Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV18A0A075B6X5 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV18A0A075B6X5 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TRAV18A0A075B6X5 AC100797.4-201ENST00000631653 1827 ntBASIC21.73■■□□□ 1.07
TRAV18A0A075B6X5 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.73■■□□□ 1.07
TRAV18A0A075B6X5 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV18A0A075B6X5 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV18A0A075B6X5 COMMD3-201ENST00000376836 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
TRAV18A0A075B6X5 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TRAV18A0A075B6X5 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.72■■□□□ 1.07
TRAV18A0A075B6X5 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV18A0A075B6X5 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV18A0A075B6X5 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV18A0A075B6X5 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV18A0A075B6X5 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TRAV18A0A075B6X5 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.71■■□□□ 1.07
TRAV18A0A075B6X5 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.7■■□□□ 1.06
TRAV18A0A075B6X5 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV18A0A075B6X5 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV18A0A075B6X5 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
TRAV18A0A075B6X5 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV18A0A075B6X5 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
TRAV18A0A075B6X5 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV18A0A075B6X5 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV18A0A075B6X5 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV18A0A075B6X5 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV18A0A075B6X5 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.69■■□□□ 1.06
TRAV18A0A075B6X5 CCNYL1-205ENST00000420822 952 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV18A0A075B6X5 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV18A0A075B6X5 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
TRAV18A0A075B6X5 RHOC-208ENST00000369642 1355 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
TRAV18A0A075B6X5 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
TRAV18A0A075B6X5 AC091060.1-201ENST00000623524 1766 ntBASIC21.68■■□□□ 1.06
TRAV18A0A075B6X5 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV18A0A075B6X5 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV18A0A075B6X5 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV18A0A075B6X5 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV18A0A075B6X5 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV18A0A075B6X5 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV18A0A075B6X5 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV18A0A075B6X5 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
TRAV18A0A075B6X5 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV18A0A075B6X5 HOXD-AS2-202ENST00000440016 999 ntTSL 5 BASIC21.66■■□□□ 1.06
TRAV18A0A075B6X5 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
TRAV18A0A075B6X5 CDK2AP1-203ENST00000535979 1281 ntTSL 3 BASIC21.66■■□□□ 1.06
TRAV18A0A075B6X5 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV18A0A075B6X5 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
TRAV18A0A075B6X5 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
TRAV18A0A075B6X5 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV18A0A075B6X5 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV18A0A075B6X5 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV18A0A075B6X5 AC234582.1-201ENST00000447623 923 ntTSL 5 BASIC21.65■■□□□ 1.06
TRAV18A0A075B6X5 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
TRAV18A0A075B6X5 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.65■■□□□ 1.06
TRAV18A0A075B6X5 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
TRAV18A0A075B6X5 ATPAF1-201ENST00000329231 1241 ntTSL 2 BASIC21.64■■□□□ 1.05
TRAV18A0A075B6X5 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
TRAV18A0A075B6X5 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV18A0A075B6X5 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV18A0A075B6X5 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV18A0A075B6X5 LINC01089-207ENST00000538335 630 ntTSL 3 BASIC21.63■■□□□ 1.05
TRAV18A0A075B6X5 AP002414.2-202ENST00000590929 1450 ntBASIC21.63■■□□□ 1.05
TRAV18A0A075B6X5 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
TRAV18A0A075B6X5 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRAV18A0A075B6X5 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRAV18A0A075B6X5 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
TRAV18A0A075B6X5 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
TRAV18A0A075B6X5 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
TRAV18A0A075B6X5 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
TRAV18A0A075B6X5 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.6■■□□□ 1.05
TRAV18A0A075B6X5 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TRAV18A0A075B6X5 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
TRAV18A0A075B6X5 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRAV18A0A075B6X5 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TRAV18A0A075B6X5 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.58■■□□□ 1.05
TRAV18A0A075B6X5 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRAV18A0A075B6X5 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TRAV18A0A075B6X5 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV18A0A075B6X5 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
TRAV18A0A075B6X5 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TRAV18A0A075B6X5 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.57■■□□□ 1.04
TRAV18A0A075B6X5 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV18A0A075B6X5 IL13RA1-201ENST00000371642 1096 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV18A0A075B6X5 AL109917.1-201ENST00000412228 906 ntTSL 2 BASIC21.56■■□□□ 1.04
TRAV18A0A075B6X5 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.56■■□□□ 1.04
TRAV18A0A075B6X5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV18A0A075B6X5 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV18A0A075B6X5 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.56■■□□□ 1.04
TRAV18A0A075B6X5 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TRAV18A0A075B6X5 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV18A0A075B6X5 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
TRAV18A0A075B6X5 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.55■■□□□ 1.04
TRAV18A0A075B6X5 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.55■■□□□ 1.04
TRAV18A0A075B6X5 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV18A0A075B6X5 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.54■■□□□ 1.04
TRAV18A0A075B6X5 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV18A0A075B6X5 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
TRAV18A0A075B6X5 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV18A0A075B6X5 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
TRAV18A0A075B6X5 AUTS2-202ENST00000403018 957 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms