Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
RAB40ALP0C0E4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC24.03■■□□□ 1.44
RAB40ALP0C0E4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC24.03■■□□□ 1.44
RAB40ALP0C0E4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.03■■□□□ 1.44
RAB40ALP0C0E4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RAB40ALP0C0E4 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC24.02■■□□□ 1.44
RAB40ALP0C0E4 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC24.02■■□□□ 1.44
RAB40ALP0C0E4 AC022413.1-201ENST00000624602 984 ntBASIC24.02■■□□□ 1.44
RAB40ALP0C0E4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RAB40ALP0C0E4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
RAB40ALP0C0E4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
RAB40ALP0C0E4 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RAB40ALP0C0E4 HES4-202ENST00000428771 1040 ntTSL 2 BASIC24.01■■□□□ 1.43
RAB40ALP0C0E4 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RAB40ALP0C0E4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RAB40ALP0C0E4 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC24.01■■□□□ 1.43
RAB40ALP0C0E4 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RAB40ALP0C0E4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RAB40ALP0C0E4 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24■■□□□ 1.43
RAB40ALP0C0E4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
RAB40ALP0C0E4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAB40ALP0C0E4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.99■■□□□ 1.43
RAB40ALP0C0E4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAB40ALP0C0E4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC23.99■■□□□ 1.43
RAB40ALP0C0E4 ABHD17AP5-201ENST00000580133 923 ntBASIC23.99■■□□□ 1.43
RAB40ALP0C0E4 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RAB40ALP0C0E4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
RAB40ALP0C0E4 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
RAB40ALP0C0E4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAB40ALP0C0E4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.98■■□□□ 1.43
RAB40ALP0C0E4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RAB40ALP0C0E4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
RAB40ALP0C0E4 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
RAB40ALP0C0E4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
RAB40ALP0C0E4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.97■■□□□ 1.43
RAB40ALP0C0E4 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
RAB40ALP0C0E4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.96■■□□□ 1.43
RAB40ALP0C0E4 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
RAB40ALP0C0E4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RAB40ALP0C0E4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
RAB40ALP0C0E4 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
RAB40ALP0C0E4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC23.96■■□□□ 1.43
RAB40ALP0C0E4 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.95■■□□□ 1.43
RAB40ALP0C0E4 AP004833.2-201ENST00000532228 1454 ntBASIC23.95■■□□□ 1.42
RAB40ALP0C0E4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
RAB40ALP0C0E4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.95■■□□□ 1.42
RAB40ALP0C0E4 ST7-AS1-201ENST00000456775 1889 ntBASIC23.95■■□□□ 1.42
RAB40ALP0C0E4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
RAB40ALP0C0E4 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.94■■□□□ 1.42
RAB40ALP0C0E4 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
RAB40ALP0C0E4 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
RAB40ALP0C0E4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
RAB40ALP0C0E4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC23.93■■□□□ 1.42
RAB40ALP0C0E4 ABCB10P1-201ENST00000614297 2181 ntBASIC23.93■■□□□ 1.42
RAB40ALP0C0E4 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC23.93■■□□□ 1.42
RAB40ALP0C0E4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
RAB40ALP0C0E4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RAB40ALP0C0E4 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
RAB40ALP0C0E4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.91■■□□□ 1.42
RAB40ALP0C0E4 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RAB40ALP0C0E4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.91■■□□□ 1.42
RAB40ALP0C0E4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
RAB40ALP0C0E4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RAB40ALP0C0E4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
RAB40ALP0C0E4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
RAB40ALP0C0E4 MIR219A2-201ENST00000608502 1504 ntBASIC23.9■■□□□ 1.42
RAB40ALP0C0E4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
RAB40ALP0C0E4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
RAB40ALP0C0E4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.89■■□□□ 1.41
RAB40ALP0C0E4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
RAB40ALP0C0E4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RAB40ALP0C0E4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC23.88■■□□□ 1.41
RAB40ALP0C0E4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
RAB40ALP0C0E4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
RAB40ALP0C0E4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RAB40ALP0C0E4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RAB40ALP0C0E4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
RAB40ALP0C0E4 AC060814.1-201ENST00000554326 538 ntBASIC23.87■■□□□ 1.41
RAB40ALP0C0E4 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RAB40ALP0C0E4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RAB40ALP0C0E4 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RAB40ALP0C0E4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RAB40ALP0C0E4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAB40ALP0C0E4 ABCB10P3-201ENST00000561950 2166 ntBASIC23.84■■□□□ 1.41
RAB40ALP0C0E4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.84■■□□□ 1.41
RAB40ALP0C0E4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAB40ALP0C0E4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RAB40ALP0C0E4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RAB40ALP0C0E4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAB40ALP0C0E4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RAB40ALP0C0E4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RAB40ALP0C0E4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
RAB40ALP0C0E4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RAB40ALP0C0E4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAB40ALP0C0E4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RAB40ALP0C0E4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.81■■□□□ 1.4
RAB40ALP0C0E4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.8■■□□□ 1.4
RAB40ALP0C0E4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC23.8■■□□□ 1.4
RAB40ALP0C0E4 AC126177.7-201ENST00000547904 679 ntBASIC23.8■■□□□ 1.4
RAB40ALP0C0E4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.8■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms