Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
CCL21O00585 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.54■■■□□ 2.48
CCL21O00585 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.13■■■□□ 2.41
CCL21O00585 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
CCL21O00585 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
CCL21O00585 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC29.64■■■□□ 2.33
CCL21O00585 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
CCL21O00585 AL356512.1-201ENST00000607453 1739 ntBASIC29.39■■■□□ 2.3
CCL21O00585 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.3■■■□□ 2.28
CCL21O00585 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.19■■■□□ 2.26
CCL21O00585 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.06■■■□□ 2.24
CCL21O00585 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC28.98■■■□□ 2.23
CCL21O00585 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC28.98■■■□□ 2.23
CCL21O00585 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC28.97■■■□□ 2.23
CCL21O00585 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC28.78■■■□□ 2.2
CCL21O00585 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC28.72■■■□□ 2.19
CCL21O00585 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
CCL21O00585 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
CCL21O00585 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
CCL21O00585 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
CCL21O00585 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
CCL21O00585 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.37■■■□□ 2.13
CCL21O00585 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.34■■■□□ 2.13
CCL21O00585 HES6-203ENST00000409160 1600 ntTSL 2 BASIC28.29■■■□□ 2.12
CCL21O00585 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
CCL21O00585 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
CCL21O00585 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.12■■■□□ 2.09
CCL21O00585 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
CCL21O00585 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC28.06■■■□□ 2.08
CCL21O00585 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.06■■■□□ 2.08
CCL21O00585 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC28■■■□□ 2.07
CCL21O00585 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC27.99■■■□□ 2.07
CCL21O00585 AC006077.2-201ENST00000623591 457 ntBASIC27.83■■■□□ 2.05
CCL21O00585 ZNRF2P1-201ENST00000441407 443 ntBASIC27.82■■■□□ 2.04
CCL21O00585 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.8■■■□□ 2.04
CCL21O00585 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC27.74■■■□□ 2.03
CCL21O00585 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.69■■■□□ 2.02
CCL21O00585 AC015813.7-201ENST00000623294 581 ntBASIC27.67■■■□□ 2.02
CCL21O00585 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
CCL21O00585 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC27.58■■■□□ 2.01
CCL21O00585 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC27.45■■□□□ 1.98
CCL21O00585 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
CCL21O00585 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CCL21O00585 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCL21O00585 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CCL21O00585 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
CCL21O00585 AP002365.1-201ENST00000603448 772 ntBASIC27.14■■□□□ 1.94
CCL21O00585 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.12■■□□□ 1.93
CCL21O00585 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
CCL21O00585 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
CCL21O00585 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC26.96■■□□□ 1.91
CCL21O00585 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC26.96■■□□□ 1.91
CCL21O00585 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
CCL21O00585 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC26.94■■□□□ 1.9
CCL21O00585 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.92■■□□□ 1.9
CCL21O00585 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.91■■□□□ 1.9
CCL21O00585 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.91■■□□□ 1.9
CCL21O00585 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.9■■□□□ 1.9
CCL21O00585 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.89■■□□□ 1.9
CCL21O00585 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.89■■□□□ 1.9
CCL21O00585 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.85■■□□□ 1.89
CCL21O00585 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.8■■□□□ 1.88
CCL21O00585 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.79■■□□□ 1.88
CCL21O00585 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
CCL21O00585 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.74■■□□□ 1.87
CCL21O00585 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.71■■□□□ 1.87
CCL21O00585 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
CCL21O00585 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.69■■□□□ 1.86
CCL21O00585 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCL21O00585 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.65■■□□□ 1.86
CCL21O00585 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
CCL21O00585 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CCL21O00585 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.61■■□□□ 1.85
CCL21O00585 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.6■■□□□ 1.85
CCL21O00585 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC26.56■■□□□ 1.84
CCL21O00585 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.55■■□□□ 1.84
CCL21O00585 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CCL21O00585 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.52■■□□□ 1.84
CCL21O00585 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.51■■□□□ 1.83
CCL21O00585 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
CCL21O00585 DYNLL1-208ENST00000550178 581 ntBASIC26.51■■□□□ 1.83
CCL21O00585 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CCL21O00585 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
CCL21O00585 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
CCL21O00585 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC26.41■■□□□ 1.82
CCL21O00585 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.39■■□□□ 1.82
CCL21O00585 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.38■■□□□ 1.81
CCL21O00585 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.35■■□□□ 1.81
CCL21O00585 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CCL21O00585 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.35■■□□□ 1.81
CCL21O00585 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC26.31■■□□□ 1.8
CCL21O00585 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CCL21O00585 AL031258.1-201ENST00000623562 325 ntBASIC26.28■■□□□ 1.8
CCL21O00585 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
CCL21O00585 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC26.24■■□□□ 1.79
CCL21O00585 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
CCL21O00585 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
CCL21O00585 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
CCL21O00585 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.22■■□□□ 1.79
CCL21O00585 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC26.2■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms