 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC15.91■□□□□ 0.14
SEC61BP60468 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
SEC61BP60468 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC15.9■□□□□ 0.14
SEC61BP60468 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
SEC61BP60468 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
SEC61BP60468 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
SEC61BP60468 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
SEC61BP60468 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC15.88■□□□□ 0.13
SEC61BP60468 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC15.87■□□□□ 0.13
SEC61BP60468 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC15.87■□□□□ 0.13
SEC61BP60468 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
SEC61BP60468 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SEC61BP60468 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC15.84■□□□□ 0.13
SEC61BP60468 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SEC61BP60468 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC15.82■□□□□ 0.12
SEC61BP60468 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SEC61BP60468 DYNLL1-208ENST00000550178 581 ntBASIC15.79■□□□□ 0.12
SEC61BP60468 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SEC61BP60468 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
SEC61BP60468 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
SEC61BP60468 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
SEC61BP60468 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC15.75■□□□□ 0.11
SEC61BP60468 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
SEC61BP60468 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms