Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
TRGV8A0A0C4DH27 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC30.6■■■□□ 2.49
TRGV8A0A0C4DH27 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC30.17■■■□□ 2.42
TRGV8A0A0C4DH27 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
TRGV8A0A0C4DH27 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
TRGV8A0A0C4DH27 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC29.74■■■□□ 2.35
TRGV8A0A0C4DH27 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
TRGV8A0A0C4DH27 AL356512.1-201ENST00000607453 1739 ntBASIC29.5■■■□□ 2.31
TRGV8A0A0C4DH27 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC29.36■■■□□ 2.29
TRGV8A0A0C4DH27 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC29.27■■■□□ 2.28
TRGV8A0A0C4DH27 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC29.12■■■□□ 2.25
TRGV8A0A0C4DH27 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC29.06■■■□□ 2.24
TRGV8A0A0C4DH27 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
TRGV8A0A0C4DH27 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC29.04■■■□□ 2.24
TRGV8A0A0C4DH27 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC28.87■■■□□ 2.21
TRGV8A0A0C4DH27 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC28.83■■■□□ 2.21
TRGV8A0A0C4DH27 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC28.74■■■□□ 2.19
TRGV8A0A0C4DH27 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
TRGV8A0A0C4DH27 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
TRGV8A0A0C4DH27 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.14
TRGV8A0A0C4DH27 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
TRGV8A0A0C4DH27 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC28.43■■■□□ 2.14
TRGV8A0A0C4DH27 HES6-203ENST00000409160 1600 ntTSL 2 BASIC28.41■■■□□ 2.14
TRGV8A0A0C4DH27 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC28.41■■■□□ 2.14
TRGV8A0A0C4DH27 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
TRGV8A0A0C4DH27 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
TRGV8A0A0C4DH27 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC28.19■■■□□ 2.1
TRGV8A0A0C4DH27 INO80B-203ENST00000409917 796 ntTSL 2 BASIC28.18■■■□□ 2.1
TRGV8A0A0C4DH27 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
TRGV8A0A0C4DH27 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
TRGV8A0A0C4DH27 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC28.12■■■□□ 2.09
TRGV8A0A0C4DH27 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC28.03■■■□□ 2.08
TRGV8A0A0C4DH27 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC27.87■■■□□ 2.05
TRGV8A0A0C4DH27 ZNRF2P1-201ENST00000441407 443 ntBASIC27.86■■■□□ 2.05
TRGV8A0A0C4DH27 AC006077.2-201ENST00000623591 457 ntBASIC27.85■■■□□ 2.05
TRGV8A0A0C4DH27 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC27.8■■■□□ 2.04
TRGV8A0A0C4DH27 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC27.8■■■□□ 2.04
TRGV8A0A0C4DH27 AC015813.7-201ENST00000623294 581 ntBASIC27.72■■■□□ 2.03
TRGV8A0A0C4DH27 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC27.65■■■□□ 2.02
TRGV8A0A0C4DH27 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC27.64■■■□□ 2.02
TRGV8A0A0C4DH27 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC27.53■■■□□ 2
TRGV8A0A0C4DH27 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
TRGV8A0A0C4DH27 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
TRGV8A0A0C4DH27 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
TRGV8A0A0C4DH27 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC27.32■■□□□ 1.96
TRGV8A0A0C4DH27 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
TRGV8A0A0C4DH27 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC27.21■■□□□ 1.95
TRGV8A0A0C4DH27 AP002365.1-201ENST00000603448 772 ntBASIC27.18■■□□□ 1.94
TRGV8A0A0C4DH27 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TRGV8A0A0C4DH27 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC27.1■■□□□ 1.93
TRGV8A0A0C4DH27 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC27.06■■□□□ 1.92
TRGV8A0A0C4DH27 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TRGV8A0A0C4DH27 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC27.01■■□□□ 1.91
TRGV8A0A0C4DH27 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
TRGV8A0A0C4DH27 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
TRGV8A0A0C4DH27 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC26.95■■□□□ 1.9
TRGV8A0A0C4DH27 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC26.95■■□□□ 1.9
TRGV8A0A0C4DH27 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC26.94■■□□□ 1.9
TRGV8A0A0C4DH27 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TRGV8A0A0C4DH27 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC26.92■■□□□ 1.9
TRGV8A0A0C4DH27 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC26.91■■□□□ 1.9
TRGV8A0A0C4DH27 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC26.85■■□□□ 1.89
TRGV8A0A0C4DH27 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
TRGV8A0A0C4DH27 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC26.84■■□□□ 1.89
TRGV8A0A0C4DH27 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
TRGV8A0A0C4DH27 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC26.78■■□□□ 1.88
TRGV8A0A0C4DH27 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
TRGV8A0A0C4DH27 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
TRGV8A0A0C4DH27 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
TRGV8A0A0C4DH27 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.73■■□□□ 1.87
TRGV8A0A0C4DH27 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
TRGV8A0A0C4DH27 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC26.7■■□□□ 1.86
TRGV8A0A0C4DH27 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
TRGV8A0A0C4DH27 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
TRGV8A0A0C4DH27 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC26.66■■□□□ 1.86
TRGV8A0A0C4DH27 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC26.66■■□□□ 1.86
TRGV8A0A0C4DH27 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TRGV8A0A0C4DH27 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
TRGV8A0A0C4DH27 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
TRGV8A0A0C4DH27 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC26.58■■□□□ 1.85
TRGV8A0A0C4DH27 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC26.57■■□□□ 1.84
TRGV8A0A0C4DH27 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TRGV8A0A0C4DH27 DYNLL1-208ENST00000550178 581 ntBASIC26.57■■□□□ 1.84
TRGV8A0A0C4DH27 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC26.54■■□□□ 1.84
TRGV8A0A0C4DH27 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
TRGV8A0A0C4DH27 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TRGV8A0A0C4DH27 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
TRGV8A0A0C4DH27 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC26.44■■□□□ 1.82
TRGV8A0A0C4DH27 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.43■■□□□ 1.82
TRGV8A0A0C4DH27 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC26.42■■□□□ 1.82
TRGV8A0A0C4DH27 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
TRGV8A0A0C4DH27 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC26.38■■□□□ 1.81
TRGV8A0A0C4DH27 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC26.38■■□□□ 1.81
TRGV8A0A0C4DH27 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC26.37■■□□□ 1.81
TRGV8A0A0C4DH27 AL031258.1-201ENST00000623562 325 ntBASIC26.33■■□□□ 1.81
TRGV8A0A0C4DH27 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC26.32■■□□□ 1.8
TRGV8A0A0C4DH27 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
TRGV8A0A0C4DH27 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
TRGV8A0A0C4DH27 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
TRGV8A0A0C4DH27 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms