Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
NDUFA4O00483 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
NDUFA4O00483 AL356512.1-201ENST00000607453 1739 ntBASIC25.51■■□□□ 1.68
NDUFA4O00483 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC25.45■■□□□ 1.66
NDUFA4O00483 HES6-203ENST00000409160 1600 ntTSL 2 BASIC25.29■■□□□ 1.64
NDUFA4O00483 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
NDUFA4O00483 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
NDUFA4O00483 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC25.02■■□□□ 1.6
NDUFA4O00483 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC25■■□□□ 1.59
NDUFA4O00483 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC24.88■■□□□ 1.57
NDUFA4O00483 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC24.81■■□□□ 1.56
NDUFA4O00483 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC24.81■■□□□ 1.56
NDUFA4O00483 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC24.45■■□□□ 1.5
NDUFA4O00483 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
NDUFA4O00483 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC24.33■■□□□ 1.49
NDUFA4O00483 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC24.29■■□□□ 1.48
NDUFA4O00483 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
NDUFA4O00483 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
NDUFA4O00483 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC24.08■■□□□ 1.45
NDUFA4O00483 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC23.98■■□□□ 1.43
NDUFA4O00483 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC23.97■■□□□ 1.43
NDUFA4O00483 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
NDUFA4O00483 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
NDUFA4O00483 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC23.92■■□□□ 1.42
NDUFA4O00483 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC23.91■■□□□ 1.42
NDUFA4O00483 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
NDUFA4O00483 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
NDUFA4O00483 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC23.75■■□□□ 1.39
NDUFA4O00483 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
NDUFA4O00483 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
NDUFA4O00483 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
NDUFA4O00483 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC23.59■■□□□ 1.37
NDUFA4O00483 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC23.45■■□□□ 1.35
NDUFA4O00483 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
NDUFA4O00483 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
NDUFA4O00483 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC23.41■■□□□ 1.34
NDUFA4O00483 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NDUFA4O00483 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
NDUFA4O00483 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC23.3■■□□□ 1.32
NDUFA4O00483 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
NDUFA4O00483 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NDUFA4O00483 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
NDUFA4O00483 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
NDUFA4O00483 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
NDUFA4O00483 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
NDUFA4O00483 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
NDUFA4O00483 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
NDUFA4O00483 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC23.04■■□□□ 1.28
NDUFA4O00483 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
NDUFA4O00483 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
NDUFA4O00483 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC23.03■■□□□ 1.28
NDUFA4O00483 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
NDUFA4O00483 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC22.99■■□□□ 1.27
NDUFA4O00483 ILK-212ENST00000532063 1617 ntTSL 2 BASIC22.98■■□□□ 1.27
NDUFA4O00483 INO80B-203ENST00000409917 796 ntTSL 2 BASIC22.93■■□□□ 1.26
NDUFA4O00483 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC22.93■■□□□ 1.26
NDUFA4O00483 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
NDUFA4O00483 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC22.84■■□□□ 1.25
NDUFA4O00483 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
NDUFA4O00483 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC22.78■■□□□ 1.24
NDUFA4O00483 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
NDUFA4O00483 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
NDUFA4O00483 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC22.75■■□□□ 1.23
NDUFA4O00483 AC015813.7-201ENST00000623294 581 ntBASIC22.75■■□□□ 1.23
NDUFA4O00483 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
NDUFA4O00483 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC22.7■■□□□ 1.22
NDUFA4O00483 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NDUFA4O00483 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
NDUFA4O00483 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
NDUFA4O00483 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
NDUFA4O00483 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
NDUFA4O00483 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
NDUFA4O00483 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC22.6■■□□□ 1.21
NDUFA4O00483 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
NDUFA4O00483 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC22.55■■□□□ 1.2
NDUFA4O00483 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
NDUFA4O00483 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
NDUFA4O00483 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
NDUFA4O00483 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
NDUFA4O00483 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC22.44■■□□□ 1.18
NDUFA4O00483 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
NDUFA4O00483 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
NDUFA4O00483 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
NDUFA4O00483 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
NDUFA4O00483 AC145285.7-201ENST00000614819 1539 ntBASIC22.36■■□□□ 1.17
NDUFA4O00483 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
NDUFA4O00483 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
NDUFA4O00483 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
NDUFA4O00483 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
NDUFA4O00483 AC006077.2-201ENST00000623591 457 ntBASIC22.31■■□□□ 1.16
NDUFA4O00483 FAM19A5-203ENST00000402357 1508 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
NDUFA4O00483 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
NDUFA4O00483 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
NDUFA4O00483 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
NDUFA4O00483 RAB43-207ENST00000476465 1627 ntTSL 3 BASIC22.24■■□□□ 1.15
NDUFA4O00483 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC22.19■■□□□ 1.14
NDUFA4O00483 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
NDUFA4O00483 ZNRF2P1-201ENST00000441407 443 ntBASIC22.16■■□□□ 1.14
NDUFA4O00483 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
NDUFA4O00483 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms