Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
TTC39CQ8N584 AP002414.2-202ENST00000590929 1450 ntBASIC27.17■■□□□ 1.94
TTC39CQ8N584 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
TTC39CQ8N584 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
TTC39CQ8N584 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
TTC39CQ8N584 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
TTC39CQ8N584 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
TTC39CQ8N584 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC27.15■■□□□ 1.94
TTC39CQ8N584 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
TTC39CQ8N584 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
TTC39CQ8N584 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
TTC39CQ8N584 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
TTC39CQ8N584 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.12■■□□□ 1.93
TTC39CQ8N584 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC27.12■■□□□ 1.93
TTC39CQ8N584 DRD5P2-201ENST00000421395 2012 ntBASIC27.12■■□□□ 1.93
TTC39CQ8N584 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TTC39CQ8N584 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC27.11■■□□□ 1.93
TTC39CQ8N584 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TTC39CQ8N584 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC27.11■■□□□ 1.93
TTC39CQ8N584 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TTC39CQ8N584 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TTC39CQ8N584 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
TTC39CQ8N584 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
TTC39CQ8N584 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
TTC39CQ8N584 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC27.09■■□□□ 1.93
TTC39CQ8N584 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
TTC39CQ8N584 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.09■■□□□ 1.93
TTC39CQ8N584 PEX7-203ENST00000541292 945 ntTSL 5 BASIC27.09■■□□□ 1.93
TTC39CQ8N584 MIR3648-2-201ENST00000581792 180 ntBASIC27.09■■□□□ 1.93
TTC39CQ8N584 MIR3648-1-201ENST00000615959 180 ntBASIC27.09■■□□□ 1.93
TTC39CQ8N584 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC27.09■■□□□ 1.93
TTC39CQ8N584 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC27.08■■□□□ 1.93
TTC39CQ8N584 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
TTC39CQ8N584 CR559946.2-201ENST00000623684 991 ntBASIC27.08■■□□□ 1.93
TTC39CQ8N584 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC27.08■■□□□ 1.93
TTC39CQ8N584 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC27.08■■□□□ 1.93
TTC39CQ8N584 GDI1-215ENST00000630693 786 ntTSL 4 BASIC27.07■■□□□ 1.92
TTC39CQ8N584 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
TTC39CQ8N584 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
TTC39CQ8N584 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
TTC39CQ8N584 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC27.06■■□□□ 1.92
TTC39CQ8N584 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.06■■□□□ 1.92
TTC39CQ8N584 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
TTC39CQ8N584 RPS2-210ENST00000530225 765 ntTSL 2 BASIC27.05■■□□□ 1.92
TTC39CQ8N584 AC008813.1-201ENST00000536597 885 ntBASIC27.05■■□□□ 1.92
TTC39CQ8N584 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
TTC39CQ8N584 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
TTC39CQ8N584 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
TTC39CQ8N584 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
TTC39CQ8N584 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC27.04■■□□□ 1.92
TTC39CQ8N584 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.03■■□□□ 1.92
TTC39CQ8N584 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
TTC39CQ8N584 PVT1-219ENST00000523427 938 ntTSL 3 BASIC27.03■■□□□ 1.92
TTC39CQ8N584 AC142086.6-201ENST00000621154 1765 ntBASIC27.03■■□□□ 1.92
TTC39CQ8N584 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.03■■□□□ 1.92
TTC39CQ8N584 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
TTC39CQ8N584 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC27.02■■□□□ 1.92
TTC39CQ8N584 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TTC39CQ8N584 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC27.02■■□□□ 1.92
TTC39CQ8N584 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.02■■□□□ 1.92
TTC39CQ8N584 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
TTC39CQ8N584 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
TTC39CQ8N584 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
TTC39CQ8N584 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
TTC39CQ8N584 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
TTC39CQ8N584 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC27■■□□□ 1.91
TTC39CQ8N584 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC27■■□□□ 1.91
TTC39CQ8N584 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27■■□□□ 1.91
TTC39CQ8N584 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TTC39CQ8N584 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
TTC39CQ8N584 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TTC39CQ8N584 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.99■■□□□ 1.91
TTC39CQ8N584 AC016575.1-201ENST00000607026 382 ntBASIC26.99■■□□□ 1.91
TTC39CQ8N584 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
TTC39CQ8N584 AC018358.1-201ENST00000631079 1402 ntBASIC26.99■■□□□ 1.91
TTC39CQ8N584 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
TTC39CQ8N584 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
TTC39CQ8N584 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC26.97■■□□□ 1.91
TTC39CQ8N584 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
TTC39CQ8N584 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.96■■□□□ 1.91
TTC39CQ8N584 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
TTC39CQ8N584 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
TTC39CQ8N584 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC26.96■■□□□ 1.91
TTC39CQ8N584 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC26.95■■□□□ 1.91
TTC39CQ8N584 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.95■■□□□ 1.9
TTC39CQ8N584 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
TTC39CQ8N584 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC26.95■■□□□ 1.9
TTC39CQ8N584 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TTC39CQ8N584 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TTC39CQ8N584 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.94■■□□□ 1.9
TTC39CQ8N584 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
TTC39CQ8N584 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC26.94■■□□□ 1.9
TTC39CQ8N584 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
TTC39CQ8N584 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC26.93■■□□□ 1.9
TTC39CQ8N584 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.93■■□□□ 1.9
TTC39CQ8N584 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.93■■□□□ 1.9
TTC39CQ8N584 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC26.93■■□□□ 1.9
TTC39CQ8N584 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC26.92■■□□□ 1.9
TTC39CQ8N584 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC26.92■■□□□ 1.9
TTC39CQ8N584 MIR639-201ENST00000384974 98 ntBASIC26.92■■□□□ 1.9
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms