Protein–RNA interactions for Protein: Q5T1V6

DDX59, Probable ATP-dependent RNA helicase DDX59, humanhuman

Known RBP eCLIP

Length 619 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX59Q5T1V6 KMT2C-202ENST00000355193 16858 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.264e-7■□□□□ 9.1
DDX59Q5T1V6 KMT2C-212ENST00000558084 16862 ntTSL 1 (best)7.21□□□□□ -1.264e-7■□□□□ 9.1
DDX59Q5T1V6 KMT2C-213ENST00000558665 538 ntTSL 34.77□□□□□ -1.654e-7■□□□□ 9.1
DDX59Q5T1V6 KMT2C-208ENST00000473186 12854 ntTSL 1 (best)4.18□□□□□ -1.744e-7■□□□□ 9.1
DDX59Q5T1V6 SEZ6L2-209ENST00000617533 3555 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.769e-12■□□□□ 9.1
DDX59Q5T1V6 SEZ6L2-204ENST00000537485 3423 ntAPPRIS ALT2 TSL 2 BASIC10□□□□□ -0.819e-12■□□□□ 9.1
DDX59Q5T1V6 TMEM63B-205ENST00000525294 916 ntTSL 220■□□□□ 0.792e-6■□□□□ 9.1
DDX59Q5T1V6 TMEM63B-208ENST00000532634 828 ntTSL 313.77□□□□□ -0.212e-6■□□□□ 9.1
DDX59Q5T1V6 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.89■□□□□ 0.617e-7■□□□□ 9.1
DDX59Q5T1V6 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.337e-7■□□□□ 9.1
DDX59Q5T1V6 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.077e-7■□□□□ 9.1
DDX59Q5T1V6 RTKN-211ENST00000640304 612 ntTSL 514.29□□□□□ -0.127e-7■□□□□ 9.1
DDX59Q5T1V6 RTKN-210ENST00000492013 853 ntTSL 211.88□□□□□ -0.517e-7■□□□□ 9.1
DDX59Q5T1V6 SSH2-211ENST00000590153 570 ntTSL 4 BASIC14.94□□□□□ -0.025e-6■□□□□ 9
DDX59Q5T1V6 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.4□□□□□ -0.15e-6■□□□□ 9
DDX59Q5T1V6 SSH2-205ENST00000577483 1630 ntTSL 1 (best)11.42□□□□□ -0.585e-6■□□□□ 9
DDX59Q5T1V6 SSH2-208ENST00000579040 965 ntTSL 1 (best)10.33□□□□□ -0.765e-6■□□□□ 9
DDX59Q5T1V6 SSH2-207ENST00000578411 633 ntTSL 210.22□□□□□ -0.775e-6■□□□□ 9
DDX59Q5T1V6 SSH2-209ENST00000579954 428 ntTSL 3 BASIC8.21□□□□□ -1.15e-6■□□□□ 9
DDX59Q5T1V6 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.465e-6■□□□□ 9
DDX59Q5T1V6 SSH2-201ENST00000269033 9327 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.465e-6■□□□□ 9
DDX59Q5T1V6 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.82■□□□□ 0.445e-12■□□□□ 9
DDX59Q5T1V6 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.41■□□□□ 0.385e-12■□□□□ 9
DDX59Q5T1V6 STX16-NPEPL1-202ENST00000530122 3433 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.35e-12■□□□□ 9
DDX59Q5T1V6 STX16-NPEPL1-201ENST00000413559 557 ntTSL 37.32□□□□□ -1.245e-12■□□□□ 9
DDX59Q5T1V6 SLC2A4RG-201ENST00000266077 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.72e-14■□□□□ 9
DDX59Q5T1V6 SLC2A4RG-204ENST00000482718 541 ntTSL 223.79■■□□□ 1.42e-14■□□□□ 9
DDX59Q5T1V6 SLC2A4RG-207ENST00000493772 1328 ntTSL 1 (best)17.6■□□□□ 0.412e-14■□□□□ 9
DDX59Q5T1V6 SLC2A4RG-202ENST00000473157 991 ntTSL 315.92■□□□□ 0.142e-14■□□□□ 9
DDX59Q5T1V6 SLC2A4RG-208ENST00000496425 502 ntTSL 215.32■□□□□ 0.042e-14■□□□□ 9
DDX59Q5T1V6 SLC2A4RG-206ENST00000491109 637 ntTSL 212.76□□□□□ -0.372e-14■□□□□ 9
DDX59Q5T1V6 GCKR-202ENST00000411584 789 ntTSL 36.66□□□□□ -1.346e-17■□□□□ 9
DDX59Q5T1V6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.62■□□□□ 0.733e-9■□□□□ 9
DDX59Q5T1V6 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.653e-9■□□□□ 9
DDX59Q5T1V6 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.33■□□□□ 0.533e-9■□□□□ 9
DDX59Q5T1V6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.53e-9■□□□□ 9
DDX59Q5T1V6 GMPPA-207ENST00000443704 1783 ntTSL 516.79■□□□□ 0.283e-9■□□□□ 9
DDX59Q5T1V6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.113e-9■□□□□ 9
DDX59Q5T1V6 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.013e-9■□□□□ 9
DDX59Q5T1V6 GMPPA-211ENST00000481170 4942 ntTSL 212.52□□□□□ -0.413e-9■□□□□ 9
DDX59Q5T1V6 GMPPA-206ENST00000435316 786 ntTSL 510.66□□□□□ -0.73e-9■□□□□ 9
DDX59Q5T1V6 GMPPA-214ENST00000635609 569 ntTSL 59.88□□□□□ -0.833e-9■□□□□ 9
DDX59Q5T1V6 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.53□□□□□ -1.841e-16■□□□□ 8.9
DDX59Q5T1V6 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC19.55■□□□□ 0.726e-8■□□□□ 8.9
DDX59Q5T1V6 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.53■□□□□ 0.566e-8■□□□□ 8.9
DDX59Q5T1V6 TPT1-AS1-220ENST00000524062 2285 ntTSL 215.93■□□□□ 0.146e-8■□□□□ 8.9
DDX59Q5T1V6 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC14.67□□□□□ -0.066e-8■□□□□ 8.9
DDX59Q5T1V6 TPT1-AS1-205ENST00000517509 3456 ntTSL 2 BASIC11.49□□□□□ -0.576e-8■□□□□ 8.9
DDX59Q5T1V6 TPT1-AS1-218ENST00000523445 856 ntTSL 5 BASIC9.19□□□□□ -0.946e-8■□□□□ 8.9
DDX59Q5T1V6 TPT1-AS1-214ENST00000521507 665 ntTSL 5 BASIC6.79□□□□□ -1.326e-8■□□□□ 8.9
DDX59Q5T1V6 TPT1-AS1-213ENST00000521336 759 ntTSL 5 BASIC6.59□□□□□ -1.356e-8■□□□□ 8.9
DDX59Q5T1V6 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.55□□□□□ -1.526e-8■□□□□ 8.9
DDX59Q5T1V6 SEPT9-218ENST00000587514 540 ntTSL 519.74■□□□□ 0.754e-8■□□□□ 8.9
DDX59Q5T1V6 SEPT9-230ENST00000590586 572 ntTSL 418.23■□□□□ 0.514e-8■□□□□ 8.9
DDX59Q5T1V6 SEPT9-223ENST00000589140 552 ntTSL 417.59■□□□□ 0.414e-8■□□□□ 8.9
DDX59Q5T1V6 SEPT9-243ENST00000592407 509 ntTSL 216.15■□□□□ 0.184e-8■□□□□ 8.9
DDX59Q5T1V6 CFL1-202ENST00000524553 860 ntTSL 2 BASIC15.27■□□□□ 0.044e-8■□□□□ 8.9
DDX59Q5T1V6 PIP5K1C-206ENST00000592530 456 ntTSL 514.29□□□□□ -0.124e-8■□□□□ 8.9
DDX59Q5T1V6 CHRD-213ENST00000482014 560 ntTSL 414.15□□□□□ -0.144e-8■□□□□ 8.9
DDX59Q5T1V6 CFL1-212ENST00000531413 636 ntTSL 3 BASIC13.22□□□□□ -0.294e-8■□□□□ 8.9
DDX59Q5T1V6 CFL1-214ENST00000534769 758 ntTSL 2 BASIC12.48□□□□□ -0.414e-8■□□□□ 8.9
DDX59Q5T1V6 AC009120.2-205ENST00000561921 490 ntTSL 3 BASIC11.42□□□□□ -0.582e-7■□□□□ 8.8
DDX59Q5T1V6 AC009120.2-203ENST00000565313 539 ntTSL 3 BASIC8.23□□□□□ -1.092e-7■□□□□ 8.8
DDX59Q5T1V6 CPSF7-214ENST00000535222 940 ntTSL 36.15□□□□□ -1.421e-15■□□□□ 8.8
DDX59Q5T1V6 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC12.36□□□□□ -0.432e-7■□□□□ 8.8
DDX59Q5T1V6 TPT1-AS1-217ENST00000522859 769 ntTSL 211.31□□□□□ -0.62e-7■□□□□ 8.8
DDX59Q5T1V6 ZC3H11A-206ENST00000453771 1892 ntTSL 510.9□□□□□ -0.662e-7■□□□□ 8.8
DDX59Q5T1V6 ZC3H11A-205ENST00000432282 682 ntTSL 58.44□□□□□ -1.062e-7■□□□□ 8.8
DDX59Q5T1V6 ZC3H11A-208ENST00000466470 944 ntTSL 28.44□□□□□ -1.062e-7■□□□□ 8.8
DDX59Q5T1V6 ZC3H11A-211ENST00000492823 447 ntTSL 38.07□□□□□ -1.122e-7■□□□□ 8.8
DDX59Q5T1V6 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.182e-7■□□□□ 8.8
DDX59Q5T1V6 ZC3H11A-207ENST00000461980 822 ntTSL 27.4□□□□□ -1.222e-7■□□□□ 8.8
DDX59Q5T1V6 TPT1-AS1-212ENST00000520924 553 ntTSL 46.67□□□□□ -1.342e-7■□□□□ 8.8
DDX59Q5T1V6 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.342e-7■□□□□ 8.8
DDX59Q5T1V6 ZC3H11A-201ENST00000332127 5015 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.372e-7■□□□□ 8.8
DDX59Q5T1V6 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.392e-7■□□□□ 8.8
DDX59Q5T1V6 ZC3H11A-213ENST00000638800 7078 ntTSL 55.28□□□□□ -1.562e-7■□□□□ 8.8
DDX59Q5T1V6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.572e-7■□□□□ 8.8
DDX59Q5T1V6 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.82e-7■□□□□ 8.8
DDX59Q5T1V6 NKD1-203ENST00000566396 748 ntTSL 312.07□□□□□ -0.486e-14■□□□□ 8.8
DDX59Q5T1V6 EIF4G2-232ENST00000640650 2724 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.972e-24■□□□□ 8.7
DDX59Q5T1V6 FP671120.1-201ENST00000623664 2498 ntTSL 2 BASIC11.66□□□□□ -0.541e-323■□□□□ 8.7
DDX59Q5T1V6 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.47e-15■□□□□ 8.7
DDX59Q5T1V6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.44□□□□□ -0.17e-15■□□□□ 8.7
DDX59Q5T1V6 SF1-211ENST00000448404 2778 ntTSL 1 (best)14.29□□□□□ -0.127e-15■□□□□ 8.7
DDX59Q5T1V6 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.167e-15■□□□□ 8.7
DDX59Q5T1V6 SF1-202ENST00000334944 3094 ntTSL 1 (best) BASIC13.69□□□□□ -0.227e-15■□□□□ 8.7
DDX59Q5T1V6 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC13.63□□□□□ -0.237e-15■□□□□ 8.7
DDX59Q5T1V6 SF1-210ENST00000443908 767 ntTSL 312.53□□□□□ -0.47e-15■□□□□ 8.7
DDX59Q5T1V6 SF1-206ENST00000413725 843 ntTSL 212.1□□□□□ -0.477e-15■□□□□ 8.7
DDX59Q5T1V6 SF1-204ENST00000377390 3470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.477e-15■□□□□ 8.7
DDX59Q5T1V6 DPH1-207ENST00000571710 2013 ntTSL 1 (best)19.39■□□□□ 0.691e-6■□□□□ 8.6
DDX59Q5T1V6 DPH1-205ENST00000570867 2265 ntTSL 218.53■□□□□ 0.561e-6■□□□□ 8.6
DDX59Q5T1V6 DPH1-202ENST00000263084 557 ntTSL 318.04■□□□□ 0.481e-6■□□□□ 8.6
DDX59Q5T1V6 DPH1-212ENST00000575162 657 ntTSL 217.98■□□□□ 0.471e-6■□□□□ 8.6
DDX59Q5T1V6 DPH1-208ENST00000572214 946 ntTSL 516.83■□□□□ 0.281e-6■□□□□ 8.6
DDX59Q5T1V6 DPH1-210ENST00000572684 2607 ntTSL 216.37■□□□□ 0.211e-6■□□□□ 8.6
DDX59Q5T1V6 MLLT6-209ENST00000620482 1556 ntTSL 1 (best)16.28■□□□□ 0.22e-12■□□□□ 8.6
DDX59Q5T1V6 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.061e-6■□□□□ 8.6
DDX59Q5T1V6 DPH1-209ENST00000572248 535 ntTSL 215.4■□□□□ 0.061e-6■□□□□ 8.6
Retrieved 100 of 7,289 protein–RNA pairs in 345.9 ms