Protein–RNA interactions for Protein: A0A1W2PPB8

Uncharacterized protein, humanhuman

Predictions only

Length 328 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PPB8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC23.5■■□□□ 1.35
A0A1W2PPB8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
A0A1W2PPB8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
A0A1W2PPB8 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.48■■□□□ 1.35
A0A1W2PPB8 ABCB10P1-201ENST00000614297 2181 ntBASIC23.48■■□□□ 1.35
A0A1W2PPB8 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
A0A1W2PPB8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
A0A1W2PPB8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
A0A1W2PPB8 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
A0A1W2PPB8 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC23.46■■□□□ 1.35
A0A1W2PPB8 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC23.46■■□□□ 1.35
A0A1W2PPB8 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC23.44■■□□□ 1.34
A0A1W2PPB8 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC23.44■■□□□ 1.34
A0A1W2PPB8 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
A0A1W2PPB8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC23.44■■□□□ 1.34
A0A1W2PPB8 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.43■■□□□ 1.34
A0A1W2PPB8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.43■■□□□ 1.34
A0A1W2PPB8 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
A0A1W2PPB8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
A0A1W2PPB8 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
A0A1W2PPB8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC23.42■■□□□ 1.34
A0A1W2PPB8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
A0A1W2PPB8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
A0A1W2PPB8 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.41■■□□□ 1.34
A0A1W2PPB8 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC23.41■■□□□ 1.34
A0A1W2PPB8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
A0A1W2PPB8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
A0A1W2PPB8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.4■■□□□ 1.34
A0A1W2PPB8 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.4■■□□□ 1.34
A0A1W2PPB8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
A0A1W2PPB8 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
A0A1W2PPB8 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
A0A1W2PPB8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
A0A1W2PPB8 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.39■■□□□ 1.33
A0A1W2PPB8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
A0A1W2PPB8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC23.39■■□□□ 1.33
A0A1W2PPB8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC23.39■■□□□ 1.33
A0A1W2PPB8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
A0A1W2PPB8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC23.38■■□□□ 1.33
A0A1W2PPB8 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
A0A1W2PPB8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
A0A1W2PPB8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
A0A1W2PPB8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC23.38■■□□□ 1.33
A0A1W2PPB8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
A0A1W2PPB8 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
A0A1W2PPB8 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.37■■□□□ 1.33
A0A1W2PPB8 AC110285.7-201ENST00000624417 1536 ntBASIC23.37■■□□□ 1.33
A0A1W2PPB8 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
A0A1W2PPB8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC23.36■■□□□ 1.33
A0A1W2PPB8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.36■■□□□ 1.33
A0A1W2PPB8 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
A0A1W2PPB8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC23.35■■□□□ 1.33
A0A1W2PPB8 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
A0A1W2PPB8 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
A0A1W2PPB8 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
A0A1W2PPB8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC23.34■■□□□ 1.33
A0A1W2PPB8 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
A0A1W2PPB8 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
A0A1W2PPB8 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
A0A1W2PPB8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC23.33■■□□□ 1.33
A0A1W2PPB8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
A0A1W2PPB8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
A0A1W2PPB8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
A0A1W2PPB8 AL139393.2-201ENST00000608721 2025 ntBASIC23.32■■□□□ 1.32
A0A1W2PPB8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC23.32■■□□□ 1.32
A0A1W2PPB8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
A0A1W2PPB8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
A0A1W2PPB8 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.31■■□□□ 1.32
A0A1W2PPB8 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
A0A1W2PPB8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
A0A1W2PPB8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
A0A1W2PPB8 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
A0A1W2PPB8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
A0A1W2PPB8 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
A0A1W2PPB8 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.31■■□□□ 1.32
A0A1W2PPB8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
A0A1W2PPB8 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC23.3■■□□□ 1.32
A0A1W2PPB8 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
A0A1W2PPB8 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC23.29■■□□□ 1.32
A0A1W2PPB8 AC100797.4-201ENST00000631653 1827 ntBASIC23.29■■□□□ 1.32
A0A1W2PPB8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.29■■□□□ 1.32
A0A1W2PPB8 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
A0A1W2PPB8 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
A0A1W2PPB8 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
A0A1W2PPB8 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
A0A1W2PPB8 HSD17B1P1-201ENST00000590052 955 ntBASIC23.29■■□□□ 1.32
A0A1W2PPB8 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
A0A1W2PPB8 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
A0A1W2PPB8 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
A0A1W2PPB8 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
A0A1W2PPB8 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
A0A1W2PPB8 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
A0A1W2PPB8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
A0A1W2PPB8 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC23.28■■□□□ 1.32
A0A1W2PPB8 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC23.28■■□□□ 1.32
A0A1W2PPB8 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.28■■□□□ 1.32
A0A1W2PPB8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
A0A1W2PPB8 AP004833.2-201ENST00000532228 1454 ntBASIC23.28■■□□□ 1.32
A0A1W2PPB8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
A0A1W2PPB8 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms