Protein–RNA interactions for Protein: A0A0C4DH55

IGKV3D-7, Immunoglobulin kappa variable 3D-7, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV3D-7A0A0C4DH55 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC23.57■■□□□ 1.36
IGKV3D-7A0A0C4DH55 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
IGKV3D-7A0A0C4DH55 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
IGKV3D-7A0A0C4DH55 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
IGKV3D-7A0A0C4DH55 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IGKV3D-7A0A0C4DH55 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IGKV3D-7A0A0C4DH55 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC20.49■□□□□ 0.87
IGKV3D-7A0A0C4DH55 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC20.45■□□□□ 0.86
IGKV3D-7A0A0C4DH55 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
IGKV3D-7A0A0C4DH55 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
IGKV3D-7A0A0C4DH55 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
IGKV3D-7A0A0C4DH55 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
IGKV3D-7A0A0C4DH55 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
IGKV3D-7A0A0C4DH55 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
IGKV3D-7A0A0C4DH55 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
IGKV3D-7A0A0C4DH55 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
IGKV3D-7A0A0C4DH55 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC19.73■□□□□ 0.75
IGKV3D-7A0A0C4DH55 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
IGKV3D-7A0A0C4DH55 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
IGKV3D-7A0A0C4DH55 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
IGKV3D-7A0A0C4DH55 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
IGKV3D-7A0A0C4DH55 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
IGKV3D-7A0A0C4DH55 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
IGKV3D-7A0A0C4DH55 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
IGKV3D-7A0A0C4DH55 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
IGKV3D-7A0A0C4DH55 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
IGKV3D-7A0A0C4DH55 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
IGKV3D-7A0A0C4DH55 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
IGKV3D-7A0A0C4DH55 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
IGKV3D-7A0A0C4DH55 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
IGKV3D-7A0A0C4DH55 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
IGKV3D-7A0A0C4DH55 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
IGKV3D-7A0A0C4DH55 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
IGKV3D-7A0A0C4DH55 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
IGKV3D-7A0A0C4DH55 HES6-203ENST00000409160 1600 ntTSL 2 BASIC19.14■□□□□ 0.66
IGKV3D-7A0A0C4DH55 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC19.14■□□□□ 0.65
IGKV3D-7A0A0C4DH55 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
IGKV3D-7A0A0C4DH55 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
IGKV3D-7A0A0C4DH55 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
IGKV3D-7A0A0C4DH55 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
IGKV3D-7A0A0C4DH55 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
IGKV3D-7A0A0C4DH55 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
IGKV3D-7A0A0C4DH55 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
IGKV3D-7A0A0C4DH55 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
IGKV3D-7A0A0C4DH55 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
IGKV3D-7A0A0C4DH55 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
IGKV3D-7A0A0C4DH55 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC18.98■□□□□ 0.63
IGKV3D-7A0A0C4DH55 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
IGKV3D-7A0A0C4DH55 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
IGKV3D-7A0A0C4DH55 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
IGKV3D-7A0A0C4DH55 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC18.94■□□□□ 0.62
IGKV3D-7A0A0C4DH55 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC18.94■□□□□ 0.62
IGKV3D-7A0A0C4DH55 ST7-205ENST00000393446 2114 ntTSL 5 BASIC18.93■□□□□ 0.62
IGKV3D-7A0A0C4DH55 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
IGKV3D-7A0A0C4DH55 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
IGKV3D-7A0A0C4DH55 ST7-202ENST00000323984 2142 ntTSL 5 BASIC18.89■□□□□ 0.61
IGKV3D-7A0A0C4DH55 ST7-207ENST00000393449 2127 ntTSL 5 BASIC18.89■□□□□ 0.61
IGKV3D-7A0A0C4DH55 MAFA-201ENST00000333480 2347 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
IGKV3D-7A0A0C4DH55 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC18.84■□□□□ 0.61
IGKV3D-7A0A0C4DH55 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
IGKV3D-7A0A0C4DH55 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
IGKV3D-7A0A0C4DH55 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV3D-7A0A0C4DH55 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
IGKV3D-7A0A0C4DH55 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC18.79■□□□□ 0.6
IGKV3D-7A0A0C4DH55 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
IGKV3D-7A0A0C4DH55 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC18.76■□□□□ 0.59
IGKV3D-7A0A0C4DH55 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGKV3D-7A0A0C4DH55 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
IGKV3D-7A0A0C4DH55 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
IGKV3D-7A0A0C4DH55 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
IGKV3D-7A0A0C4DH55 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
IGKV3D-7A0A0C4DH55 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC18.68■□□□□ 0.58
IGKV3D-7A0A0C4DH55 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
IGKV3D-7A0A0C4DH55 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC18.62■□□□□ 0.57
IGKV3D-7A0A0C4DH55 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
IGKV3D-7A0A0C4DH55 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
IGKV3D-7A0A0C4DH55 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC18.57■□□□□ 0.56
IGKV3D-7A0A0C4DH55 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
IGKV3D-7A0A0C4DH55 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
IGKV3D-7A0A0C4DH55 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
IGKV3D-7A0A0C4DH55 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV3D-7A0A0C4DH55 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
IGKV3D-7A0A0C4DH55 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC18.43■□□□□ 0.54
IGKV3D-7A0A0C4DH55 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
IGKV3D-7A0A0C4DH55 AL356512.1-201ENST00000607453 1739 ntBASIC18.43■□□□□ 0.54
IGKV3D-7A0A0C4DH55 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
IGKV3D-7A0A0C4DH55 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
IGKV3D-7A0A0C4DH55 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
IGKV3D-7A0A0C4DH55 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
IGKV3D-7A0A0C4DH55 AL161658.1-201ENST00000623641 1967 ntBASIC18.33■□□□□ 0.53
IGKV3D-7A0A0C4DH55 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC18.32■□□□□ 0.52
IGKV3D-7A0A0C4DH55 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
IGKV3D-7A0A0C4DH55 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
IGKV3D-7A0A0C4DH55 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
IGKV3D-7A0A0C4DH55 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
IGKV3D-7A0A0C4DH55 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
IGKV3D-7A0A0C4DH55 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
IGKV3D-7A0A0C4DH55 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
IGKV3D-7A0A0C4DH55 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
IGKV3D-7A0A0C4DH55 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms