Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
TBC1D3BA6NDS4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TBC1D3BA6NDS4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.04■■□□□ 1.76
TBC1D3BA6NDS4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TBC1D3BA6NDS4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
TBC1D3BA6NDS4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TBC1D3BA6NDS4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
TBC1D3BA6NDS4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TBC1D3BA6NDS4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TBC1D3BA6NDS4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.02■■□□□ 1.76
TBC1D3BA6NDS4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.02■■□□□ 1.76
TBC1D3BA6NDS4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TBC1D3BA6NDS4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TBC1D3BA6NDS4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
TBC1D3BA6NDS4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.02■■□□□ 1.76
TBC1D3BA6NDS4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TBC1D3BA6NDS4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
TBC1D3BA6NDS4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
TBC1D3BA6NDS4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
TBC1D3BA6NDS4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.01■■□□□ 1.75
TBC1D3BA6NDS4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26■■□□□ 1.75
TBC1D3BA6NDS4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
TBC1D3BA6NDS4 MIR219A2-201ENST00000608502 1504 ntBASIC25.99■■□□□ 1.75
TBC1D3BA6NDS4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.99■■□□□ 1.75
TBC1D3BA6NDS4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
TBC1D3BA6NDS4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TBC1D3BA6NDS4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.98■■□□□ 1.75
TBC1D3BA6NDS4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
TBC1D3BA6NDS4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
TBC1D3BA6NDS4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TBC1D3BA6NDS4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TBC1D3BA6NDS4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
TBC1D3BA6NDS4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.95■■□□□ 1.75
TBC1D3BA6NDS4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TBC1D3BA6NDS4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D3BA6NDS4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D3BA6NDS4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D3BA6NDS4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D3BA6NDS4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D3BA6NDS4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D3BA6NDS4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D3BA6NDS4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.93■■□□□ 1.74
TBC1D3BA6NDS4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TBC1D3BA6NDS4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
TBC1D3BA6NDS4 AC060814.1-201ENST00000554326 538 ntBASIC25.93■■□□□ 1.74
TBC1D3BA6NDS4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.92■■□□□ 1.74
TBC1D3BA6NDS4 AP004833.2-201ENST00000532228 1454 ntBASIC25.92■■□□□ 1.74
TBC1D3BA6NDS4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.92■■□□□ 1.74
TBC1D3BA6NDS4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.92■■□□□ 1.74
TBC1D3BA6NDS4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TBC1D3BA6NDS4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TBC1D3BA6NDS4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TBC1D3BA6NDS4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
TBC1D3BA6NDS4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TBC1D3BA6NDS4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TBC1D3BA6NDS4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
TBC1D3BA6NDS4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
TBC1D3BA6NDS4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
TBC1D3BA6NDS4 NTF6A-201ENST00000591175 560 ntBASIC25.88■■□□□ 1.73
TBC1D3BA6NDS4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
TBC1D3BA6NDS4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
TBC1D3BA6NDS4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
TBC1D3BA6NDS4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
TBC1D3BA6NDS4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TBC1D3BA6NDS4 AC100797.4-201ENST00000631653 1827 ntBASIC25.86■■□□□ 1.73
TBC1D3BA6NDS4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TBC1D3BA6NDS4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
TBC1D3BA6NDS4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
TBC1D3BA6NDS4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
TBC1D3BA6NDS4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
TBC1D3BA6NDS4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
TBC1D3BA6NDS4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.84■■□□□ 1.73
TBC1D3BA6NDS4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
TBC1D3BA6NDS4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.83■■□□□ 1.73
TBC1D3BA6NDS4 AC126177.7-201ENST00000547904 679 ntBASIC25.83■■□□□ 1.73
TBC1D3BA6NDS4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
TBC1D3BA6NDS4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TBC1D3BA6NDS4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.81■■□□□ 1.72
TBC1D3BA6NDS4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TBC1D3BA6NDS4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.8■■□□□ 1.72
TBC1D3BA6NDS4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.8■■□□□ 1.72
TBC1D3BA6NDS4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TBC1D3BA6NDS4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
TBC1D3BA6NDS4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.79■■□□□ 1.72
TBC1D3BA6NDS4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.78■■□□□ 1.72
TBC1D3BA6NDS4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.78■■□□□ 1.72
TBC1D3BA6NDS4 AC092296.2-201ENST00000589470 999 ntBASIC25.78■■□□□ 1.72
TBC1D3BA6NDS4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.78■■□□□ 1.72
TBC1D3BA6NDS4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TBC1D3BA6NDS4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.77■■□□□ 1.72
TBC1D3BA6NDS4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.77■■□□□ 1.72
TBC1D3BA6NDS4 AC012354.3-201ENST00000623734 483 ntBASIC25.77■■□□□ 1.72
TBC1D3BA6NDS4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TBC1D3BA6NDS4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
TBC1D3BA6NDS4 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.76■■□□□ 1.71
TBC1D3BA6NDS4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TBC1D3BA6NDS4 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.76■■□□□ 1.71
TBC1D3BA6NDS4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
TBC1D3BA6NDS4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
TBC1D3BA6NDS4 ECEL1P2-201ENST00000461596 1295 ntBASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms