Protein–RNA interactions for Protein: A6NL88

SHISA7, Protein shisa-7, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA7A6NL88 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC35.54■■■■□ 3.28
SHISA7A6NL88 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC35.21■■■■□ 3.23
SHISA7A6NL88 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC34.74■■■■□ 3.15
SHISA7A6NL88 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
SHISA7A6NL88 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC34.32■■■■□ 3.08
SHISA7A6NL88 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC34.11■■■■□ 3.05
SHISA7A6NL88 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC33.94■■■■□ 3.02
SHISA7A6NL88 AL356512.1-201ENST00000607453 1739 ntBASIC33.84■■■■□ 3.01
SHISA7A6NL88 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.71■■■□□ 2.99
SHISA7A6NL88 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC33.49■■■□□ 2.95
SHISA7A6NL88 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.45■■■□□ 2.95
SHISA7A6NL88 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC33.43■■■□□ 2.94
SHISA7A6NL88 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.41■■■□□ 2.94
SHISA7A6NL88 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC33.36■■■□□ 2.93
SHISA7A6NL88 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
SHISA7A6NL88 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
SHISA7A6NL88 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC33.04■■■□□ 2.88
SHISA7A6NL88 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.02■■■□□ 2.88
SHISA7A6NL88 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC33.01■■■□□ 2.87
SHISA7A6NL88 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
SHISA7A6NL88 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
SHISA7A6NL88 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC32.58■■■□□ 2.81
SHISA7A6NL88 HES6-203ENST00000409160 1600 ntTSL 2 BASIC32.55■■■□□ 2.8
SHISA7A6NL88 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.53■■■□□ 2.8
SHISA7A6NL88 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.47■■■□□ 2.79
SHISA7A6NL88 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.46■■■□□ 2.79
SHISA7A6NL88 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC32.46■■■□□ 2.79
SHISA7A6NL88 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC32.43■■■□□ 2.78
SHISA7A6NL88 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC32.38■■■□□ 2.77
SHISA7A6NL88 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC32.37■■■□□ 2.77
SHISA7A6NL88 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC32.36■■■□□ 2.77
SHISA7A6NL88 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC32.14■■■□□ 2.74
SHISA7A6NL88 ZNRF2P1-201ENST00000441407 443 ntBASIC32.08■■■□□ 2.73
SHISA7A6NL88 AC006077.2-201ENST00000623591 457 ntBASIC32.07■■■□□ 2.72
SHISA7A6NL88 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC32.01■■■□□ 2.71
SHISA7A6NL88 AC015813.7-201ENST00000623294 581 ntBASIC31.94■■■□□ 2.7
SHISA7A6NL88 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SHISA7A6NL88 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.68
SHISA7A6NL88 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC31.76■■■□□ 2.67
SHISA7A6NL88 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC31.63■■■□□ 2.65
SHISA7A6NL88 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
SHISA7A6NL88 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC31.46■■■□□ 2.63
SHISA7A6NL88 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
SHISA7A6NL88 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
SHISA7A6NL88 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
SHISA7A6NL88 AP002365.1-201ENST00000603448 772 ntBASIC31.27■■■□□ 2.6
SHISA7A6NL88 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.2■■■□□ 2.58
SHISA7A6NL88 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC31.15■■■□□ 2.58
SHISA7A6NL88 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC31.15■■■□□ 2.58
SHISA7A6NL88 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC31.14■■■□□ 2.58
SHISA7A6NL88 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC31.12■■■□□ 2.57
SHISA7A6NL88 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC31.08■■■□□ 2.57
SHISA7A6NL88 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC31.08■■■□□ 2.57
SHISA7A6NL88 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
SHISA7A6NL88 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC31.01■■■□□ 2.55
SHISA7A6NL88 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC30.99■■■□□ 2.55
SHISA7A6NL88 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
SHISA7A6NL88 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC30.98■■■□□ 2.55
SHISA7A6NL88 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC30.98■■■□□ 2.55
SHISA7A6NL88 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC30.97■■■□□ 2.55
SHISA7A6NL88 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC30.97■■■□□ 2.55
SHISA7A6NL88 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC30.95■■■□□ 2.55
SHISA7A6NL88 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC30.84■■■□□ 2.53
SHISA7A6NL88 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
SHISA7A6NL88 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC30.75■■■□□ 2.51
SHISA7A6NL88 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC30.75■■■□□ 2.51
SHISA7A6NL88 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
SHISA7A6NL88 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC30.71■■■□□ 2.51
SHISA7A6NL88 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC30.69■■■□□ 2.5
SHISA7A6NL88 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
SHISA7A6NL88 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC30.62■■■□□ 2.49
SHISA7A6NL88 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
SHISA7A6NL88 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
SHISA7A6NL88 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
SHISA7A6NL88 DYNLL1-208ENST00000550178 581 ntBASIC30.6■■■□□ 2.49
SHISA7A6NL88 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC30.58■■■□□ 2.49
SHISA7A6NL88 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
SHISA7A6NL88 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC30.56■■■□□ 2.48
SHISA7A6NL88 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC30.55■■■□□ 2.48
SHISA7A6NL88 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC30.53■■■□□ 2.48
SHISA7A6NL88 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC30.52■■■□□ 2.48
SHISA7A6NL88 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
SHISA7A6NL88 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC30.5■■■□□ 2.47
SHISA7A6NL88 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
SHISA7A6NL88 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC30.45■■■□□ 2.47
SHISA7A6NL88 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
SHISA7A6NL88 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
SHISA7A6NL88 AL031258.1-201ENST00000623562 325 ntBASIC30.41■■■□□ 2.46
SHISA7A6NL88 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC30.38■■■□□ 2.45
SHISA7A6NL88 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
SHISA7A6NL88 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC30.33■■■□□ 2.45
SHISA7A6NL88 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC30.27■■■□□ 2.44
SHISA7A6NL88 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC30.27■■■□□ 2.44
SHISA7A6NL88 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
SHISA7A6NL88 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC30.24■■■□□ 2.43
SHISA7A6NL88 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
SHISA7A6NL88 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC30.23■■■□□ 2.43
SHISA7A6NL88 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC30.22■■■□□ 2.43
SHISA7A6NL88 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC30.18■■■□□ 2.42
SHISA7A6NL88 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC30.18■■■□□ 2.42
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms