RNA–Protein interactions for RNA: ENST00000413559.1

STX16-NPEPL1-201, Transcript of STX16-NPEPL1 readthrough (NMD candidate), humanhuman

TSL 3

Gene STX16-NPEPL1, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX16-NPEPL1-201ENST00000413559 NISCHQ9Y2I1 1504 aa16.9■□□□□ 0.3
STX16-NPEPL1-201ENST00000413559 AEBP2Q6ZN18 517 aaPredicted RBP15.04■□□□□ -0
STX16-NPEPL1-201ENST00000413559 CHIC1Q5VXU3 224 aa15□□□□□ -0.01
STX16-NPEPL1-201ENST00000413559 CCDC180Q9P1Z9 1646 aa14.8□□□□□ -0.04
STX16-NPEPL1-201ENST00000413559 ZCCHC6Q5VYS8 1495 aaKnown RBP14.18□□□□□ -0.14
STX16-NPEPL1-201ENST00000413559 DCAF1Q9Y4B6 1507 aa14.04□□□□□ -0.16
STX16-NPEPL1-201ENST00000413559 ABCC9O60706 1549 aa13.98□□□□□ -0.17
STX16-NPEPL1-201ENST00000413559 MYO15BQ96JP2 1530 aa13.93□□□□□ -0.18
STX16-NPEPL1-201ENST00000413559 DCAF8L2P0C7V8 631 aa13.82□□□□□ -0.2
STX16-NPEPL1-201ENST00000413559 NACADO15069 1562 aa13.8□□□□□ -0.2
STX16-NPEPL1-201ENST00000413559 RB1CC1Q8TDY2 1594 aa13.67□□□□□ -0.22
STX16-NPEPL1-201ENST00000413559 SHROOM4Q9ULL8 1493 aa13.56□□□□□ -0.24
STX16-NPEPL1-201ENST00000413559 SCRIBQ14160 1630 aa13.49□□□□□ -0.25
STX16-NPEPL1-201ENST00000413559 UNC13AQ9UPW8 1703 aa13.4□□□□□ -0.26
STX16-NPEPL1-201ENST00000413559 BICRAQ9NZM4 1560 aa13.3□□□□□ -0.28
STX16-NPEPL1-201ENST00000413559 PHF23Q9BUL5 403 aaPredicted RBP13.21□□□□□ -0.29
STX16-NPEPL1-201ENST00000413559 PABPN1Q86U42 306 aaKnown RBP eCLIP13.15□□□□□ -0.37e-10■■□□□ 12.6
STX16-NPEPL1-201ENST00000413559 CECR2Q9BXF3 1484 aa13.11□□□□□ -0.31
STX16-NPEPL1-201ENST00000413559 SUPT5HO00267 1087 aaKnown RBP13.1□□□□□ -0.31
STX16-NPEPL1-201ENST00000413559 RSF1Q96T23 1441 aaPredicted RBP13.06□□□□□ -0.32
STX16-NPEPL1-201ENST00000413559 BAZ1AQ9NRL2 1556 aaPredicted RBP13.04□□□□□ -0.32
STX16-NPEPL1-201ENST00000413559 MROH2BQ7Z745 1585 aa13.03□□□□□ -0.32
STX16-NPEPL1-201ENST00000413559 SMARCA4P51532 1647 aa12.99□□□□□ -0.33
STX16-NPEPL1-201ENST00000413559 PEG3Q9GZU2 1588 aa12.91□□□□□ -0.34
STX16-NPEPL1-201ENST00000413559 WIZO95785 1651 aa12.89□□□□□ -0.35
STX16-NPEPL1-201ENST00000413559 EIF4G1Q04637 1599 aaKnown RBP12.87□□□□□ -0.35
STX16-NPEPL1-201ENST00000413559 ATAD2BQ9ULI0 1458 aa12.82□□□□□ -0.36
STX16-NPEPL1-201ENST00000413559 SMARCA2P51531 1590 aa12.8□□□□□ -0.36
STX16-NPEPL1-201ENST00000413559 TOP2AP11388 1531 aaKnown RBP12.79□□□□□ -0.36
STX16-NPEPL1-201ENST00000413559 SENP3Q9H4L4 574 aaPredicted RBP12.77□□□□□ -0.37
STX16-NPEPL1-201ENST00000413559 NCAPD3P42695 1498 aa12.76□□□□□ -0.37
STX16-NPEPL1-201ENST00000413559 HMGXB3Q12766 1538 aa12.72□□□□□ -0.37
STX16-NPEPL1-201ENST00000413559 BAZ1BQ9UIG0 1483 aaKnown RBP12.7□□□□□ -0.38
STX16-NPEPL1-201ENST00000413559 CC2D2AQ9P2K1 1620 aa12.7□□□□□ -0.38
STX16-NPEPL1-201ENST00000413559 CCDC88BA6NC98 1476 aa12.65□□□□□ -0.38
STX16-NPEPL1-201ENST00000413559 DNAJC5BQ9UF47 199 aa12.47□□□□□ -0.41
STX16-NPEPL1-201ENST00000413559 CFTRP13569 1480 aa12.43□□□□□ -0.42
STX16-NPEPL1-201ENST00000413559 CADPSQ9ULU8 1353 aa12.39□□□□□ -0.43
STX16-NPEPL1-201ENST00000413559 PRDM2Q13029 1718 aa12.35□□□□□ -0.43
STX16-NPEPL1-201ENST00000413559 TRIM41Q8WV44 630 aa12.34□□□□□ -0.43
STX16-NPEPL1-201ENST00000413559 PLPPR3Q6T4P5 718 aa12.33□□□□□ -0.44
STX16-NPEPL1-201ENST00000413559 LAMC3Q9Y6N6 1575 aa12.3□□□□□ -0.44
STX16-NPEPL1-201ENST00000413559 HRCP23327 699 aa12.3□□□□□ -0.44
STX16-NPEPL1-201ENST00000413559 ABCC8Q09428 1581 aa12.3□□□□□ -0.44
STX16-NPEPL1-201ENST00000413559 NESP48681 1621 aa12.27□□□□□ -0.44
STX16-NPEPL1-201ENST00000413559 LOC105371045A0A1W2PR82 267 aa12.27□□□□□ -0.45
STX16-NPEPL1-201ENST00000413559 WRNQ14191 1432 aaPredicted RBP eCLIP12.27□□□□□ -0.45
STX16-NPEPL1-201ENST00000413559 PCGF6Q9BYE7 350 aa12.23□□□□□ -0.45
STX16-NPEPL1-201ENST00000413559 SYNJ1O43426 1573 aa12.22□□□□□ -0.45
STX16-NPEPL1-201ENST00000413559 FANCD2Q9BXW9 1451 aa12.22□□□□□ -0.45
STX16-NPEPL1-201ENST00000413559 TOP2BQ02880 1626 aa12.21□□□□□ -0.46
STX16-NPEPL1-201ENST00000413559 BIVM-ERCC5R4GMW8 1640 aa12.21□□□□□ -0.46
STX16-NPEPL1-201ENST00000413559 PDS5BQ9NTI5 1447 aa12.2□□□□□ -0.46
STX16-NPEPL1-201ENST00000413559 TRIM26Q12899 539 aaPredicted RBP12.19□□□□□ -0.46
STX16-NPEPL1-201ENST00000413559 CUX1P39880 1505 aa12.19□□□□□ -0.46
STX16-NPEPL1-201ENST00000413559 CEP164Q9UPV0 1460 aa12.14□□□□□ -0.47
STX16-NPEPL1-201ENST00000413559 KIF21AQ7Z4S6 1674 aa12.13□□□□□ -0.47
STX16-NPEPL1-201ENST00000413559 DNMBPQ6XZF7 1577 aa12.11□□□□□ -0.47
STX16-NPEPL1-201ENST00000413559 URB2Q14146 1524 aaKnown RBP12.1□□□□□ -0.47
STX16-NPEPL1-201ENST00000413559 TOPBP1Q92547 1522 aa12.1□□□□□ -0.47
STX16-NPEPL1-201ENST00000413559 EEA1Q15075 1411 aa12.08□□□□□ -0.48
STX16-NPEPL1-201ENST00000413559 SOGA1O94964 1423 aa12.07□□□□□ -0.48
STX16-NPEPL1-201ENST00000413559 FAM9AQ8IZU1 332 aaPredicted RBP12.06□□□□□ -0.48
STX16-NPEPL1-201ENST00000413559 FGD5Q6ZNL6 1462 aa12.05□□□□□ -0.48
STX16-NPEPL1-201ENST00000413559 MRC2Q9UBG0 1479 aa12.04□□□□□ -0.48
STX16-NPEPL1-201ENST00000413559 RUSC2Q8N2Y8 1516 aa12.04□□□□□ -0.48
STX16-NPEPL1-201ENST00000413559 ZEB1P37275 1124 aaPredicted RBP12.03□□□□□ -0.48
STX16-NPEPL1-201ENST00000413559 POLA1P09884 1462 aaPredicted RBP12.02□□□□□ -0.48
STX16-NPEPL1-201ENST00000413559 WDR62O43379 1518 aa12.01□□□□□ -0.49
STX16-NPEPL1-201ENST00000413559 CSRNP3Q8WYN3 585 aa11.99□□□□□ -0.49
STX16-NPEPL1-201ENST00000413559 THOC2Q8NI27 1593 aaKnown RBP11.99□□□□□ -0.49
STX16-NPEPL1-201ENST00000413559 ABCA10Q8WWZ4 1543 aa11.98□□□□□ -0.49
STX16-NPEPL1-201ENST00000413559 ERCC6Q03468 1493 aa11.97□□□□□ -0.49
STX16-NPEPL1-201ENST00000413559 RAD54L2Q9Y4B4 1467 aa11.96□□□□□ -0.49
STX16-NPEPL1-201ENST00000413559 KIF27Q86VH2 1401 aa11.96□□□□□ -0.49
STX16-NPEPL1-201ENST00000413559 WDR97A6NE52 1622 aa11.95□□□□□ -0.5
STX16-NPEPL1-201ENST00000413559 CUX2O14529 1486 aa11.95□□□□□ -0.5
STX16-NPEPL1-201ENST00000413559 TARBP1Q13395 1621 aaKnown RBP11.94□□□□□ -0.5
STX16-NPEPL1-201ENST00000413559 KIF21BO75037 1637 aa11.92□□□□□ -0.5
STX16-NPEPL1-201ENST00000413559 IGF1RP08069 1367 aa11.92□□□□□ -0.5
STX16-NPEPL1-201ENST00000413559 TNIKQ9UKE5 1360 aa11.92□□□□□ -0.5
STX16-NPEPL1-201ENST00000413559 PRXQ9BXM0 1461 aa11.91□□□□□ -0.5
STX16-NPEPL1-201ENST00000413559 IFT140Q96RY7 1462 aa11.89□□□□□ -0.51
STX16-NPEPL1-201ENST00000413559 ABCA5Q8WWZ7 1642 aa11.89□□□□□ -0.51
STX16-NPEPL1-201ENST00000413559 GOLGA3Q08378 1498 aa11.88□□□□□ -0.51
STX16-NPEPL1-201ENST00000413559 ERICH3Q5RHP9 1530 aa11.86□□□□□ -0.51
STX16-NPEPL1-201ENST00000413559 CEP162Q5TB80 1403 aa11.86□□□□□ -0.51
STX16-NPEPL1-201ENST00000413559 GAPVD1Q14C86 1478 aa11.84□□□□□ -0.51
STX16-NPEPL1-201ENST00000413559 TDRD9Q8NDG6 1382 aaKnown RBP11.84□□□□□ -0.51
STX16-NPEPL1-201ENST00000413559 RAPGEF2Q9Y4G8 1499 aa11.83□□□□□ -0.52
STX16-NPEPL1-201ENST00000413559 PPARGC1BQ86YN6 1023 aaKnown RBP11.83□□□□□ -0.52
STX16-NPEPL1-201ENST00000413559 CARMIL1Q5VZK9 1371 aa11.82□□□□□ -0.52
STX16-NPEPL1-201ENST00000413559 EHMT2Q96KQ7 1210 aa11.82□□□□□ -0.52
STX16-NPEPL1-201ENST00000413559 CUL7Q14999 1698 aa11.81□□□□□ -0.52
STX16-NPEPL1-201ENST00000413559 ZNF608Q9ULD9 1512 aaPredicted RBP11.81□□□□□ -0.52
STX16-NPEPL1-201ENST00000413559 AQRO60306 1485 aaKnown RBP eCLIP11.79□□□□□ -0.525e-7■■■■■ 33.7
STX16-NPEPL1-201ENST00000413559 FOXD1Q16676 465 aa11.79□□□□□ -0.52
STX16-NPEPL1-201ENST00000413559 PBRM1Q86U86 1689 aa11.78□□□□□ -0.52
STX16-NPEPL1-201ENST00000413559 GRIN2BQ13224 1484 aa11.77□□□□□ -0.52
STX16-NPEPL1-201ENST00000413559 EIF4G3O43432 1585 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms