Protein–RNA interactions for Protein: O95704

APBB3, Amyloid-beta A4 precursor protein-binding family B member 3, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3O95704 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC34.91■■■■□ 3.18
APBB3O95704 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.61■■■■□ 3.13
APBB3O95704 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.09■■■■□ 3.05
APBB3O95704 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.03■■■■□ 3.04
APBB3O95704 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC33.77■■■■□ 3
APBB3O95704 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC33.56■■■□□ 2.96
APBB3O95704 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.45■■■□□ 2.95
APBB3O95704 AL356512.1-201ENST00000607453 1739 ntBASIC33.29■■■□□ 2.92
APBB3O95704 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.15■■■□□ 2.9
APBB3O95704 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.02■■■□□ 2.88
APBB3O95704 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.83■■■□□ 2.85
APBB3O95704 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.82■■■□□ 2.84
APBB3O95704 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC32.82■■■□□ 2.84
APBB3O95704 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
APBB3O95704 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC32.58■■■□□ 2.81
APBB3O95704 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC32.52■■■□□ 2.8
APBB3O95704 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC32.44■■■□□ 2.78
APBB3O95704 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
APBB3O95704 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
APBB3O95704 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.11■■■□□ 2.73
APBB3O95704 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
APBB3O95704 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
APBB3O95704 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.04■■■□□ 2.72
APBB3O95704 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.03■■■□□ 2.72
APBB3O95704 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC31.95■■■□□ 2.71
APBB3O95704 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
APBB3O95704 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC31.83■■■□□ 2.69
APBB3O95704 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
APBB3O95704 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.79■■■□□ 2.68
APBB3O95704 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
APBB3O95704 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC31.72■■■□□ 2.67
APBB3O95704 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
APBB3O95704 AC006077.2-201ENST00000623591 457 ntBASIC31.49■■■□□ 2.63
APBB3O95704 ZNRF2P1-201ENST00000441407 443 ntBASIC31.48■■■□□ 2.63
APBB3O95704 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.45■■■□□ 2.63
APBB3O95704 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
APBB3O95704 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.35■■■□□ 2.61
APBB3O95704 AC015813.7-201ENST00000623294 581 ntBASIC31.31■■■□□ 2.6
APBB3O95704 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
APBB3O95704 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.12■■■□□ 2.57
APBB3O95704 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.06■■■□□ 2.56
APBB3O95704 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC31.06■■■□□ 2.56
APBB3O95704 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
APBB3O95704 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
APBB3O95704 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
APBB3O95704 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.81■■■□□ 2.52
APBB3O95704 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
APBB3O95704 AP002365.1-201ENST00000603448 772 ntBASIC30.69■■■□□ 2.5
APBB3O95704 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC30.68■■■□□ 2.5
APBB3O95704 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
APBB3O95704 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
APBB3O95704 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
APBB3O95704 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.45■■■□□ 2.47
APBB3O95704 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.45■■■□□ 2.47
APBB3O95704 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC30.45■■■□□ 2.47
APBB3O95704 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
APBB3O95704 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.44■■■□□ 2.46
APBB3O95704 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
APBB3O95704 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC30.41■■■□□ 2.46
APBB3O95704 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
APBB3O95704 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.34■■■□□ 2.45
APBB3O95704 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.33■■■□□ 2.45
APBB3O95704 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.3■■■□□ 2.44
APBB3O95704 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.3■■■□□ 2.44
APBB3O95704 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.29■■■□□ 2.44
APBB3O95704 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
APBB3O95704 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
APBB3O95704 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.19■■■□□ 2.42
APBB3O95704 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.18■■■□□ 2.42
APBB3O95704 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
APBB3O95704 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
APBB3O95704 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.12■■■□□ 2.41
APBB3O95704 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.07■■■□□ 2.4
APBB3O95704 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.06■■■□□ 2.4
APBB3O95704 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.05■■■□□ 2.4
APBB3O95704 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
APBB3O95704 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
APBB3O95704 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.04■■■□□ 2.4
APBB3O95704 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.02■■■□□ 2.4
APBB3O95704 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30■■■□□ 2.39
APBB3O95704 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
APBB3O95704 DYNLL1-208ENST00000550178 581 ntBASIC30■■■□□ 2.39
APBB3O95704 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
APBB3O95704 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC29.93■■■□□ 2.38
APBB3O95704 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC29.93■■■□□ 2.38
APBB3O95704 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC29.88■■■□□ 2.37
APBB3O95704 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.88■■■□□ 2.37
APBB3O95704 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.87■■■□□ 2.37
APBB3O95704 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC29.87■■■□□ 2.37
APBB3O95704 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.85■■■□□ 2.37
APBB3O95704 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC29.82■■■□□ 2.36
APBB3O95704 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
APBB3O95704 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC29.78■■■□□ 2.36
APBB3O95704 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
APBB3O95704 AL031258.1-201ENST00000623562 325 ntBASIC29.75■■■□□ 2.35
APBB3O95704 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
APBB3O95704 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC29.74■■■□□ 2.35
APBB3O95704 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC29.7■■■□□ 2.34
APBB3O95704 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC29.67■■■□□ 2.34
APBB3O95704 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms