Protein–RNA interactions for Protein: A0A087WSY4

IGHV4-30-2, Immunoglobulin heavy variable 4-30-2, humanhuman

Predictions only

Length 118 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-30-2A0A087WSY4 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC28.98■■■□□ 2.23
IGHV4-30-2A0A087WSY4 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC28.57■■■□□ 2.16
IGHV4-30-2A0A087WSY4 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
IGHV4-30-2A0A087WSY4 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC28.15■■■□□ 2.1
IGHV4-30-2A0A087WSY4 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
IGHV4-30-2A0A087WSY4 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC27.9■■■□□ 2.06
IGHV4-30-2A0A087WSY4 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC27.84■■■□□ 2.05
IGHV4-30-2A0A087WSY4 AL356512.1-201ENST00000607453 1739 ntBASIC27.71■■■□□ 2.03
IGHV4-30-2A0A087WSY4 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC27.41■■□□□ 1.98
IGHV4-30-2A0A087WSY4 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC27.28■■□□□ 1.96
IGHV4-30-2A0A087WSY4 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC27.19■■□□□ 1.94
IGHV4-30-2A0A087WSY4 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC27.18■■□□□ 1.94
IGHV4-30-2A0A087WSY4 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
IGHV4-30-2A0A087WSY4 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC27.05■■□□□ 1.92
IGHV4-30-2A0A087WSY4 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
IGHV4-30-2A0A087WSY4 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
IGHV4-30-2A0A087WSY4 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC26.9■■□□□ 1.9
IGHV4-30-2A0A087WSY4 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
IGHV4-30-2A0A087WSY4 HES6-203ENST00000409160 1600 ntTSL 2 BASIC26.76■■□□□ 1.87
IGHV4-30-2A0A087WSY4 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
IGHV4-30-2A0A087WSY4 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC26.56■■□□□ 1.84
IGHV4-30-2A0A087WSY4 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
IGHV4-30-2A0A087WSY4 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
IGHV4-30-2A0A087WSY4 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC26.54■■□□□ 1.84
IGHV4-30-2A0A087WSY4 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC26.48■■□□□ 1.83
IGHV4-30-2A0A087WSY4 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
IGHV4-30-2A0A087WSY4 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC26.44■■□□□ 1.82
IGHV4-30-2A0A087WSY4 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
IGHV4-30-2A0A087WSY4 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
IGHV4-30-2A0A087WSY4 INO80B-203ENST00000409917 796 ntTSL 2 BASIC26.33■■□□□ 1.81
IGHV4-30-2A0A087WSY4 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
IGHV4-30-2A0A087WSY4 MAF-203ENST00000569649 1217 ntAPPRIS ALT2 TSL 5 BASIC26.13■■□□□ 1.77
IGHV4-30-2A0A087WSY4 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
IGHV4-30-2A0A087WSY4 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC25.99■■□□□ 1.75
IGHV4-30-2A0A087WSY4 ZNRF2P1-201ENST00000441407 443 ntBASIC25.96■■□□□ 1.75
IGHV4-30-2A0A087WSY4 AC006077.2-201ENST00000623591 457 ntBASIC25.96■■□□□ 1.75
IGHV4-30-2A0A087WSY4 AC015813.7-201ENST00000623294 581 ntBASIC25.91■■□□□ 1.74
IGHV4-30-2A0A087WSY4 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC25.89■■□□□ 1.74
IGHV4-30-2A0A087WSY4 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC25.81■■□□□ 1.72
IGHV4-30-2A0A087WSY4 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
IGHV4-30-2A0A087WSY4 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
IGHV4-30-2A0A087WSY4 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
IGHV4-30-2A0A087WSY4 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
IGHV4-30-2A0A087WSY4 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC25.62■■□□□ 1.69
IGHV4-30-2A0A087WSY4 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
IGHV4-30-2A0A087WSY4 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC25.55■■□□□ 1.68
IGHV4-30-2A0A087WSY4 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
IGHV4-30-2A0A087WSY4 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
IGHV4-30-2A0A087WSY4 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC25.44■■□□□ 1.66
IGHV4-30-2A0A087WSY4 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC25.44■■□□□ 1.66
IGHV4-30-2A0A087WSY4 AP002365.1-201ENST00000603448 772 ntBASIC25.32■■□□□ 1.64
IGHV4-30-2A0A087WSY4 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
IGHV4-30-2A0A087WSY4 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC25.18■■□□□ 1.62
IGHV4-30-2A0A087WSY4 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC25.16■■□□□ 1.62
IGHV4-30-2A0A087WSY4 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC25.16■■□□□ 1.62
IGHV4-30-2A0A087WSY4 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
IGHV4-30-2A0A087WSY4 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC25.14■■□□□ 1.62
IGHV4-30-2A0A087WSY4 MBD2-205ENST00000583046 1182 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
IGHV4-30-2A0A087WSY4 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
IGHV4-30-2A0A087WSY4 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
IGHV4-30-2A0A087WSY4 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
IGHV4-30-2A0A087WSY4 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC25.09■■□□□ 1.61
IGHV4-30-2A0A087WSY4 AC005524.1-203ENST00000586528 451 ntTSL 3 BASIC25.07■■□□□ 1.6
IGHV4-30-2A0A087WSY4 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
IGHV4-30-2A0A087WSY4 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC25.06■■□□□ 1.6
IGHV4-30-2A0A087WSY4 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
IGHV4-30-2A0A087WSY4 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC25.01■■□□□ 1.59
IGHV4-30-2A0A087WSY4 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC24.99■■□□□ 1.59
IGHV4-30-2A0A087WSY4 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
IGHV4-30-2A0A087WSY4 CHCHD4-202ENST00000396914 1405 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
IGHV4-30-2A0A087WSY4 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC24.96■■□□□ 1.59
IGHV4-30-2A0A087WSY4 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
IGHV4-30-2A0A087WSY4 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
IGHV4-30-2A0A087WSY4 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC24.95■■□□□ 1.58
IGHV4-30-2A0A087WSY4 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
IGHV4-30-2A0A087WSY4 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC24.9■■□□□ 1.58
IGHV4-30-2A0A087WSY4 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC24.89■■□□□ 1.58
IGHV4-30-2A0A087WSY4 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC24.88■■□□□ 1.57
IGHV4-30-2A0A087WSY4 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC24.87■■□□□ 1.57
IGHV4-30-2A0A087WSY4 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC24.86■■□□□ 1.57
IGHV4-30-2A0A087WSY4 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC24.85■■□□□ 1.57
IGHV4-30-2A0A087WSY4 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC24.83■■□□□ 1.57
IGHV4-30-2A0A087WSY4 DYNLL1-207ENST00000549989 719 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
IGHV4-30-2A0A087WSY4 DYNLL1-208ENST00000550178 581 ntBASIC24.83■■□□□ 1.57
IGHV4-30-2A0A087WSY4 GSTZ1-201ENST00000216465 1338 ntAPPRIS P2 TSL 1 (best) BASIC24.83■■□□□ 1.56
IGHV4-30-2A0A087WSY4 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
IGHV4-30-2A0A087WSY4 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC24.8■■□□□ 1.56
IGHV4-30-2A0A087WSY4 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
IGHV4-30-2A0A087WSY4 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC24.78■■□□□ 1.56
IGHV4-30-2A0A087WSY4 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
IGHV4-30-2A0A087WSY4 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC24.73■■□□□ 1.55
IGHV4-30-2A0A087WSY4 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC24.72■■□□□ 1.55
IGHV4-30-2A0A087WSY4 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
IGHV4-30-2A0A087WSY4 ANKRD65-203ENST00000454272 1506 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
IGHV4-30-2A0A087WSY4 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
IGHV4-30-2A0A087WSY4 AL031258.1-201ENST00000623562 325 ntBASIC24.62■■□□□ 1.53
IGHV4-30-2A0A087WSY4 PLPP2-203ENST00000434325 1383 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
IGHV4-30-2A0A087WSY4 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC24.6■■□□□ 1.53
IGHV4-30-2A0A087WSY4 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
IGHV4-30-2A0A087WSY4 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms