Protein–RNA interactions for Protein: P00414

MT-CO3, Cytochrome c oxidase subunit 3, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO3P00414 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.29■■■□□ 2.92
MT-CO3P00414 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC33.01■■■□□ 2.87
MT-CO3P00414 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC32.55■■■□□ 2.8
MT-CO3P00414 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.44■■■□□ 2.78
MT-CO3P00414 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
MT-CO3P00414 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.98■■■□□ 2.71
MT-CO3P00414 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
MT-CO3P00414 AL356512.1-201ENST00000607453 1739 ntBASIC31.7■■■□□ 2.67
MT-CO3P00414 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
MT-CO3P00414 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC31.49■■■□□ 2.63
MT-CO3P00414 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.37■■■□□ 2.61
MT-CO3P00414 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC31.3■■■□□ 2.6
MT-CO3P00414 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.3■■■□□ 2.6
MT-CO3P00414 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.28■■■□□ 2.6
MT-CO3P00414 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC31.03■■■□□ 2.56
MT-CO3P00414 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.96■■■□□ 2.55
MT-CO3P00414 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
MT-CO3P00414 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC30.93■■■□□ 2.54
MT-CO3P00414 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
MT-CO3P00414 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
MT-CO3P00414 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
MT-CO3P00414 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC30.58■■■□□ 2.49
MT-CO3P00414 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC30.57■■■□□ 2.48
MT-CO3P00414 HES6-203ENST00000409160 1600 ntTSL 2 BASIC30.51■■■□□ 2.48
MT-CO3P00414 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
MT-CO3P00414 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.46■■■□□ 2.47
MT-CO3P00414 INO80B-203ENST00000409917 796 ntTSL 2 BASIC30.37■■■□□ 2.45
MT-CO3P00414 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
MT-CO3P00414 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
MT-CO3P00414 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC30.28■■■□□ 2.44
MT-CO3P00414 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC30.28■■■□□ 2.44
MT-CO3P00414 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC30.17■■■□□ 2.42
MT-CO3P00414 ZNRF2P1-201ENST00000441407 443 ntBASIC30.07■■■□□ 2.4
MT-CO3P00414 AC006077.2-201ENST00000623591 457 ntBASIC30.07■■■□□ 2.4
MT-CO3P00414 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC30.02■■■□□ 2.4
MT-CO3P00414 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC29.91■■■□□ 2.38
MT-CO3P00414 AC015813.7-201ENST00000623294 581 ntBASIC29.9■■■□□ 2.38
MT-CO3P00414 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
MT-CO3P00414 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC29.77■■■□□ 2.36
MT-CO3P00414 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC29.76■■■□□ 2.35
MT-CO3P00414 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.61■■■□□ 2.33
MT-CO3P00414 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
MT-CO3P00414 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
MT-CO3P00414 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.42■■■□□ 2.3
MT-CO3P00414 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC29.4■■■□□ 2.3
MT-CO3P00414 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC29.35■■■□□ 2.29
MT-CO3P00414 AP002365.1-201ENST00000603448 772 ntBASIC29.31■■■□□ 2.28
MT-CO3P00414 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.25■■■□□ 2.27
MT-CO3P00414 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC29.16■■■□□ 2.26
MT-CO3P00414 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
MT-CO3P00414 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC29.1■■■□□ 2.25
MT-CO3P00414 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC29.1■■■□□ 2.25
MT-CO3P00414 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC29.09■■■□□ 2.25
MT-CO3P00414 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC29.08■■■□□ 2.25
MT-CO3P00414 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC29.08■■■□□ 2.25
MT-CO3P00414 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC29.07■■■□□ 2.24
MT-CO3P00414 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.06■■■□□ 2.24
MT-CO3P00414 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.04■■■□□ 2.24
MT-CO3P00414 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC29.02■■■□□ 2.24
MT-CO3P00414 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.01■■■□□ 2.24
MT-CO3P00414 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC29.01■■■□□ 2.23
MT-CO3P00414 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC28.94■■■□□ 2.22
MT-CO3P00414 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC28.93■■■□□ 2.22
MT-CO3P00414 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC28.92■■■□□ 2.22
MT-CO3P00414 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
MT-CO3P00414 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC28.82■■■□□ 2.2
MT-CO3P00414 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
MT-CO3P00414 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC28.81■■■□□ 2.2
MT-CO3P00414 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC28.79■■■□□ 2.2
MT-CO3P00414 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
MT-CO3P00414 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC28.74■■■□□ 2.19
MT-CO3P00414 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
MT-CO3P00414 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
MT-CO3P00414 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC28.71■■■□□ 2.19
MT-CO3P00414 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
MT-CO3P00414 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC28.65■■■□□ 2.18
MT-CO3P00414 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.17
MT-CO3P00414 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
MT-CO3P00414 DYNLL1-208ENST00000550178 581 ntBASIC28.63■■■□□ 2.17
MT-CO3P00414 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC28.63■■■□□ 2.17
MT-CO3P00414 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC28.62■■■□□ 2.17
MT-CO3P00414 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
MT-CO3P00414 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
MT-CO3P00414 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
MT-CO3P00414 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC28.51■■■□□ 2.15
MT-CO3P00414 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC28.49■■■□□ 2.15
MT-CO3P00414 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC28.48■■■□□ 2.15
MT-CO3P00414 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
MT-CO3P00414 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC28.44■■■□□ 2.14
MT-CO3P00414 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC28.42■■■□□ 2.14
MT-CO3P00414 AL031258.1-201ENST00000623562 325 ntBASIC28.41■■■□□ 2.14
MT-CO3P00414 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC28.37■■■□□ 2.13
MT-CO3P00414 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
MT-CO3P00414 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
MT-CO3P00414 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
MT-CO3P00414 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
MT-CO3P00414 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
MT-CO3P00414 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC28.29■■■□□ 2.12
MT-CO3P00414 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC28.29■■■□□ 2.12
MT-CO3P00414 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC28.27■■■□□ 2.12
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms