Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 MIR639-201ENST00000384974 98 ntBASIC38.62■■■■□ 3.77
HFM1A2PYH4 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC38.61■■■■□ 3.77
HFM1A2PYH4 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC38.6■■■■□ 3.77
HFM1A2PYH4 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC38.6■■■■□ 3.77
HFM1A2PYH4 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
HFM1A2PYH4 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC38.59■■■■□ 3.77
HFM1A2PYH4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC38.59■■■■□ 3.77
HFM1A2PYH4 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC38.59■■■■□ 3.77
HFM1A2PYH4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC38.58■■■■□ 3.77
HFM1A2PYH4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC38.58■■■■□ 3.77
HFM1A2PYH4 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC38.58■■■■□ 3.77
HFM1A2PYH4 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC38.58■■■■□ 3.77
HFM1A2PYH4 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC38.57■■■■□ 3.77
HFM1A2PYH4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC38.56■■■■□ 3.76
HFM1A2PYH4 AP004833.2-201ENST00000532228 1454 ntBASIC38.55■■■■□ 3.76
HFM1A2PYH4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC38.54■■■■□ 3.76
HFM1A2PYH4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC38.54■■■■□ 3.76
HFM1A2PYH4 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC38.53■■■■□ 3.76
HFM1A2PYH4 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC38.53■■■■□ 3.76
HFM1A2PYH4 MIR4449-201ENST00000578365 66 ntBASIC38.52■■■■□ 3.76
HFM1A2PYH4 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC38.51■■■■□ 3.76
HFM1A2PYH4 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC38.51■■■■□ 3.76
HFM1A2PYH4 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC38.5■■■■□ 3.75
HFM1A2PYH4 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC38.5■■■■□ 3.75
HFM1A2PYH4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC38.49■■■■□ 3.75
HFM1A2PYH4 HES6-205ENST00000409356 528 ntTSL 2 BASIC38.49■■■■□ 3.75
HFM1A2PYH4 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC38.49■■■■□ 3.75
HFM1A2PYH4 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC38.48■■■■□ 3.75
HFM1A2PYH4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC38.47■■■■□ 3.75
HFM1A2PYH4 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
HFM1A2PYH4 AL139393.2-201ENST00000608721 2025 ntBASIC38.46■■■■□ 3.75
HFM1A2PYH4 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC38.46■■■■□ 3.75
HFM1A2PYH4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC38.46■■■■□ 3.75
HFM1A2PYH4 MEST-211ENST00000437945 1455 ntTSL 5 BASIC38.45■■■■□ 3.75
HFM1A2PYH4 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC38.44■■■■□ 3.74
HFM1A2PYH4 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC38.44■■■■□ 3.74
HFM1A2PYH4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC38.44■■■■□ 3.74
HFM1A2PYH4 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC38.43■■■■□ 3.74
HFM1A2PYH4 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC38.43■■■■□ 3.74
HFM1A2PYH4 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC38.41■■■■□ 3.74
HFM1A2PYH4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC38.41■■■■□ 3.74
HFM1A2PYH4 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC38.4■■■■□ 3.74
HFM1A2PYH4 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC38.4■■■■□ 3.74
HFM1A2PYH4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC38.4■■■■□ 3.74
HFM1A2PYH4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC38.39■■■■□ 3.74
HFM1A2PYH4 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC38.38■■■■□ 3.73
HFM1A2PYH4 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC38.38■■■■□ 3.73
HFM1A2PYH4 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
HFM1A2PYH4 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
HFM1A2PYH4 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC38.37■■■■□ 3.73
HFM1A2PYH4 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC38.37■■■■□ 3.73
HFM1A2PYH4 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC38.37■■■■□ 3.73
HFM1A2PYH4 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC38.35■■■■□ 3.73
HFM1A2PYH4 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC38.35■■■■□ 3.73
HFM1A2PYH4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC38.35■■■■□ 3.73
HFM1A2PYH4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC38.35■■■■□ 3.73
HFM1A2PYH4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC38.34■■■■□ 3.73
HFM1A2PYH4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC38.33■■■■□ 3.73
HFM1A2PYH4 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC38.33■■■■□ 3.73
HFM1A2PYH4 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC38.32■■■■□ 3.73
HFM1A2PYH4 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC38.32■■■■□ 3.73
HFM1A2PYH4 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC38.32■■■■□ 3.72
HFM1A2PYH4 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC38.31■■■■□ 3.72
HFM1A2PYH4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC38.31■■■■□ 3.72
HFM1A2PYH4 PEX7-203ENST00000541292 945 ntTSL 5 BASIC38.31■■■■□ 3.72
HFM1A2PYH4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC38.31■■■■□ 3.72
HFM1A2PYH4 AC110285.7-201ENST00000624417 1536 ntBASIC38.31■■■■□ 3.72
HFM1A2PYH4 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC38.3■■■■□ 3.72
HFM1A2PYH4 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC38.3■■■■□ 3.72
HFM1A2PYH4 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC38.3■■■■□ 3.72
HFM1A2PYH4 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC38.29■■■■□ 3.72
HFM1A2PYH4 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC38.29■■■■□ 3.72
HFM1A2PYH4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC38.29■■■■□ 3.72
HFM1A2PYH4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC38.29■■■■□ 3.72
HFM1A2PYH4 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC38.28■■■■□ 3.72
HFM1A2PYH4 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC38.27■■■■□ 3.72
HFM1A2PYH4 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC38.27■■■■□ 3.72
HFM1A2PYH4 AC100797.4-201ENST00000631653 1827 ntBASIC38.26■■■■□ 3.72
HFM1A2PYH4 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC38.26■■■■□ 3.72
HFM1A2PYH4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC38.26■■■■□ 3.72
HFM1A2PYH4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC38.26■■■■□ 3.72
HFM1A2PYH4 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC38.26■■■■□ 3.72
HFM1A2PYH4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC38.25■■■■□ 3.71
HFM1A2PYH4 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC38.25■■■■□ 3.71
HFM1A2PYH4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC38.23■■■■□ 3.71
HFM1A2PYH4 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC38.23■■■■□ 3.71
HFM1A2PYH4 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC38.23■■■■□ 3.71
HFM1A2PYH4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC38.23■■■■□ 3.71
HFM1A2PYH4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC38.22■■■■□ 3.71
HFM1A2PYH4 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC38.22■■■■□ 3.71
HFM1A2PYH4 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC38.22■■■■□ 3.71
HFM1A2PYH4 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC38.22■■■■□ 3.71
HFM1A2PYH4 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
HFM1A2PYH4 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC38.21■■■■□ 3.71
HFM1A2PYH4 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC38.2■■■■□ 3.71
HFM1A2PYH4 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC38.19■■■■□ 3.7
HFM1A2PYH4 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
HFM1A2PYH4 RPS2-210ENST00000530225 765 ntTSL 2 BASIC38.19■■■■□ 3.7
HFM1A2PYH4 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
HFM1A2PYH4 ABCB10P3-201ENST00000561950 2166 ntBASIC38.17■■■■□ 3.7
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms