Protein–RNA interactions for Protein: A6NDS4

TBC1D3B, TBC1 domain family member 3B, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3BA6NDS4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
TBC1D3BA6NDS4 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TBC1D3BA6NDS4 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.04■■□□□ 1.76
TBC1D3BA6NDS4 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
TBC1D3BA6NDS4 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
TBC1D3BA6NDS4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
TBC1D3BA6NDS4 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
TBC1D3BA6NDS4 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
TBC1D3BA6NDS4 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
TBC1D3BA6NDS4 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.02■■□□□ 1.76
TBC1D3BA6NDS4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.02■■□□□ 1.76
TBC1D3BA6NDS4 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TBC1D3BA6NDS4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
TBC1D3BA6NDS4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.02■■□□□ 1.76
TBC1D3BA6NDS4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC26.02■■□□□ 1.76
TBC1D3BA6NDS4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
TBC1D3BA6NDS4 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
TBC1D3BA6NDS4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
TBC1D3BA6NDS4 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC26.01■■□□□ 1.75
TBC1D3BA6NDS4 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC26.01■■□□□ 1.75
TBC1D3BA6NDS4 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26■■□□□ 1.75
TBC1D3BA6NDS4 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26■■□□□ 1.75
TBC1D3BA6NDS4 MIR219A2-201ENST00000608502 1504 ntBASIC25.99■■□□□ 1.75
TBC1D3BA6NDS4 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC25.99■■□□□ 1.75
TBC1D3BA6NDS4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
TBC1D3BA6NDS4 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
TBC1D3BA6NDS4 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC25.98■■□□□ 1.75
TBC1D3BA6NDS4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC25.98■■□□□ 1.75
TBC1D3BA6NDS4 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.98■■□□□ 1.75
TBC1D3BA6NDS4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TBC1D3BA6NDS4 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
TBC1D3BA6NDS4 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
TBC1D3BA6NDS4 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC25.95■■□□□ 1.75
TBC1D3BA6NDS4 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
TBC1D3BA6NDS4 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D3BA6NDS4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D3BA6NDS4 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D3BA6NDS4 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D3BA6NDS4 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D3BA6NDS4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D3BA6NDS4 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
TBC1D3BA6NDS4 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC25.93■■□□□ 1.74
TBC1D3BA6NDS4 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
TBC1D3BA6NDS4 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
TBC1D3BA6NDS4 AC060814.1-201ENST00000554326 538 ntBASIC25.93■■□□□ 1.74
TBC1D3BA6NDS4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC25.92■■□□□ 1.74
TBC1D3BA6NDS4 AP004833.2-201ENST00000532228 1454 ntBASIC25.92■■□□□ 1.74
TBC1D3BA6NDS4 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC25.92■■□□□ 1.74
TBC1D3BA6NDS4 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC25.92■■□□□ 1.74
TBC1D3BA6NDS4 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
TBC1D3BA6NDS4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
TBC1D3BA6NDS4 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
TBC1D3BA6NDS4 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
TBC1D3BA6NDS4 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TBC1D3BA6NDS4 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
TBC1D3BA6NDS4 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.74
TBC1D3BA6NDS4 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
TBC1D3BA6NDS4 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
TBC1D3BA6NDS4 NTF6A-201ENST00000591175 560 ntBASIC25.88■■□□□ 1.73
TBC1D3BA6NDS4 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.87■■□□□ 1.73
TBC1D3BA6NDS4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
TBC1D3BA6NDS4 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
TBC1D3BA6NDS4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.86■■□□□ 1.73
TBC1D3BA6NDS4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
TBC1D3BA6NDS4 AC100797.4-201ENST00000631653 1827 ntBASIC25.86■■□□□ 1.73
TBC1D3BA6NDS4 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
TBC1D3BA6NDS4 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
TBC1D3BA6NDS4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
TBC1D3BA6NDS4 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
TBC1D3BA6NDS4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
TBC1D3BA6NDS4 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC25.84■■□□□ 1.73
TBC1D3BA6NDS4 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC25.84■■□□□ 1.73
TBC1D3BA6NDS4 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
TBC1D3BA6NDS4 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.83■■□□□ 1.73
TBC1D3BA6NDS4 AC126177.7-201ENST00000547904 679 ntBASIC25.83■■□□□ 1.73
TBC1D3BA6NDS4 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
TBC1D3BA6NDS4 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
TBC1D3BA6NDS4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.81■■□□□ 1.72
TBC1D3BA6NDS4 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TBC1D3BA6NDS4 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC25.8■■□□□ 1.72
TBC1D3BA6NDS4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC25.8■■□□□ 1.72
TBC1D3BA6NDS4 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
TBC1D3BA6NDS4 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
TBC1D3BA6NDS4 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC25.79■■□□□ 1.72
TBC1D3BA6NDS4 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC25.78■■□□□ 1.72
TBC1D3BA6NDS4 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC25.78■■□□□ 1.72
TBC1D3BA6NDS4 AC092296.2-201ENST00000589470 999 ntBASIC25.78■■□□□ 1.72
TBC1D3BA6NDS4 HYI-213ENST00000583037 1322 ntTSL 5 BASIC25.78■■□□□ 1.72
TBC1D3BA6NDS4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TBC1D3BA6NDS4 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC25.77■■□□□ 1.72
TBC1D3BA6NDS4 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC25.77■■□□□ 1.72
TBC1D3BA6NDS4 AC012354.3-201ENST00000623734 483 ntBASIC25.77■■□□□ 1.72
TBC1D3BA6NDS4 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
TBC1D3BA6NDS4 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
TBC1D3BA6NDS4 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.76■■□□□ 1.71
TBC1D3BA6NDS4 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
TBC1D3BA6NDS4 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.76■■□□□ 1.71
TBC1D3BA6NDS4 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.76■■□□□ 1.71
TBC1D3BA6NDS4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
TBC1D3BA6NDS4 ECEL1P2-201ENST00000461596 1295 ntBASIC25.75■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms