Protein–RNA interactions for Protein: Q5SRH9

TTC39A, Tetratricopeptide repeat protein 39A, humanhuman

Predictions only

Length 613 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39AQ5SRH9 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC31.1■■■□□ 2.57
TTC39AQ5SRH9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TTC39AQ5SRH9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.1■■■□□ 2.57
TTC39AQ5SRH9 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.1■■■□□ 2.57
TTC39AQ5SRH9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC31.1■■■□□ 2.57
TTC39AQ5SRH9 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC31.1■■■□□ 2.57
TTC39AQ5SRH9 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
TTC39AQ5SRH9 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.1■■■□□ 2.57
TTC39AQ5SRH9 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
TTC39AQ5SRH9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC31.09■■■□□ 2.57
TTC39AQ5SRH9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
TTC39AQ5SRH9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.09■■■□□ 2.57
TTC39AQ5SRH9 PEX7-203ENST00000541292 945 ntTSL 5 BASIC31.09■■■□□ 2.57
TTC39AQ5SRH9 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC31.09■■■□□ 2.57
TTC39AQ5SRH9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.09■■■□□ 2.57
TTC39AQ5SRH9 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.08■■■□□ 2.57
TTC39AQ5SRH9 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC31.08■■■□□ 2.57
TTC39AQ5SRH9 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.08■■■□□ 2.57
TTC39AQ5SRH9 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC31.07■■■□□ 2.56
TTC39AQ5SRH9 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
TTC39AQ5SRH9 AC139426.1-201ENST00000568218 2529 ntBASIC31.06■■■□□ 2.56
TTC39AQ5SRH9 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.06■■■□□ 2.56
TTC39AQ5SRH9 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC31.06■■■□□ 2.56
TTC39AQ5SRH9 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TTC39AQ5SRH9 AC008813.1-201ENST00000536597 885 ntBASIC31.06■■■□□ 2.56
TTC39AQ5SRH9 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
TTC39AQ5SRH9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
TTC39AQ5SRH9 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.05■■■□□ 2.56
TTC39AQ5SRH9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC31.05■■■□□ 2.56
TTC39AQ5SRH9 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC31.05■■■□□ 2.56
TTC39AQ5SRH9 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.04■■■□□ 2.56
TTC39AQ5SRH9 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC31.03■■■□□ 2.56
TTC39AQ5SRH9 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC31.02■■■□□ 2.56
TTC39AQ5SRH9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.02■■■□□ 2.56
TTC39AQ5SRH9 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.02■■■□□ 2.56
TTC39AQ5SRH9 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
TTC39AQ5SRH9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC31.01■■■□□ 2.55
TTC39AQ5SRH9 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
TTC39AQ5SRH9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC31.01■■■□□ 2.55
TTC39AQ5SRH9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC31.01■■■□□ 2.55
TTC39AQ5SRH9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC31.01■■■□□ 2.55
TTC39AQ5SRH9 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC31.01■■■□□ 2.55
TTC39AQ5SRH9 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC31■■■□□ 2.55
TTC39AQ5SRH9 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TTC39AQ5SRH9 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
TTC39AQ5SRH9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC31■■■□□ 2.55
TTC39AQ5SRH9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
TTC39AQ5SRH9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
TTC39AQ5SRH9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
TTC39AQ5SRH9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
TTC39AQ5SRH9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
TTC39AQ5SRH9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
TTC39AQ5SRH9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
TTC39AQ5SRH9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.98■■■□□ 2.55
TTC39AQ5SRH9 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.97■■■□□ 2.55
TTC39AQ5SRH9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC30.97■■■□□ 2.55
TTC39AQ5SRH9 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC30.96■■■□□ 2.55
TTC39AQ5SRH9 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.96■■■□□ 2.55
TTC39AQ5SRH9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
TTC39AQ5SRH9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
TTC39AQ5SRH9 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC30.95■■■□□ 2.55
TTC39AQ5SRH9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC30.95■■■□□ 2.55
TTC39AQ5SRH9 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC30.95■■■□□ 2.55
TTC39AQ5SRH9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC30.95■■■□□ 2.55
TTC39AQ5SRH9 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC30.95■■■□□ 2.54
TTC39AQ5SRH9 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC30.93■■■□□ 2.54
TTC39AQ5SRH9 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC30.93■■■□□ 2.54
TTC39AQ5SRH9 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.93■■■□□ 2.54
TTC39AQ5SRH9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
TTC39AQ5SRH9 CHST11-203ENST00000547956 936 ntTSL 2 BASIC30.93■■■□□ 2.54
TTC39AQ5SRH9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC30.93■■■□□ 2.54
TTC39AQ5SRH9 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
TTC39AQ5SRH9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
TTC39AQ5SRH9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
TTC39AQ5SRH9 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
TTC39AQ5SRH9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC30.9■■■□□ 2.54
TTC39AQ5SRH9 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
TTC39AQ5SRH9 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC30.9■■■□□ 2.54
TTC39AQ5SRH9 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC30.9■■■□□ 2.54
TTC39AQ5SRH9 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC30.9■■■□□ 2.54
TTC39AQ5SRH9 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC30.89■■■□□ 2.54
TTC39AQ5SRH9 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
TTC39AQ5SRH9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
TTC39AQ5SRH9 AC148477.6-201ENST00000623746 465 ntBASIC30.89■■■□□ 2.54
TTC39AQ5SRH9 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.89■■■□□ 2.54
TTC39AQ5SRH9 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.89■■■□□ 2.54
TTC39AQ5SRH9 SRP68-213ENST00000629930 165 ntTSL 5 BASIC30.88■■■□□ 2.53
TTC39AQ5SRH9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TTC39AQ5SRH9 AP002414.2-202ENST00000590929 1450 ntBASIC30.88■■■□□ 2.53
TTC39AQ5SRH9 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.88■■■□□ 2.53
TTC39AQ5SRH9 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC30.87■■■□□ 2.53
TTC39AQ5SRH9 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC30.87■■■□□ 2.53
TTC39AQ5SRH9 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
TTC39AQ5SRH9 TPT1-202ENST00000379055 948 ntTSL 2 BASIC30.86■■■□□ 2.53
TTC39AQ5SRH9 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC30.85■■■□□ 2.53
TTC39AQ5SRH9 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
TTC39AQ5SRH9 MIR219A2-201ENST00000608502 1504 ntBASIC30.85■■■□□ 2.53
TTC39AQ5SRH9 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC30.85■■■□□ 2.53
TTC39AQ5SRH9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
TTC39AQ5SRH9 ABHD17AP3-201ENST00000503096 1137 ntBASIC30.85■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms