Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC44.91■■■■■ 4.78
LOC102724428A0A0B4J2F2 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC44.53■■■■■ 4.72
LOC102724428A0A0B4J2F2 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC43.92■■■■■ 4.62
LOC102724428A0A0B4J2F2 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC43.8■■■■■ 4.6
LOC102724428A0A0B4J2F2 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC43.41■■■■■ 4.54
LOC102724428A0A0B4J2F2 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC43.14■■■■■ 4.5
LOC102724428A0A0B4J2F2 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC42.93■■■■■ 4.46
LOC102724428A0A0B4J2F2 AL356512.1-201ENST00000607453 1739 ntBASIC42.79■■■■■ 4.44
LOC102724428A0A0B4J2F2 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC42.64■■■■■ 4.42
LOC102724428A0A0B4J2F2 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC42.43■■■■■ 4.38
LOC102724428A0A0B4J2F2 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC42.3■■■■■ 4.36
LOC102724428A0A0B4J2F2 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC42.26■■■■■ 4.36
LOC102724428A0A0B4J2F2 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC42.23■■■■■ 4.35
LOC102724428A0A0B4J2F2 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC42.18■■■■■ 4.34
LOC102724428A0A0B4J2F2 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC41.84■■■■■ 4.29
LOC102724428A0A0B4J2F2 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC41.8■■■■■ 4.28
LOC102724428A0A0B4J2F2 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC41.78■■■■■ 4.28
LOC102724428A0A0B4J2F2 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC41.74■■■■■ 4.27
LOC102724428A0A0B4J2F2 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC41.71■■■■■ 4.27
LOC102724428A0A0B4J2F2 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC41.27■■■■■ 4.2
LOC102724428A0A0B4J2F2 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC41.27■■■■■ 4.2
LOC102724428A0A0B4J2F2 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC41.19■■■■■ 4.18
LOC102724428A0A0B4J2F2 HES6-203ENST00000409160 1600 ntTSL 2 BASIC41.18■■■■■ 4.18
LOC102724428A0A0B4J2F2 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC41.13■■■■■ 4.18
LOC102724428A0A0B4J2F2 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC41.09■■■■■ 4.17
LOC102724428A0A0B4J2F2 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC41.08■■■■■ 4.17
LOC102724428A0A0B4J2F2 INO80B-203ENST00000409917 796 ntTSL 2 BASIC40.99■■■■■ 4.15
LOC102724428A0A0B4J2F2 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC40.97■■■■■ 4.15
LOC102724428A0A0B4J2F2 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC40.94■■■■■ 4.14
LOC102724428A0A0B4J2F2 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC40.91■■■■■ 4.14
LOC102724428A0A0B4J2F2 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC40.9■■■■■ 4.14
LOC102724428A0A0B4J2F2 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC40.7■■■■■ 4.11
LOC102724428A0A0B4J2F2 ZNRF2P1-201ENST00000441407 443 ntBASIC40.55■■■■■ 4.08
LOC102724428A0A0B4J2F2 AC006077.2-201ENST00000623591 457 ntBASIC40.55■■■■■ 4.08
LOC102724428A0A0B4J2F2 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC40.49■■■■■ 4.07
LOC102724428A0A0B4J2F2 AC015813.7-201ENST00000623294 581 ntBASIC40.34■■■■■ 4.05
LOC102724428A0A0B4J2F2 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC40.29■■■■■ 4.04
LOC102724428A0A0B4J2F2 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC40.27■■■■■ 4.04
LOC102724428A0A0B4J2F2 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC40.17■■■■■ 4.02
LOC102724428A0A0B4J2F2 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC40.06■■■■■ 4
LOC102724428A0A0B4J2F2 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC39.98■■■■□ 3.99
LOC102724428A0A0B4J2F2 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC39.72■■■■□ 3.95
LOC102724428A0A0B4J2F2 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC39.71■■■■□ 3.95
LOC102724428A0A0B4J2F2 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC39.68■■■■□ 3.94
LOC102724428A0A0B4J2F2 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC39.65■■■■□ 3.94
LOC102724428A0A0B4J2F2 AP002365.1-201ENST00000603448 772 ntBASIC39.54■■■■□ 3.92
LOC102724428A0A0B4J2F2 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC39.48■■■■□ 3.91
LOC102724428A0A0B4J2F2 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC39.47■■■■□ 3.91
LOC102724428A0A0B4J2F2 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC39.37■■■■□ 3.89
LOC102724428A0A0B4J2F2 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC39.3■■■■□ 3.88
LOC102724428A0A0B4J2F2 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC39.29■■■■□ 3.88
LOC102724428A0A0B4J2F2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC39.28■■■■□ 3.88
LOC102724428A0A0B4J2F2 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC39.25■■■■□ 3.87
LOC102724428A0A0B4J2F2 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC39.23■■■■□ 3.87
LOC102724428A0A0B4J2F2 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC39.21■■■■□ 3.87
LOC102724428A0A0B4J2F2 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC39.21■■■■□ 3.87
LOC102724428A0A0B4J2F2 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC39.2■■■■□ 3.87
LOC102724428A0A0B4J2F2 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC39.18■■■■□ 3.86
LOC102724428A0A0B4J2F2 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC39.18■■■■□ 3.86
LOC102724428A0A0B4J2F2 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC39.12■■■■□ 3.85
LOC102724428A0A0B4J2F2 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC39.11■■■■□ 3.85
LOC102724428A0A0B4J2F2 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC39.09■■■■□ 3.85
LOC102724428A0A0B4J2F2 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC39.03■■■■□ 3.84
LOC102724428A0A0B4J2F2 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC39.01■■■■□ 3.84
LOC102724428A0A0B4J2F2 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC38.92■■■■□ 3.82
LOC102724428A0A0B4J2F2 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC38.87■■■■□ 3.81
LOC102724428A0A0B4J2F2 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC38.85■■■■□ 3.81
LOC102724428A0A0B4J2F2 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC38.83■■■■□ 3.81
LOC102724428A0A0B4J2F2 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC38.82■■■■□ 3.8
LOC102724428A0A0B4J2F2 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC38.79■■■■□ 3.8
LOC102724428A0A0B4J2F2 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC38.78■■■■□ 3.8
LOC102724428A0A0B4J2F2 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC38.74■■■■□ 3.79
LOC102724428A0A0B4J2F2 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC38.69■■■■□ 3.78
LOC102724428A0A0B4J2F2 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC38.67■■■■□ 3.78
LOC102724428A0A0B4J2F2 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC38.66■■■■□ 3.78
LOC102724428A0A0B4J2F2 DYNLL1-208ENST00000550178 581 ntBASIC38.66■■■■□ 3.78
LOC102724428A0A0B4J2F2 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC38.65■■■■□ 3.78
LOC102724428A0A0B4J2F2 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC38.65■■■■□ 3.78
LOC102724428A0A0B4J2F2 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC38.64■■■■□ 3.78
LOC102724428A0A0B4J2F2 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC38.63■■■■□ 3.77
LOC102724428A0A0B4J2F2 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC38.6■■■■□ 3.77
LOC102724428A0A0B4J2F2 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC38.6■■■■□ 3.77
LOC102724428A0A0B4J2F2 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC38.57■■■■□ 3.77
LOC102724428A0A0B4J2F2 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC38.54■■■■□ 3.76
LOC102724428A0A0B4J2F2 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
LOC102724428A0A0B4J2F2 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC38.46■■■■□ 3.75
LOC102724428A0A0B4J2F2 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC38.42■■■■□ 3.74
LOC102724428A0A0B4J2F2 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC38.39■■■■□ 3.74
LOC102724428A0A0B4J2F2 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC38.37■■■■□ 3.73
LOC102724428A0A0B4J2F2 AL031258.1-201ENST00000623562 325 ntBASIC38.37■■■■□ 3.73
LOC102724428A0A0B4J2F2 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC38.35■■■■□ 3.73
LOC102724428A0A0B4J2F2 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC38.34■■■■□ 3.73
LOC102724428A0A0B4J2F2 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC38.28■■■■□ 3.72
LOC102724428A0A0B4J2F2 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
LOC102724428A0A0B4J2F2 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC38.25■■■■□ 3.71
LOC102724428A0A0B4J2F2 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC38.22■■■■□ 3.71
LOC102724428A0A0B4J2F2 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC38.21■■■■□ 3.71
LOC102724428A0A0B4J2F2 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC38.2■■■■□ 3.71
LOC102724428A0A0B4J2F2 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC38.16■■■■□ 3.7
LOC102724428A0A0B4J2F2 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC38.16■■■■□ 3.7
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms