RNA–Protein interactions for RNA: ENST00000398148.7

KHSRP-201, Transcript of KH-type splicing regulatory protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene KHSRP, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHSRP-201ENST00000398148 NISCHQ9Y2I1 1504 aa45.77■■■■■ 4.92
KHSRP-201ENST00000398148 SHROOM4Q9ULL8 1493 aa41.27■■■■■ 4.2
KHSRP-201ENST00000398148 SUPT5HO00267 1087 aaKnown RBP40.86■■■■■ 4.13
KHSRP-201ENST00000398148 DCAF8L2P0C7V8 631 aa39.69■■■■□ 3.94
KHSRP-201ENST00000398148 PCGF6Q9BYE7 350 aa39.64■■■■□ 3.94
KHSRP-201ENST00000398148 HRCP23327 699 aa39.56■■■■□ 3.92
KHSRP-201ENST00000398148 PPARGC1BQ86YN6 1023 aaKnown RBP39.48■■■■□ 3.91
KHSRP-201ENST00000398148 MYO15BQ96JP2 1530 aa39.48■■■■□ 3.91
KHSRP-201ENST00000398148 CHIC1Q5VXU3 224 aa39.41■■■■□ 3.9
KHSRP-201ENST00000398148 LOC105371045A0A1W2PR82 267 aa38.94■■■■□ 3.82
KHSRP-201ENST00000398148 ZCCHC6Q5VYS8 1495 aaKnown RBP38.71■■■■□ 3.79
KHSRP-201ENST00000398148 EHMT2Q96KQ7 1210 aa38.3■■■■□ 3.72
KHSRP-201ENST00000398148 FAM9AQ8IZU1 332 aaPredicted RBP38.01■■■■□ 3.67
KHSRP-201ENST00000398148 TRIM26Q12899 539 aaPredicted RBP37.98■■■■□ 3.67
KHSRP-201ENST00000398148 CCDC180Q9P1Z9 1646 aa37.93■■■■□ 3.66
KHSRP-201ENST00000398148 DCAF1Q9Y4B6 1507 aa37.85■■■■□ 3.65
KHSRP-201ENST00000398148 TRIM41Q8WV44 630 aa37.5■■■■□ 3.59
KHSRP-201ENST00000398148 SCAF1Q9H7N4 1312 aaKnown RBP37.32■■■■□ 3.56
KHSRP-201ENST00000398148 ZEB1P37275 1124 aaPredicted RBP37.14■■■■□ 3.54
KHSRP-201ENST00000398148 TTBK1Q5TCY1 1321 aaPredicted RBP37.12■■■■□ 3.53
KHSRP-201ENST00000398148 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP37.01■■■■□ 3.52
KHSRP-201ENST00000398148 RSF1Q96T23 1441 aaPredicted RBP36.86■■■■□ 3.49
KHSRP-201ENST00000398148 SCRIBQ14160 1630 aa36.76■■■■□ 3.48
KHSRP-201ENST00000398148 CCER1Q8TC90 406 aaPredicted RBP36.76■■■■□ 3.47
KHSRP-201ENST00000398148 RB1CC1Q8TDY2 1594 aa36.67■■■■□ 3.46
KHSRP-201ENST00000398148 PELP1Q8IZL8 1130 aaKnown RBP36.65■■■■□ 3.46
KHSRP-201ENST00000398148 ABCC9O60706 1549 aa36.63■■■■□ 3.45
KHSRP-201ENST00000398148 NEUROD1Q13562 356 aa36.61■■■■□ 3.45
KHSRP-201ENST00000398148 ACIN1Q9UKV3 1341 aaKnown RBP36.41■■■■□ 3.42
KHSRP-201ENST00000398148 GTF3C3Q9Y5Q9 886 aa36.39■■■■□ 3.42
KHSRP-201ENST00000398148 DIEXFQ68CQ4 756 aaKnown RBP36.33■■■■□ 3.41
KHSRP-201ENST00000398148 CECR2Q9BXF3 1484 aa36.26■■■■□ 3.4
KHSRP-201ENST00000398148 YTHDC1Q96MU7 727 aaKnown RBP36.24■■■■□ 3.39
KHSRP-201ENST00000398148 CENPBP07199 599 aaPredicted RBP36■■■■□ 3.35
KHSRP-201ENST00000398148 MROH2BQ7Z745 1585 aa35.98■■■■□ 3.35
KHSRP-201ENST00000398148 UBTFP17480 764 aaKnown RBP35.83■■■■□ 3.33
KHSRP-201ENST00000398148 WIZO95785 1651 aa35.83■■■■□ 3.33
KHSRP-201ENST00000398148 HNRNPUL2Q1KMD3 747 aaKnown RBP35.76■■■■□ 3.31
KHSRP-201ENST00000398148 RANGAP1P46060 587 aaPredicted RBP35.75■■■■□ 3.31
KHSRP-201ENST00000398148 ABCC8Q09428 1581 aa35.65■■■■□ 3.3
KHSRP-201ENST00000398148 ZNF316A6NFI3 1004 aaPredicted RBP35.61■■■■□ 3.29
KHSRP-201ENST00000398148 CCDC88BA6NC98 1476 aa35.59■■■■□ 3.29
KHSRP-201ENST00000398148 MIER1Q8N108 512 aa35.58■■■■□ 3.29
KHSRP-201ENST00000398148 SOGA1O94964 1423 aa35.55■■■■□ 3.28
KHSRP-201ENST00000398148 CEP162Q5TB80 1403 aa35.54■■■■□ 3.28
KHSRP-201ENST00000398148 RUSC2Q8N2Y8 1516 aa35.41■■■■□ 3.26
KHSRP-201ENST00000398148 CSRNP3Q8WYN3 585 aa35.36■■■■□ 3.25
KHSRP-201ENST00000398148 NACADO15069 1562 aa35.18■■■■□ 3.22
KHSRP-201ENST00000398148 WRNQ14191 1432 aaPredicted RBP eCLIP35.14■■■■□ 3.22
KHSRP-201ENST00000398148 TNIKQ9UKE5 1360 aa35.13■■■■□ 3.21
KHSRP-201ENST00000398148 BAZ1AQ9NRL2 1556 aaPredicted RBP35.12■■■■□ 3.21
KHSRP-201ENST00000398148 PABPN1Q86U42 306 aaKnown RBP eCLIP35.04■■■■□ 3.25e-7■□□□□ 8.6
KHSRP-201ENST00000398148 EIF4G1Q04637 1599 aaKnown RBP35.02■■■■□ 3.2
KHSRP-201ENST00000398148 APLP2Q06481 763 aa35.01■■■■□ 3.19
KHSRP-201ENST00000398148 MYT1Q01538 1121 aa34.86■■■■□ 3.17
KHSRP-201ENST00000398148 SMARCA2P51531 1590 aa34.8■■■■□ 3.16
KHSRP-201ENST00000398148 TOP2AP11388 1531 aaKnown RBP34.8■■■■□ 3.16
KHSRP-201ENST00000398148 GOLGA3Q08378 1498 aa34.78■■■■□ 3.16
KHSRP-201ENST00000398148 ITGAEP38570 1179 aa34.76■■■■□ 3.15
KHSRP-201ENST00000398148 CLIP1P30622 1438 aa34.73■■■■□ 3.15
KHSRP-201ENST00000398148 SMARCA4P51532 1647 aa34.64■■■■□ 3.14
KHSRP-201ENST00000398148 SUPT16HQ9Y5B9 1047 aaKnown RBP34.59■■■■□ 3.13
KHSRP-201ENST00000398148 BCANQ96GW7 911 aa34.57■■■■□ 3.13
KHSRP-201ENST00000398148 KCNH8Q96L42 1107 aa34.56■■■■□ 3.12
KHSRP-201ENST00000398148 EEA1Q15075 1411 aa34.55■■■■□ 3.12
KHSRP-201ENST00000398148 KANK4Q5T7N3 995 aaPredicted RBP34.48■■■■□ 3.11
KHSRP-201ENST00000398148 RAPGEF2Q9Y4G8 1499 aa34.47■■■■□ 3.11
KHSRP-201ENST00000398148 CEP164Q9UPV0 1460 aa34.43■■■■□ 3.1
KHSRP-201ENST00000398148 VPS8Q8N3P4 1428 aa34.43■■■■□ 3.1
KHSRP-201ENST00000398148 SYNJ1O43426 1573 aa34.35■■■■□ 3.09
KHSRP-201ENST00000398148 DHX57Q6P158 1386 aaKnown RBP34.32■■■■□ 3.08
KHSRP-201ENST00000398148 TSHZ2Q9NRE2 1034 aa34.25■■■■□ 3.07
KHSRP-201ENST00000398148 HIRIP3Q9BW71 556 aaPredicted RBP34.24■■■■□ 3.07
KHSRP-201ENST00000398148 KIF21BO75037 1637 aa34.17■■■■□ 3.06
KHSRP-201ENST00000398148 DDX10Q13206 875 aaKnown RBP34.11■■■■□ 3.05
KHSRP-201ENST00000398148 UNC13AQ9UPW8 1703 aa34.1■■■■□ 3.05
KHSRP-201ENST00000398148 FKBP8Q14318 412 aa34.07■■■■□ 3.04
KHSRP-201ENST00000398148 ATP1B4Q9UN42 357 aaPredicted RBP34.02■■■■□ 3.04
KHSRP-201ENST00000398148 SIN3AQ96ST3 1273 aa34■■■■□ 3.03
KHSRP-201ENST00000398148 TRIM52Q96A61 297 aa33.96■■■■□ 3.03
KHSRP-201ENST00000398148 FAM50AQ14320 339 aaKnown RBP33.88■■■■□ 3.01
KHSRP-201ENST00000398148 ANP32EQ9BTT0 268 aa33.86■■■■□ 3.01
KHSRP-201ENST00000398148 P3H3Q8IVL6 736 aa33.86■■■■□ 3.01
KHSRP-201ENST00000398148 ARAP1Q96P48 1450 aa33.85■■■■□ 3.01
KHSRP-201ENST00000398148 BAZ1BQ9UIG0 1483 aaKnown RBP33.85■■■■□ 3.01
KHSRP-201ENST00000398148 CLSPNQ9HAW4 1339 aa33.85■■■■□ 3.01
KHSRP-201ENST00000398148 CCNB3Q8WWL7 1395 aa33.78■■■■□ 3
KHSRP-201ENST00000398148 BICRAQ9NZM4 1560 aa33.76■■■■□ 3
KHSRP-201ENST00000398148 RAB3GAP2Q9H2M9 1393 aa33.76■■■□□ 2.99
KHSRP-201ENST00000398148 ATAD2BQ9ULI0 1458 aa33.75■■■□□ 2.99
KHSRP-201ENST00000398148 IRX6P78412 446 aaPredicted RBP33.65■■■□□ 2.98
KHSRP-201ENST00000398148 NEFLP07196 543 aa33.62■■■□□ 2.97
KHSRP-201ENST00000398148 RRBP1Q9P2E9 1410 aaKnown RBP33.58■■■□□ 2.97
KHSRP-201ENST00000398148 PRXQ9BXM0 1461 aa33.56■■■□□ 2.96
KHSRP-201ENST00000398148 RBM19Q9Y4C8 960 aaKnown RBP33.56■■■□□ 2.96
KHSRP-201ENST00000398148 PEG3Q9GZU2 1588 aa33.52■■■□□ 2.96
KHSRP-201ENST00000398148 BCL11AQ9H165 835 aa33.49■■■□□ 2.95
KHSRP-201ENST00000398148 TOP2BQ02880 1626 aa33.49■■■□□ 2.95
KHSRP-201ENST00000398148 WDR97A6NE52 1622 aa33.48■■■□□ 2.95
KHSRP-201ENST00000398148 ARHGAP35Q9NRY4 1499 aa33.47■■■□□ 2.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms