Protein–RNA interactions for Protein: O15020

SPTBN2, Spectrin beta chain, non-erythrocytic 2, humanhuman

Predictions only

Length 2,390 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2O15020 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.04■■■■□ 3.04
SPTBN2O15020 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.69■■■□□ 2.98
SPTBN2O15020 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC33.29■■■□□ 2.92
SPTBN2O15020 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC32.79■■■□□ 2.84
SPTBN2O15020 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
SPTBN2O15020 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
SPTBN2O15020 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
SPTBN2O15020 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.37■■■□□ 2.77
SPTBN2O15020 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC32.36■■■□□ 2.77
SPTBN2O15020 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
SPTBN2O15020 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.17■■■□□ 2.74
SPTBN2O15020 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
SPTBN2O15020 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC32.07■■■□□ 2.72
SPTBN2O15020 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SPTBN2O15020 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC31.8■■■□□ 2.68
SPTBN2O15020 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SPTBN2O15020 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC31.71■■■□□ 2.67
SPTBN2O15020 AL356512.1-201ENST00000607453 1739 ntBASIC31.4■■■□□ 2.62
SPTBN2O15020 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC31.36■■■□□ 2.61
SPTBN2O15020 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC31.35■■■□□ 2.61
SPTBN2O15020 ZNRF2P1-201ENST00000441407 443 ntBASIC31.32■■■□□ 2.61
SPTBN2O15020 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
SPTBN2O15020 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC31.31■■■□□ 2.6
SPTBN2O15020 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.3■■■□□ 2.6
SPTBN2O15020 AC006077.2-201ENST00000623591 457 ntBASIC31.3■■■□□ 2.6
SPTBN2O15020 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.29■■■□□ 2.6
SPTBN2O15020 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
SPTBN2O15020 INO80B-203ENST00000409917 796 ntTSL 2 BASIC31.18■■■□□ 2.58
SPTBN2O15020 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC31.1■■■□□ 2.57
SPTBN2O15020 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC31.01■■■□□ 2.56
SPTBN2O15020 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
SPTBN2O15020 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC30.73■■■□□ 2.51
SPTBN2O15020 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC30.73■■■□□ 2.51
SPTBN2O15020 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC30.61■■■□□ 2.49
SPTBN2O15020 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
SPTBN2O15020 AP002365.1-201ENST00000603448 772 ntBASIC30.54■■■□□ 2.48
SPTBN2O15020 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC30.54■■■□□ 2.48
SPTBN2O15020 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.47■■■□□ 2.47
SPTBN2O15020 AC015813.7-201ENST00000623294 581 ntBASIC30.4■■■□□ 2.46
SPTBN2O15020 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.4■■■□□ 2.46
SPTBN2O15020 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
SPTBN2O15020 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.29■■■□□ 2.44
SPTBN2O15020 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC30.28■■■□□ 2.44
SPTBN2O15020 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC30.28■■■□□ 2.44
SPTBN2O15020 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.22■■■□□ 2.43
SPTBN2O15020 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.42
SPTBN2O15020 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.13■■■□□ 2.41
SPTBN2O15020 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
SPTBN2O15020 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.07■■■□□ 2.4
SPTBN2O15020 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.01■■■□□ 2.39
SPTBN2O15020 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC30.01■■■□□ 2.39
SPTBN2O15020 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC29.96■■■□□ 2.39
SPTBN2O15020 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC29.93■■■□□ 2.38
SPTBN2O15020 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC29.84■■■□□ 2.37
SPTBN2O15020 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
SPTBN2O15020 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC29.81■■■□□ 2.36
SPTBN2O15020 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
SPTBN2O15020 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SPTBN2O15020 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
SPTBN2O15020 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
SPTBN2O15020 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC29.71■■■□□ 2.35
SPTBN2O15020 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
SPTBN2O15020 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC29.69■■■□□ 2.34
SPTBN2O15020 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC29.66■■■□□ 2.34
SPTBN2O15020 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
SPTBN2O15020 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC29.63■■■□□ 2.33
SPTBN2O15020 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC29.62■■■□□ 2.33
SPTBN2O15020 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
SPTBN2O15020 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC29.59■■■□□ 2.33
SPTBN2O15020 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC29.59■■■□□ 2.33
SPTBN2O15020 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC29.57■■■□□ 2.32
SPTBN2O15020 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC29.56■■■□□ 2.32
SPTBN2O15020 RPS2P35-201ENST00000443417 897 ntBASIC29.56■■■□□ 2.32
SPTBN2O15020 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
SPTBN2O15020 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC29.54■■■□□ 2.32
SPTBN2O15020 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC29.49■■■□□ 2.31
SPTBN2O15020 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SPTBN2O15020 DYNLL1-208ENST00000550178 581 ntBASIC29.47■■■□□ 2.31
SPTBN2O15020 ADNP-AS1-201ENST00000558899 927 ntTSL 3 BASIC29.45■■■□□ 2.31
SPTBN2O15020 LFNG-203ENST00000359574 1377 ntAPPRIS ALT1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SPTBN2O15020 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC29.42■■■□□ 2.3
SPTBN2O15020 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC29.42■■■□□ 2.3
SPTBN2O15020 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC29.41■■■□□ 2.3
SPTBN2O15020 HES6-203ENST00000409160 1600 ntTSL 2 BASIC29.41■■■□□ 2.3
SPTBN2O15020 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC29.4■■■□□ 2.3
SPTBN2O15020 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC29.36■■■□□ 2.29
SPTBN2O15020 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC29.34■■■□□ 2.29
SPTBN2O15020 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC29.31■■■□□ 2.28
SPTBN2O15020 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC29.31■■■□□ 2.28
SPTBN2O15020 AL360182.2-201ENST00000451656 470 ntTSL 3 BASIC29.25■■■□□ 2.27
SPTBN2O15020 RARRES2P7-201ENST00000567349 469 ntBASIC29.25■■■□□ 2.27
SPTBN2O15020 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC29.21■■■□□ 2.27
SPTBN2O15020 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC29.17■■■□□ 2.26
SPTBN2O15020 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC29.16■■■□□ 2.26
SPTBN2O15020 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
SPTBN2O15020 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SPTBN2O15020 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
SPTBN2O15020 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC29.06■■■□□ 2.24
SPTBN2O15020 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC29.06■■■□□ 2.24
SPTBN2O15020 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC29.06■■■□□ 2.24
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms