RNA–Protein interactions for RNA: ENST00000540801.5

SSH2-204, Transcript of slingshot protein phosphatase 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH2, Length 4,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH2-204ENST00000540801 NISCHQ9Y2I1 1504 aa13.77□□□□□ -0.21
SSH2-204ENST00000540801 SHROOM4Q9ULL8 1493 aa11.7□□□□□ -0.54
SSH2-204ENST00000540801 ZCCHC6Q5VYS8 1495 aaKnown RBP11.68□□□□□ -0.54
SSH2-204ENST00000540801 CCDC180Q9P1Z9 1646 aa11.66□□□□□ -0.54
SSH2-204ENST00000540801 MYO15BQ96JP2 1530 aa11.49□□□□□ -0.57
SSH2-204ENST00000540801 SUPT5HO00267 1087 aaKnown RBP11.23□□□□□ -0.61
SSH2-204ENST00000540801 DCAF1Q9Y4B6 1507 aa11.18□□□□□ -0.62
SSH2-204ENST00000540801 CHIC1Q5VXU3 224 aa11.07□□□□□ -0.64
SSH2-204ENST00000540801 SCRIBQ14160 1630 aa11.05□□□□□ -0.64
SSH2-204ENST00000540801 ABCC9O60706 1549 aa11.03□□□□□ -0.64
SSH2-204ENST00000540801 DCAF8L2P0C7V8 631 aa11.02□□□□□ -0.65
SSH2-204ENST00000540801 UNC13AQ9UPW8 1703 aa11□□□□□ -0.65
SSH2-204ENST00000540801 RB1CC1Q8TDY2 1594 aa10.98□□□□□ -0.65
SSH2-204ENST00000540801 CECR2Q9BXF3 1484 aa10.96□□□□□ -0.65
SSH2-204ENST00000540801 RSF1Q96T23 1441 aaPredicted RBP10.92□□□□□ -0.66
SSH2-204ENST00000540801 LOC105371045A0A1W2PR82 267 aa10.88□□□□□ -0.67
SSH2-204ENST00000540801 WIZO95785 1651 aa10.88□□□□□ -0.67
SSH2-204ENST00000540801 MROH2BQ7Z745 1585 aa10.87□□□□□ -0.67
SSH2-204ENST00000540801 EIF4G1Q04637 1599 aaKnown RBP10.87□□□□□ -0.67
SSH2-204ENST00000540801 BICRAQ9NZM4 1560 aa10.7□□□□□ -0.7
SSH2-204ENST00000540801 NACADO15069 1562 aa10.7□□□□□ -0.7
SSH2-204ENST00000540801 PPARGC1BQ86YN6 1023 aaKnown RBP10.68□□□□□ -0.7
SSH2-204ENST00000540801 BAZ1AQ9NRL2 1556 aaPredicted RBP10.59□□□□□ -0.71
SSH2-204ENST00000540801 ABCC8Q09428 1581 aa10.58□□□□□ -0.72
SSH2-204ENST00000540801 SMARCA4P51532 1647 aa10.54□□□□□ -0.72
SSH2-204ENST00000540801 PCGF6Q9BYE7 350 aa10.54□□□□□ -0.72
SSH2-204ENST00000540801 SMARCA2P51531 1590 aa10.53□□□□□ -0.72
SSH2-204ENST00000540801 RUSC2Q8N2Y8 1516 aa10.53□□□□□ -0.72
SSH2-204ENST00000540801 HRCP23327 699 aa10.5□□□□□ -0.73
SSH2-204ENST00000540801 CCDC88BA6NC98 1476 aa10.5□□□□□ -0.73
SSH2-204ENST00000540801 EHMT2Q96KQ7 1210 aa10.42□□□□□ -0.74
SSH2-204ENST00000540801 TOP2AP11388 1531 aaKnown RBP10.41□□□□□ -0.74
SSH2-204ENST00000540801 FAM9AQ8IZU1 332 aaPredicted RBP10.4□□□□□ -0.75
SSH2-204ENST00000540801 SOGA1O94964 1423 aa10.39□□□□□ -0.75
SSH2-204ENST00000540801 PABPN1Q86U42 306 aaKnown RBP eCLIP10.37□□□□□ -0.75
SSH2-204ENST00000540801 SYNJ1O43426 1573 aa10.36□□□□□ -0.75
SSH2-204ENST00000540801 PEG3Q9GZU2 1588 aa10.36□□□□□ -0.75
SSH2-204ENST00000540801 TRIM41Q8WV44 630 aa10.28□□□□□ -0.76
SSH2-204ENST00000540801 ATAD2BQ9ULI0 1458 aa10.21□□□□□ -0.77
SSH2-204ENST00000540801 TRIM26Q12899 539 aaPredicted RBP10.15□□□□□ -0.78
SSH2-204ENST00000540801 DNAJC5BQ9UF47 199 aa10.11□□□□□ -0.79
SSH2-204ENST00000540801 RAPGEF2Q9Y4G8 1499 aa10.09□□□□□ -0.79
SSH2-204ENST00000540801 CEP162Q5TB80 1403 aa10.09□□□□□ -0.79
SSH2-204ENST00000540801 BIVM-ERCC5R4GMW8 1640 aa10.09□□□□□ -0.79
SSH2-204ENST00000540801 CUX1P39880 1505 aa10.08□□□□□ -0.8
SSH2-204ENST00000540801 TOP2BQ02880 1626 aa10.06□□□□□ -0.8
SSH2-204ENST00000540801 WRNQ14191 1432 aaPredicted RBP eCLIP10.06□□□□□ -0.8
SSH2-204ENST00000540801 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.02□□□□□ -0.81
SSH2-204ENST00000540801 KIF21BO75037 1637 aa10.02□□□□□ -0.81
SSH2-204ENST00000540801 TTBK1Q5TCY1 1321 aaPredicted RBP10.01□□□□□ -0.81
SSH2-204ENST00000540801 BAZ1BQ9UIG0 1483 aaKnown RBP9.99□□□□□ -0.81
SSH2-204ENST00000540801 LRRIQ1Q96JM4 1722 aa9.99□□□□□ -0.81
SSH2-204ENST00000540801 PRDM2Q13029 1718 aa9.98□□□□□ -0.81
SSH2-204ENST00000540801 TNIKQ9UKE5 1360 aa9.97□□□□□ -0.81
SSH2-204ENST00000540801 ARAP1Q96P48 1450 aa9.96□□□□□ -0.81
SSH2-204ENST00000540801 PRXQ9BXM0 1461 aa9.94□□□□□ -0.82
SSH2-204ENST00000540801 NCAPD3P42695 1498 aa9.93□□□□□ -0.82
SSH2-204ENST00000540801 CLIP1P30622 1438 aa9.93□□□□□ -0.82
SSH2-204ENST00000540801 HMGXB3Q12766 1538 aa9.93□□□□□ -0.82
SSH2-204ENST00000540801 CSRNP3Q8WYN3 585 aa9.92□□□□□ -0.82
SSH2-204ENST00000540801 CFTRP13569 1480 aa9.9□□□□□ -0.82
SSH2-204ENST00000540801 NESP48681 1621 aa9.89□□□□□ -0.83
SSH2-204ENST00000540801 CC2D2AQ9P2K1 1620 aa9.88□□□□□ -0.83
SSH2-204ENST00000540801 KANK4Q5T7N3 995 aaPredicted RBP9.88□□□□□ -0.83
SSH2-204ENST00000540801 SCAF1Q9H7N4 1312 aaKnown RBP9.88□□□□□ -0.83
SSH2-204ENST00000540801 GOLGA3Q08378 1498 aa9.87□□□□□ -0.83
SSH2-204ENST00000540801 ARHGAP35Q9NRY4 1499 aa9.84□□□□□ -0.84
SSH2-204ENST00000540801 WDR97A6NE52 1622 aa9.83□□□□□ -0.84
SSH2-204ENST00000540801 CEP164Q9UPV0 1460 aa9.81□□□□□ -0.84
SSH2-204ENST00000540801 VPS8Q8N3P4 1428 aa9.79□□□□□ -0.84
SSH2-204ENST00000540801 ERICH3Q5RHP9 1530 aa9.78□□□□□ -0.84
SSH2-204ENST00000540801 RAD54L2Q9Y4B4 1467 aa9.77□□□□□ -0.85
SSH2-204ENST00000540801 EEA1Q15075 1411 aa9.76□□□□□ -0.85
SSH2-204ENST00000540801 IGF1RP08069 1367 aa9.76□□□□□ -0.85
SSH2-204ENST00000540801 RANGAP1P46060 587 aaPredicted RBP9.75□□□□□ -0.85
SSH2-204ENST00000540801 KIF21AQ7Z4S6 1674 aa9.75□□□□□ -0.85
SSH2-204ENST00000540801 FGD5Q6ZNL6 1462 aa9.74□□□□□ -0.85
SSH2-204ENST00000540801 MAPKBP1O60336 1514 aa9.73□□□□□ -0.85
SSH2-204ENST00000540801 URB2Q14146 1524 aaKnown RBP9.72□□□□□ -0.85
SSH2-204ENST00000540801 NEUROD1Q13562 356 aa9.72□□□□□ -0.85
SSH2-204ENST00000540801 UBTFP17480 764 aaKnown RBP9.72□□□□□ -0.85
SSH2-204ENST00000540801 PCF11O94913 1555 aaKnown RBP9.69□□□□□ -0.86
SSH2-204ENST00000540801 MAGI3Q5TCQ9 1506 aa9.69□□□□□ -0.86
SSH2-204ENST00000540801 POLA1P09884 1462 aaPredicted RBP9.68□□□□□ -0.86
SSH2-204ENST00000540801 DENND4BO75064 1496 aaPredicted RBP9.68□□□□□ -0.86
SSH2-204ENST00000540801 DHX57Q6P158 1386 aaKnown RBP9.67□□□□□ -0.86
SSH2-204ENST00000540801 TARBP1Q13395 1621 aaKnown RBP9.66□□□□□ -0.86
SSH2-204ENST00000540801 ABCA5Q8WWZ7 1642 aa9.66□□□□□ -0.86
SSH2-204ENST00000540801 CADPSQ9ULU8 1353 aa9.66□□□□□ -0.86
SSH2-204ENST00000540801 HNRNPUL2Q1KMD3 747 aaKnown RBP9.66□□□□□ -0.86
SSH2-204ENST00000540801 KDM5BQ9UGL1 1544 aa9.65□□□□□ -0.86
SSH2-204ENST00000540801 CFAP43Q8NDM7 1665 aa9.65□□□□□ -0.86
SSH2-204ENST00000540801 TOPBP1Q92547 1522 aa9.65□□□□□ -0.86
SSH2-204ENST00000540801 PTPRKQ15262 1439 aa9.65□□□□□ -0.86
SSH2-204ENST00000540801 RRBP1Q9P2E9 1410 aaKnown RBP9.65□□□□□ -0.86
SSH2-204ENST00000540801 KDM6BO15054 1643 aa9.65□□□□□ -0.86
SSH2-204ENST00000540801 PHLDB1Q86UU1 1377 aa9.65□□□□□ -0.86
SSH2-204ENST00000540801 CUX2O14529 1486 aa9.65□□□□□ -0.87
SSH2-204ENST00000540801 TIAM1Q13009 1591 aa9.64□□□□□ -0.87
SSH2-204ENST00000540801 CTTNBP2Q8WZ74 1663 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms